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MF754114.1__ATI19275.1__KF4_062__00062

Bact-Vir

MF754114.1__ATI19275.1__KF4_062__00062

Identity

Accession:
MF754114 ↗
Kingdom:
phage

Quality

65.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mardecavirus› Vibrio_phage_vB_VpaS_KF4

TaxID: 2041475

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-81
PDB
Domain cluster: rep: IMGVR_UViG_3300025322_000015-3300025322-Ga0209641_1000006480__D4-63
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vb5A01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.63 43.0 4.07e-01 70.1% 96.8%
3u66A00 1.25.40.590 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU 0.61 42.0 3.33e-01 72.7% 42.3%
4hhxA00 1.20.81.30 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F 0.58 51.0 4.67e-01 100.0% 93.3%
3pvuA02 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.58 45.0 4.48e-01 84.4% 81.2%
1txuA02 1.20.1050.80 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › VPS9 domain 0.58 41.0 3.32e-01 75.3% 55.0%
2kmfA01 1.20.58.810 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 0.56 44.0 4.06e-01 85.7% 88.2%
4ksaA02 1.20.140.90 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain 0.56 42.0 3.47e-01 79.2% 86.9%
4u5qB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 46.0 2.97e-01 98.7% 55.2%
3he0B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 43.0 3.40e-01 90.9% 68.5%
1nklA00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.53 40.0 3.99e-01 96.1% 83.3%
6fhpD00 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.52 38.0 4.18e-01 88.3% 98.4%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5046134 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 44.0 3.62e-01 71.4% 79.3%
3619577 192.5.1.0 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.61 49.0 4.64e-01 87.0% 98.9%
4634618 170.1.1.25 ↗ alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › PNMA 0.60 46.0 4.06e-01 80.5% 77.3%
3763289 304.24.1.29 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › PNMA 0.60 46.0 4.04e-01 80.5% 77.3%
3569143 170.2.1.28 ↗ alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › PNMA 0.58 46.0 4.07e-01 84.4% 80.0%
3545942 5.1.11.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 0.58 43.0 2.75e-01 79.2% 39.5%
3283630 601.7.1.18 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN_SAV_6107 0.56 37.0 3.32e-01 89.6% 47.3%
3396075 198.1.1.2 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.56 42.0 4.18e-01 97.4% 78.8%
4873837 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.55 40.0 3.95e-01 87.0% 69.0%
3277060 198.1.1.2 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.55 41.0 4.17e-01 97.4% 82.7%
3263245 198.1.1.1 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 0.54 40.0 4.04e-01 97.4% 79.5%
4019009 109.4.1.777 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 37.0 3.16e-01 71.4% 43.1%
3437761 109.4.1.23 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › B56 0.54 37.0 2.91e-01 72.7% 60.0%
3980912 601.4.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.53 44.0 3.87e-01 92.2% 95.7%
3514113 170.1.1.0 ↗ alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C 0.53 39.0 3.93e-01 90.9% 75.0%
3936660 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.51 41.0 4.02e-01 98.7% 82.4%
3582620 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 39.0 2.95e-01 83.1% 45.1%
D2 high residues 106-178
PDB
D3 high residues 242-300
PDB
D4 high residues 330-382
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4usaA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.77 62.0 4.85e-01 92.5% 45.4%
2bl0C01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.75 58.0 5.11e-01 83.0% 78.7%
1t33A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.73 54.0 3.84e-01 79.2% 32.3%
1k78I00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 54.0 5.32e-01 81.1% 81.0%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.68e-01 100.0% 94.7%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.36e-01 96.2% 81.7%
2p1aB01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.72 52.0 3.81e-01 77.4% 65.8%
1gt0D00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.71 46.0 4.03e-01 71.7% 44.3%
4dbgB02 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.70 47.0 4.48e-01 73.6% 60.7%
2j16A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.69 54.0 4.17e-01 92.5% 37.6%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 5.16e-01 90.6% 79.4%
4heoA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.68 43.0 4.25e-01 79.2% 61.8%
2reoA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 56.0 3.75e-01 92.5% 79.2%
3emuA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.68 57.0 4.27e-01 100.0% 37.5%
1g2rA00 3.30.1230.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like 0.67 58.0 4.82e-01 98.1% 75.5%
2blfB01 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.67 53.0 5.08e-01 88.7% 87.3%
