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MF768470.1__AUS03277.1__SL1_02__00001

Bact-Vir

MF768470.1__AUS03277.1__SL1_02__00001

Identity

Accession:
MF768470 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lindbergviridae› Pbunavirus› Pseudomonas_phage_SL1

TaxID: 2041215

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 41-136
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ay6A01 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.60 50.0 4.15e-01 91.7% 98.8%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.59 37.0 4.14e-01 81.2% 83.1%
2wqlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 48.0 4.15e-01 89.6% 82.9%
1zt4C01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.59 43.0 3.59e-01 79.2% 60.3%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.57 43.0 4.46e-01 80.2% 100.0%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 39.0 3.51e-01 96.9% 51.1%
1srqA01 3.30.1120.160 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.56 43.0 3.88e-01 84.4% 83.3%
2vneA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 44.0 3.77e-01 88.5% 78.5%
4gs5A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.53 36.0 3.56e-01 86.5% 64.8%
7ahfA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.52 37.0 3.33e-01 76.0% 89.7%
2x5gA00 3.30.720.60 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.52 39.0 3.98e-01 87.5% 84.6%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.52 36.0 3.29e-01 75.0% 66.4%
6x6aA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 36.0 2.63e-01 74.0% 39.9%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.51 38.0 3.84e-01 80.2% 97.0%
1d8hA00 3.20.100.10 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like 0.50 38.0 2.73e-01 80.2% 81.9%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4992642 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.64 30.0 3.59e-01 70.8% 66.2%
3947165 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.60 43.0 3.72e-01 74.0% 56.7%
3588775 244.3.1.5 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › GutM 0.58 41.0 3.99e-01 74.0% 80.0%
3976796 244.3.1.5 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › GutM 0.55 40.0 4.03e-01 77.1% 81.8%
4564828 4026.1.1.1 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.55 42.0 3.65e-01 83.3% 75.5%
3258675 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.55 42.0 3.72e-01 82.3% 85.7%
3303238 10.1.1.11 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.53 38.0 3.59e-01 76.0% 89.2%
3536447 4026.1.1.1 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.53 41.0 3.62e-01 84.4% 85.5%
4030063 243.4.1.0 ↗ a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like 0.52 43.0 3.38e-01 89.6% 100.0%
3256023 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.52 39.0 3.61e-01 82.3% 74.8%
3273079 9.4.1.0 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.52 44.0 4.53e-01 96.9% 100.0%
3263774 220.1.1.121 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 0.52 40.0 3.44e-01 83.3% 67.1%
5026284 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.51 39.0 3.97e-01 93.8% 83.2%
3233750 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.51 40.0 4.25e-01 85.4% 100.0%
4595353 5.1.5.75 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 0.50 41.0 2.74e-01 93.8% 83.7%
3788566 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.50 38.0 3.30e-01 80.2% 80.7%
4024322 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 36.0 3.94e-01 93.8% 96.0%
D2 medium residues 147-191_212-248
PDB
Domain cluster: representative