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MF893340.1__ATN92851.1__PPSC2_88__00088
Bact-VirMF893340.1__ATN92851.1__PPSC2_88__00088
Identity
- Accession:
- MF893340 ↗
- Kingdom:
- phage
Quality
70.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Vandenendeviridae›
Shenlongvirus›
Pseudomonas_phage_PPSC2
TaxID: 2041350
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-50_134-149
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.61 | 42.0 | 3.76e-01 | 72.7% | 79.8% |
| 4nv1E01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.59 | 43.0 | 3.05e-01 | 75.8% | 29.6% |
| 1qr0A01 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.59 | 43.0 | 3.57e-01 | 80.3% | 64.8% |
| 4o8uA00 | 3.30.420.440 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF4152 | 0.56 | 45.0 | 3.12e-01 | 89.4% | 72.7% |
| 3jvdB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 38.0 | 3.20e-01 | 75.8% | 81.1% |
| 3khyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 40.0 | 2.94e-01 | 83.3% | 63.0% |
| 1texA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 2.83e-01 | 89.4% | 36.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977858 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 48.0 | 4.12e-01 | 92.4% | 76.2% |
| 5047341 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 45.0 | 3.91e-01 | 92.4% | 79.0% |
| 4982553 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.54 | 47.0 | 4.00e-01 | 95.5% | 77.1% |
| 3600152 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 44.0 | 4.40e-01 | 89.4% | 90.0% |
| 3498725 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.53 | 38.0 | 2.31e-01 | 77.3% | 75.9% |
| 4968340 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 43.0 | 3.88e-01 | 92.4% | 91.1% |
| 9579 | 2004.1.1.166 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulphotransf | 0.51 | 41.0 | 2.83e-01 | 89.4% | 36.4% |
| None | — | 0.50 | 40.0 | 2.80e-01 | 100.0% | 30.8% |
D2
medium
residues 51-133