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MF668286.1__ASZ75042.1__SEA_TRINA_264__00231

Bact-Vir

MF668286.1__ASZ75042.1__SEA_TRINA_264__00231

Identity

Accession:
MF668286 ↗
Kingdom:
phage

Quality

93.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-93
PDB
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.72 50.0 4.66e-01 72.5% 75.2%
1sbkA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.69 58.0 5.05e-01 91.2% 97.1%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.67 51.0 4.06e-01 81.3% 44.5%
3nctA00 3.40.50.11880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Plasmid SOS inhibition protein 0.65 57.0 5.00e-01 100.0% 64.2%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 44.0 3.94e-01 70.3% 96.1%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 47.0 3.16e-01 78.0% 46.3%
2wzoA01 3.30.160.360 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 50.0 4.43e-01 84.6% 80.5%
3f14A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 45.0 4.19e-01 72.5% 99.1%
4fwwA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 50.0 3.23e-01 86.8% 48.2%
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 48.0 4.24e-01 80.2% 95.4%
3qszA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 55.0 4.42e-01 95.6% 74.6%
3rwxA01 2.40.128.340 Mainly Beta › Beta Barrel › Lipocalin › 0.63 50.0 4.63e-01 87.9% 97.5%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 45.0 4.16e-01 75.8% 62.7%
3d6xB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 48.0 4.23e-01 85.7% 95.7%
4amwA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.61 48.0 3.26e-01 83.5% 42.5%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.61 50.0 3.36e-01 92.3% 89.0%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 42.0 3.84e-01 72.5% 96.0%
4innA00 2.40.128.520 Mainly Beta › Beta Barrel › Lipocalin › 0.59 50.0 4.35e-01 95.6% 91.1%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 40.0 3.83e-01 72.5% 75.7%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.58 49.0 3.99e-01 98.9% 48.0%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 41.0 3.66e-01 72.5% 81.2%
2yh9B00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.57 29.0 3.37e-01 81.3% 66.2%
5i4nA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 45.0 4.54e-01 84.6% 89.1%
3nqnA00 3.30.530.70 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › Uncharacterised protein PF12723, DUF3809 0.57 49.0 4.22e-01 97.8% 76.2%
1ir3A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 45.0 4.47e-01 84.6% 85.3%
4gzvA00 2.40.128.490 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 0.57 47.0 4.12e-01 92.3% 92.1%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 40.0 3.64e-01 73.6% 100.0%
2pgwA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 39.0 3.38e-01 72.5% 92.0%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 48.0 4.06e-01 96.7% 78.8%
1dfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 47.0 3.82e-01 92.3% 70.5%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.56 39.0 3.36e-01 73.6% 85.8%
3akhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 46.0 3.26e-01 93.4% 91.6%
2joxA00 2.60.40.4240 Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill 0.55 42.0 4.04e-01 80.2% 84.9%
4it1B01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 38.0 3.30e-01 72.5% 93.5%
2oktA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 38.0 3.45e-01 72.5% 94.5%
3d9wA02 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.55 38.0 3.71e-01 72.5% 78.4%
4j0xA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.14e-01 95.6% 92.3%
2oqhA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 38.0 3.54e-01 72.5% 90.4%
6x1kA01 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.54 46.0 4.32e-01 96.7% 97.4%
3vfcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 38.0 3.22e-01 71.4% 87.9%
3i2nA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 42.0 2.91e-01 86.8% 49.3%
2og9A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 37.0 3.31e-01 71.4% 86.2%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 41.0 2.96e-01 84.6% 41.0%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 47.0 3.10e-01 97.8% 35.4%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.53 48.0 4.36e-01 98.9% 98.3%
4lgvD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 42.0 3.08e-01 89.0% 78.9%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 42.0 4.09e-01 92.3% 87.5%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3514476 220.1.1.27 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.71 50.0 3.97e-01 72.5% 49.7%
3955147 222.1.1.17 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.70 54.0 4.66e-01 81.3% 91.4%
4498032 9.1.1.12 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.69 58.0 4.38e-01 91.2% 81.7%
4948946 3425.2.1.0 a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain 0.67 51.0 3.79e-01 79.1% 56.3%
3937047 9.1.1.55 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7045 0.65 52.0 4.78e-01 86.8% 95.8%
3266025 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.65 52.0 3.77e-01 89.0% 50.4%
