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MF893271.1__ATN94285.1__X__00021
Bact-VirMF893271.1__ATN94285.1__X__00021
Identity
- Accession:
- MF893271 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Taxonomy
TaxID: 2041389
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-76
Domain cluster:
rep: IMGVR_UViG_3300012973_000622-3300012973-Ga0123351_100067241__D6-74
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v4aA01 | 1.10.4050.10 | Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE | 0.81 | 47.0 | 4.12e-01 | 97.3% | 39.4% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.77 | 54.0 | 5.34e-01 | 98.6% | 68.8% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 50.0 | 4.89e-01 | 100.0% | 61.7% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.75 | 49.0 | 5.01e-01 | 100.0% | 69.0% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.74 | 53.0 | 4.91e-01 | 100.0% | 59.8% |
| 4c2mA06 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.72 | 63.0 | 4.88e-01 | 98.6% | 43.9% |
| 4ciuA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 55.0 | 3.95e-01 | 100.0% | 30.7% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.72 | 50.0 | 4.94e-01 | 95.9% | 67.9% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 41.0 | 4.51e-01 | 98.6% | 70.0% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.71 | 51.0 | 5.03e-01 | 98.6% | 70.9% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 51.0 | 5.54e-01 | 98.6% | 90.5% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 48.0 | 4.20e-01 | 100.0% | 49.5% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 44.0 | 4.59e-01 | 100.0% | 73.8% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.68 | 47.0 | 4.80e-01 | 94.6% | 72.6% |
| 2pihA00 | 1.20.1500.10 | Mainly Alpha › Up-down Bundle › YheA-like fold › YheA/YmcA-like | 0.68 | 52.0 | 4.42e-01 | 82.4% | 62.6% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 52.0 | 4.84e-01 | 98.6% | 66.7% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.66 | 34.0 | 3.82e-01 | 77.0% | 64.9% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.66 | 43.0 | 3.79e-01 | 94.6% | 46.7% |
| 1wleA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.65 | 49.0 | 4.23e-01 | 98.6% | 52.6% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.64 | 46.0 | 4.68e-01 | 91.9% | 76.4% |
| 4i0xH00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 49.0 | 4.91e-01 | 97.3% | 80.3% |
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 44.0 | 4.05e-01 | 90.5% | 55.1% |
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.64 | 56.0 | 5.04e-01 | 98.6% | 73.5% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 49.0 | 4.93e-01 | 98.6% | 82.7% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 51.0 | 4.66e-01 | 87.8% | 66.7% |
| 3cqcB01 | 1.20.58.1380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 42.0 | 4.01e-01 | 100.0% | 57.8% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 43.0 | 4.52e-01 | 83.8% | 80.6% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 44.0 | 4.26e-01 | 78.4% | 100.0% |
| 5dn6J00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.60 | 42.0 | 4.27e-01 | 98.6% | 75.7% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.60 | 37.0 | 3.98e-01 | 86.5% | 73.0% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 54.0 | 4.82e-01 | 98.6% | 72.0% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 53.0 | 4.59e-01 | 98.6% | 64.2% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 52.0 | 4.40e-01 | 95.9% | 80.5% |
| 2q9rA01 | 1.20.1590.10 | Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like | 0.58 | 48.0 | 3.58e-01 | 91.9% | 80.0% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.58 | 51.0 | 3.85e-01 | 93.2% | 43.3% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 46.0 | 4.42e-01 | 100.0% | 74.1% |
| 2l9bA00 | 1.25.40.630 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 35.0 | 3.31e-01 | 70.3% | 48.4% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 53.0 | 4.59e-01 | 100.0% | 79.1% |
| 2fcwA00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.57 | 53.0 | 4.63e-01 | 100.0% | 93.4% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.57 | 53.0 | 3.74e-01 | 100.0% | 84.2% |
