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MF893271.1__ATN94320.1__X__00057

Bact-Vir

MF893271.1__ATN94320.1__X__00057

Identity

Accession:
MF893271 ↗
Kingdom:
phage

Quality

94.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 31-91
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.80 63.0 6.46e-01 100.0% 89.8%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.77 63.0 6.07e-01 100.0% 80.0%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.73 68.0 6.25e-01 100.0% 88.2%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.73 60.0 5.61e-01 98.4% 74.7%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 49.0 4.02e-01 88.5% 77.2%
4oelB00 2.40.50.170 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C 0.63 51.0 4.94e-01 95.1% 79.7%
3kf8A00 2.40.50.1040 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 49.0 3.49e-01 91.8% 48.8%
2fivA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.61 44.0 3.62e-01 77.0% 66.4%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.61 48.0 3.81e-01 88.5% 67.2%
4ckbD03 2.40.50.830 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 48.0 3.87e-01 93.4% 76.9%
2vbuA01 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.60 44.0 3.52e-01 80.3% 74.6%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 47.0 4.00e-01 88.5% 84.9%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 48.0 4.17e-01 93.4% 77.7%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 46.0 3.86e-01 88.5% 77.6%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 47.0 4.15e-01 91.8% 84.4%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 43.0 4.25e-01 88.5% 73.5%
7prrB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.59 42.0 3.15e-01 78.7% 99.4%
3of6E00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 44.0 3.76e-01 83.6% 94.2%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 4.32e-01 98.4% 78.3%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 51.0 4.32e-01 100.0% 83.7%
2i4kA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 45.0 3.63e-01 88.5% 83.6%
4c89C00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 43.0 2.75e-01 83.6% 73.7%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 44.0 3.86e-01 85.2% 60.6%
1fguB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 43.0 3.78e-01 90.2% 88.6%
5kkuD00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.56 45.0 2.93e-01 88.5% 64.4%
2fkbC00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 42.0 3.09e-01 82.0% 68.9%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.54 40.0 3.01e-01 82.0% 35.3%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 44.0 3.70e-01 95.1% 89.6%
1h7zA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.53 37.0 2.63e-01 72.1% 27.2%
5ywwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 42.0 3.09e-01 91.8% 87.2%
3ejvA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 3.01e-01 83.6% 84.3%
3nrfA00 2.60.40.4110 Mainly Beta › Sandwich › Immunoglobulin-like › Protein of unknown function DUF4354 0.53 41.0 3.49e-01 85.2% 91.2%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 3.40e-01 83.6% 73.8%
2rgqB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 42.0 3.32e-01 90.2% 80.5%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 3.74e-01 83.6% 69.7%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 39.0 3.05e-01 85.2% 80.0%
4u13A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.45e-01 90.2% 85.3%
1wqsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 43.0 3.71e-01 100.0% 64.1%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.51 41.0 3.24e-01 96.7% 47.0%
1q42A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 39.0 3.04e-01 90.2% 83.6%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.50 39.0 3.61e-01 90.2% 72.4%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1112010 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.73 60.0 5.61e-01 98.4% 74.7%
3177469 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 58.0 5.64e-01 100.0% 85.7%
5005890 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.68 53.0 3.75e-01 83.6% 78.3%
3509864 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.66 51.0 4.16e-01 88.5% 76.8%
3257603 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.66 52.0 4.20e-01 88.5% 73.3%
3429751 708.1.1.2 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY 0.65 48.0 4.87e-01 80.3% 80.0%
3744517 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.63 50.0 4.09e-01 88.5% 77.5%
3554073 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.63 49.0 3.95e-01 88.5% 69.2%
4003463 220.1.1.168 beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.63 51.0 4.15e-01 93.4% 64.8%
3892200 71.2.1.4 beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.62 48.0 3.25e-01 85.2% 91.9%
3616990 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 48.0 3.99e-01 85.2% 77.3%