3587716 3425.2.1.2 a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain › YycI 0.64 50.0 3.62e-01 81.3% 96.1%
3230977 4099.1.1.48 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Rgr-1_C 0.64 56.0 5.04e-01 100.0% 91.5%
None 0.64 51.0 3.04e-01 86.8% 33.1%
3931298 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.64 56.0 5.09e-01 100.0% 88.8%
3866991 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.63 51.0 3.18e-01 86.8% 45.0%
3953609 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.63 48.0 4.43e-01 79.1% 96.5%
3604446 2004.1.1.480 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 0.63 50.0 2.97e-01 83.5% 21.5%
3939474 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 50.0 4.28e-01 85.7% 100.0%
3698492 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.63 53.0 4.80e-01 93.4% 82.4%
4560955 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.62 55.0 4.07e-01 95.6% 63.5%
185158 3518.1.1.1 a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind 0.62 49.0 3.97e-01 84.6% 60.6%
3784905 4099.1.1.5 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Csm1 0.62 50.0 4.53e-01 89.0% 80.8%
3170663 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.61 48.0 3.23e-01 83.5% 46.4%
4984958 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.61 47.0 3.16e-01 82.4% 34.6%
3441153 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 45.0 2.98e-01 80.2% 41.4%
3280448 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.60 46.0 3.29e-01 82.4% 99.6%
3704543 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.60 51.0 3.66e-01 92.3% 64.5%
3417002 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 50.0 4.63e-01 92.3% 88.3%
5048322 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.60 44.0 3.48e-01 76.9% 90.8%
3291057 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 41.0 4.56e-01 70.3% 100.0%
3488366 5.1.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.60 45.0 3.76e-01 79.1% 94.8%
4023469 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.60 53.0 4.62e-01 100.0% 77.1%
4238255 331.22.1.2 a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 0.59 50.0 3.97e-01 94.5% 48.7%
4012684 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 45.0 3.02e-01 82.4% 43.3%
3883680 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.59 51.0 3.22e-01 95.6% 48.6%
3596957 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 48.0 3.60e-01 92.3% 68.3%
3699899 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.58 50.0 4.62e-01 97.8% 78.3%
3945044 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.57 49.0 4.39e-01 100.0% 91.4%
398027 331.3.1.15 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3809 0.57 50.0 4.32e-01 100.0% 76.7%
3190697 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.57 44.0 3.30e-01 81.3% 41.8%
3599539 11.8.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.57 50.0 4.16e-01 100.0% 86.7%
3749496 5.1.3.99 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FG-GAP_3 0.57 50.0 3.21e-01 97.8% 27.7%
1094910 243.1.1.21 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3828 0.57 40.0 3.64e-01 73.6% 100.0%
3412753 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 46.0 3.06e-01 89.0% 89.7%
4961667 5084.1.1.45 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF26421 0.56 47.0 4.39e-01 94.5% 100.0%
3704313 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.56 48.0 4.32e-01 94.5% 68.0%
4302400 5.1.7.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.56 44.0 2.74e-01 84.6% 23.0%
3278140 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.56 40.0 3.78e-01 75.8% 99.1%
2715752 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.55 46.0 4.25e-01 96.7% 92.7%
5007504 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.54 41.0 2.94e-01 80.2% 29.1%
3257765 331.3.1.7 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.54 47.0 3.89e-01 100.0% 71.8%
3747707 304.53.1.0 a+b two layers › Alpha-beta plaits › DOPA dioxygenase-like › DOPA dioxygenase-like 0.53 46.0 3.74e-01 94.5% 80.0%
3494266 331.4.1.5 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1_BRSK 0.53 46.0 4.19e-01 96.7% 89.2%
3481723 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.52 41.0 3.85e-01 84.6% 76.5%
3867284 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 45.0 2.79e-01 100.0% 16.4%
3613827 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 44.0 2.89e-01 97.8% 44.0%
3904452 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 46.0 4.24e-01 100.0% 77.4%
3400513 77.1.1.4 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Chitin_bind_4 0.51 41.0 4.45e-01 87.9% 100.0%
3717097 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.51 44.0 2.80e-01 97.8% 46.3%
3940934 4023.1.1.0 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.51 37.0 3.68e-01 78.0% 73.7%
3535970 304.44.1.0 a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 0.51 45.0 3.59e-01 96.7% 77.8%
3603190 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 44.0 2.66e-01 95.6% 44.5%
3807468 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.50 42.0 3.16e-01 91.2% 64.0%