| 3kzxA02 | 1.10.150.730 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.56 | 40.0 | 4.30e-01 | 77.0% | 93.5% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 42.0 | 3.91e-01 | 100.0% | 63.2% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.56 | 50.0 | 3.40e-01 | 100.0% | 45.4% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.54 | 49.0 | 3.58e-01 | 97.3% | 45.9% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 48.0 | 4.26e-01 | 97.3% | 80.6% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.54 | 45.0 | 4.21e-01 | 93.2% | 75.6% |
| 2oexA01 | 1.20.120.560 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › alix/aip1 in complex with the ypdl late domain | 0.52 | 45.0 | 3.59e-01 | 93.2% | 85.3% |
| 4gdxA02 | 1.10.246.130 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.52 | 47.0 | 4.06e-01 | 100.0% | 82.9% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 45.0 | 3.10e-01 | 98.6% | 44.7% |
| 2oyoA02 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.51 | 42.0 | 3.52e-01 | 89.2% | 79.2% |
| 2oyyA00 | 6.10.80.10 | Special › Helix non-globular › DNA polymerase; domain 1 › Hexameric tyrosine-coordinated heme protein (HTHP) | 0.50 | 42.0 | 4.26e-01 | 93.2% | 95.8% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4349607 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.81 | 55.0 | 4.72e-01 | 98.6% | 47.3% |
| 3659915 | 192.7.1.45 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Na_sulph_symp | 0.76 | 47.0 | 4.71e-01 | 100.0% | 61.3% |
| 5060491 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.75 | 54.0 | 4.55e-01 | 98.6% | 46.7% |
| 5061758 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.70 | 52.0 | 5.21e-01 | 100.0% | 77.3% |
| 3614305 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.69 | 46.0 | 2.86e-01 | 94.6% | 12.7% |
| 3416608 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.68 | 42.0 | 4.45e-01 | 90.5% | 70.8% |
| 3588113 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.67 | 49.0 | 5.21e-01 | 90.5% | 87.7% |
| 5042923 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.66 | 59.0 | 5.08e-01 | 98.6% | 98.3% |
| 4319342 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.66 | 60.0 | 4.42e-01 | 100.0% | 89.2% |
| 3278248 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.65 | 52.0 | 5.09e-01 | 98.6% | 78.8% |
| 4026843 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.65 | 53.0 | 5.50e-01 | 94.6% | 92.9% |
| 3834278 | 4133.1.1.1 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › ENT | 0.64 | 37.0 | 3.90e-01 | 100.0% | 64.6% |
| 3186805 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.62 | 44.0 | 4.56e-01 | 86.5% | 78.6% |
| 3670748 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.61 | 49.0 | 3.87e-01 | 89.2% | 44.3% |
| 3214191 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 52.0 | 4.40e-01 | 98.6% | 58.3% |
| 3201405 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.61 | 56.0 | 3.72e-01 | 100.0% | 76.4% |
| 3478372 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.60 | 55.0 | 3.84e-01 | 100.0% | 83.2% |
| 3252127 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.60 | 51.0 | 4.95e-01 | 100.0% | 83.7% |
| 3974536 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 54.0 | 3.28e-01 | 98.6% | 16.9% |
| 3971758 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.58 | 53.0 | 5.03e-01 | 97.3% | 84.7% |
| 3617518 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.58 | 37.0 | 3.81e-01 | 81.1% | 67.1% |
| 4422561 | 386.1.1.10 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › MAT1 | 0.58 | 43.0 | 4.20e-01 | 78.4% | 92.5% |
| 3249343 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.58 | 54.0 | 3.73e-01 | 100.0% | 72.9% |
| 3959687 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.57 | 52.0 | 4.66e-01 | 98.6% | 74.7% |
| 3896686 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.56 | 51.0 | 4.60e-01 | 100.0% | 89.0% |
| 4980637 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.56 | 35.0 | 3.18e-01 | 86.5% | 44.0% |
| 4864636 | 7008.1.1.1 ↗ | alpha arrays › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › Hex_IIIa | 0.54 | 44.0 | 4.04e-01 | 100.0% | 67.0% |
| 3428908 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 44.0 | 2.58e-01 | 93.2% | 11.6% |