3559952 71.2.1.4 beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.62 48.0 3.24e-01 85.2% 92.5%
3836977 708.1.2.3 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Yippee-Mis18 0.61 48.0 3.99e-01 86.9% 70.0%
4586503 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.61 47.0 3.76e-01 86.9% 83.0%
3876143 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.61 46.0 3.71e-01 86.9% 70.4%
3605539 708.1.2.3 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Yippee-Mis18 0.61 47.0 4.08e-01 86.9% 77.0%
3513396 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.60 47.0 3.46e-01 88.5% 62.8%
3747453 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.60 47.0 3.68e-01 88.5% 64.3%
3587268 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 48.0 3.89e-01 88.5% 45.0%
3903091 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.60 46.0 2.89e-01 88.5% 25.4%
3841771 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.60 46.0 3.57e-01 88.5% 66.0%
3564807 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.60 46.0 3.54e-01 88.5% 63.9%
3516379 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 45.0 3.83e-01 86.9% 76.4%
2794152 2.2.1.0 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins 0.59 48.0 3.92e-01 95.1% 83.9%
5008070 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 47.0 3.85e-01 93.4% 76.0%
3449744 4.25.1.0 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.59 47.0 4.25e-01 93.4% 95.6%
3652009 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 3.95e-01 98.4% 67.7%
3166240 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 43.0 4.33e-01 88.5% 83.3%
3894481 277.1.1.5 a+b two layers › PX domain › PX domain › PX domain › Vps5 0.58 43.0 2.76e-01 85.2% 29.7%
3972141 881.1.1.25 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF4946 0.58 43.0 3.31e-01 83.6% 38.7%
5054824 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.57 46.0 3.85e-01 93.4% 73.9%
3961460 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 45.0 3.53e-01 91.8% 70.7%
1930750 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.57 44.0 3.37e-01 86.9% 65.8%
2514980 71.1.1.1 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin 0.57 44.0 3.17e-01 85.2% 70.9%
4012805 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.57 43.0 3.52e-01 86.9% 73.8%
3623452 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.57 45.0 3.43e-01 93.4% 66.5%
3365937 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.56 43.0 4.41e-01 83.6% 85.0%
3964909 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.56 43.0 3.42e-01 90.2% 80.7%
3645656 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.56 41.0 3.79e-01 78.7% 95.0%
4660347 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.56 43.0 2.84e-01 88.5% 74.8%
4954092 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.56 43.0 3.82e-01 93.4% 83.8%
3587574 11.1.1.372 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › WxLIP_HBD 0.56 44.0 3.27e-01 88.5% 67.1%
1954221 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.56 43.0 4.13e-01 90.2% 98.7%
4033933 9.9.1.1 beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 0.56 40.0 3.31e-01 77.0% 46.1%
5054019 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 40.0 3.90e-01 80.3% 82.9%
4024970 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 41.0 2.47e-01 80.3% 16.3%
150440 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.54 40.0 3.04e-01 82.0% 36.4%
4936151 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.54 40.0 3.07e-01 82.0% 38.7%
3602793 7512.1.1.24 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5 0.53 40.0 2.88e-01 88.5% 37.0%
3204312 5.1.4.32 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.53 42.0 2.59e-01 91.8% 17.1%
1887056 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.52 39.0 3.21e-01 82.0% 73.3%
3429608 109.4.1.1256 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.52 41.0 2.32e-01 90.2% 6.9%
4987012 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.52 40.0 3.16e-01 90.2% 92.7%
3216464 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.51 40.0 3.31e-01 90.2% 83.9%
3400775 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 36.0 2.99e-01 77.0% 82.4%
3281948 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.51 38.0 3.16e-01 83.6% 88.3%
5035305 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 39.0 3.69e-01 90.2% 70.0%
4172504 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.51 41.0 2.68e-01 93.4% 40.3%
5034702 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.51 40.0 3.19e-01 95.1% 87.2%
5064728 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 37.0 3.18e-01 83.6% 90.9%
4941591 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.50 39.0 3.15e-01 93.4% 89.7%
3780836 5.1.4.257 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP, FG-GAP_3 0.50 41.0 2.63e-01 100.0% 74.1%
3344044 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.50 37.0 3.42e-01 86.9% 71.1%