3fy4C03 1.10.579.10 Mainly Alpha › Orthogonal Bundle › DNA Cyclobutane Dipyrimidine Photolyase, subunit A; domain 3 › DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 0.67 55.0 3.75e-01 98.1% 63.2%
5x2bD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 54.0 3.45e-01 92.5% 68.8%
6tmfT00 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.66 58.0 5.50e-01 100.0% 89.1%
2zm5B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 51.0 3.30e-01 92.5% 19.1%
3bbzA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.66 39.0 4.08e-01 71.7% 64.6%
2nt2A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.66 51.0 3.92e-01 92.5% 35.2%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 56.0 5.02e-01 100.0% 97.4%
3nb0B02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.66 47.0 3.06e-01 77.4% 33.6%
3tmmA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.66 43.0 3.46e-01 71.7% 33.0%
2gs4A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.65 50.0 3.56e-01 83.0% 72.2%
3g2eB00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.65 52.0 3.71e-01 96.2% 29.2%
2lefA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.64 45.0 3.89e-01 75.5% 75.6%
3m03B00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 52.0 4.40e-01 96.2% 52.6%
2qytA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.64 45.0 3.81e-01 79.2% 64.4%
1q1qA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 53.0 3.37e-01 98.1% 68.0%
4gf0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.62 47.0 3.71e-01 83.0% 38.9%
2vkjA00 1.20.58.2030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 49.0 4.09e-01 100.0% 47.2%
4i8oA03 1.10.8.1130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial toxin RNase RnlA/LsoA, C-terminal Dmd-binding domain 0.62 43.0 4.00e-01 75.5% 56.7%
2g6zA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 48.0 3.70e-01 96.2% 34.0%
2vxdA00 1.10.10.2100 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain 0.60 45.0 4.57e-01 88.7% 96.3%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.60 38.0 3.77e-01 75.5% 61.8%
4dccA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 44.0 4.05e-01 86.8% 79.7%
2el7A02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.57 45.0 3.89e-01 94.3% 92.6%
3a06B03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.57 50.0 4.25e-01 100.0% 78.4%
3qhbA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 50.0 3.49e-01 100.0% 79.9%
1yuzB01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.56 49.0 3.68e-01 100.0% 91.3%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.56 49.0 3.60e-01 100.0% 90.6%
2elcA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.56 48.0 4.49e-01 100.0% 77.6%
2chpA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.56 49.0 3.59e-01 100.0% 91.2%
3u9rB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.55 38.0 2.54e-01 77.4% 18.6%
4l6v600 1.10.8.110 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Photosystem I, reaction centre, subunit PsaF 0.54 41.0 3.10e-01 81.1% 40.0%
1uujA00 1.20.960.30 Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › 0.54 43.0 3.98e-01 98.1% 71.1%
1oksA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.54 47.0 4.75e-01 94.3% 96.2%
1ak2A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 43.0 2.95e-01 96.2% 82.3%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 42.0 3.80e-01 98.1% 86.4%
3e74A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 41.0 2.57e-01 92.5% 22.0%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4609007 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.83 69.0 7.15e-01 90.6% 100.0%
4025261 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 72.0 5.69e-01 98.1% 53.6%
3342850 592.7.1.0 ↗ alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain 0.83 67.0 5.86e-01 86.8% 74.7%
3600801 1091.1.1.0 ↗ alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 0.79 66.0 6.07e-01 94.3% 77.1%
5011654 101.1.2.374 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.79 65.0 6.01e-01 92.5% 79.7%
3631439 592.7.1.0 ↗ alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain 0.79 71.0 5.79e-01 100.0% 67.4%
3204035 1.1.17.4 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 0.78 49.0 2.93e-01 100.0% 10.0%
3441767 4133.1.1.2 ↗ alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 0.78 70.0 4.42e-01 100.0% 22.0%
3712603 1091.1.1.1 ↗ alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › Ribosomal_60s 0.78 65.0 5.96e-01 94.3% 77.1%
4362811 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 62.0 6.17e-01 90.6% 100.0%
4189431 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 62.0 6.18e-01 90.6% 100.0%
3881313 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 62.0 5.85e-01 90.6% 81.5%
3252439 198.1.1.10 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin 0.76 60.0 5.26e-01 86.8% 76.2%
4978129 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.76 63.0 3.73e-01 96.2% 12.9%
3455407 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 61.0 6.06e-01 90.6% 98.2%
3890613 101.1.2.698 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27079 0.75 61.0 5.81e-01 92.5% 80.0%
5079733 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 60.0 5.36e-01 88.7% 64.0%
3467989 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.75 61.0 5.91e-01 92.5% 91.7%
5024512 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 57.0 5.84e-01 84.9% 96.0%
4934674 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 61.0 4.44e-01 94.3% 34.7%
3886268 3919.1.1.0 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.74 62.0 5.01e-01 100.0% 61.8%
3970076 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 57.0 5.87e-01 88.7% 98.0%
5027755 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 58.0 5.17e-01 92.5% 68.8%
5074546 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 5.23e-01 96.2% 64.7%
4953832 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.72 59.0 5.85e-01 94.3% 90.9%
3196401 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 60.0 6.01e-01 100.0% 94.5%
3428283 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 59.0 5.74e-01 98.1% 95.0%
3198319 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.71 48.0 2.91e-01 100.0% 11.0%
4957413 101.1.2.244 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.71 56.0 5.76e-01 90.6% 100.0%
3807764 190.1.1.0 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box 0.71 42.0 3.76e-01 71.7% 41.3%
3261593 2007.2.3.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc 0.70 58.0 4.20e-01 98.1% 32.7%
4464648 101.1.2.244 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.70 57.0 5.33e-01 90.6% 73.8%
4397698 3919.1.1.2 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.70 59.0 4.68e-01 100.0% 84.2%
3641172 101.1.1.295 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 0.70 60.0 5.12e-01 100.0% 60.0%
5037265 102.1.1.11 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 0.70 56.0 4.55e-01 94.3% 46.4%
4944585 101.1.2.872 ↗ alpha arrays › HTH › HTH › winged helix domain › rve 0.70 56.0 5.43e-01 90.6% 83.3%
5044657 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 59.0 5.69e-01 96.2% 86.7%
3887965 101.1.1.12 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 0.69 55.0 5.49e-01 90.6% 92.7%
3878549 101.1.2.536 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 0.69 55.0 5.47e-01 90.6% 92.7%
5014942 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 5.22e-01 94.3% 100.0%
3580501 101.46.1.1 ↗ alpha arrays › HTH › Parafibromin N-terminal domain › Parafibromin N-terminal domain › CDC73_N 0.68 56.0 4.50e-01 94.3% 57.3%
4945040 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 54.0 5.29e-01 90.6% 83.3%
4258385 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.68 49.0 4.42e-01 77.4% 88.0%
4979742 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 56.0 5.00e-01 96.2% 66.3%
3899987 101.1.1.12 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 0.68 54.0 4.69e-01 90.6% 60.0%
3219897 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 52.0 5.28e-01 86.8% 92.0%
3722244 190.1.1.0 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box 0.67 50.0 3.74e-01 79.2% 49.6%
4102250 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.66 44.0 3.86e-01 71.7% 45.0%
3506153 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.66 44.0 3.79e-01 71.7% 43.4%
3287102 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 46.0 3.93e-01 98.1% 47.1%
4952396 1075.5.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE 0.64 54.0 3.60e-01 100.0% 43.9%
3255248 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.64 53.0 4.98e-01 100.0% 90.0%
3467737 7579.1.1.5 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 0.64 45.0 2.65e-01 75.5% 32.4%
3548686 109.4.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.63 52.0 3.26e-01 100.0% 30.3%
3688281 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.62 46.0 3.70e-01 77.4% 65.3%
3538509 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.61 47.0 3.73e-01 83.0% 74.3%
4576399 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.60 46.0 3.93e-01 83.0% 61.2%
5070743 103.5.1.0 ↗ alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like 0.59 40.0 4.16e-01 77.4% 86.7%
3503437 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.58 47.0 4.01e-01 88.7% 78.8%
4571343 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.54 47.0 3.78e-01 92.5% 61.7%
3597 632.3.1.2 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › Paramyx_P_V_C 0.54 47.0 4.75e-01 94.3% 96.2%
4344839 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.53 45.0 3.67e-01 92.5% 61.1%
5031047 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.52 44.0 3.10e-01 98.1% 34.3%
3605980 190.1.1.0 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box 0.51 41.0 3.58e-01 88.7% 67.5%