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MF959999.1__ATN93319.1__X__00001
Bact-VirMF959999.1__ATN93319.1__X__00001
Identity
- Accession:
- MF959999 ↗
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-125
Domain cluster:
rep: MF959999.1__ATN93369.1__X__00051__D53-139
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24720.2 best | DUF7673 | 43.4 | 3.80e-11 | 93.2% | 97.7% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ceiA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.69 | 42.0 | 4.82e-01 | 72.7% | 84.1% |
| 3pivA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 50.0 | 4.21e-01 | 95.5% | 81.4% |
| 3qxlA00 | 1.10.840.10 | Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain | 0.59 | 45.0 | 3.30e-01 | 100.0% | 29.8% |
| 6jlzA01 | 1.20.120.1070 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain | 0.58 | 41.0 | 3.88e-01 | 73.9% | 87.0% |
| 6kjoA01 | 1.20.920.60 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.57 | 40.0 | 3.63e-01 | 73.9% | 94.4% |
| 2xzeB00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 45.0 | 3.93e-01 | 100.0% | 55.8% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 31.0 | 3.32e-01 | 75.0% | 61.3% |
| 6gs4A00 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.56 | 49.0 | 3.11e-01 | 100.0% | 87.0% |
| 7r2xA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.55 | 44.0 | 2.99e-01 | 100.0% | 22.4% |
| 2uubR00 | 4.10.640.10 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S18 › Ribosomal protein S18 | 0.55 | 34.0 | 3.68e-01 | 97.7% | 75.3% |
| 4ks9A01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.54 | 46.0 | 4.06e-01 | 100.0% | 65.1% |
| 2es9A00 | 1.20.1290.30 | Mainly Alpha › Up-down Bundle › AhpD-like › | 0.54 | 44.0 | 4.31e-01 | 100.0% | 82.0% |
| 3dp7A02 | 1.20.58.1390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 46.0 | 4.60e-01 | 97.7% | 98.9% |
| 3nzpB03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 36.0 | 3.81e-01 | 97.7% | 81.0% |
| 1beoA00 | 1.10.239.10 | Mainly Alpha › Orthogonal Bundle › Beta-cryptogein › Elicitin domain | 0.51 | 38.0 | 3.76e-01 | 87.5% | 73.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3318455 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.58 | 41.0 | 3.57e-01 | 73.9% | 61.4% |
| 3573701 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.57 | 42.0 | 3.73e-01 | 79.5% | 63.7% |
| 3804601 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.57 | 40.0 | 3.81e-01 | 75.0% | 77.3% |
| 4965723 | 182.1.3.3 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg | 0.57 | 39.0 | 3.63e-01 | 72.7% | 90.8% |
| 3422854 | 3324.1.1.2 ↗ | extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases | 0.56 | 39.0 | 3.47e-01 | 73.9% | 50.8% |
| 3561044 | 176.1.1.2 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin_2 | 0.55 | 40.0 | 4.06e-01 | 100.0% | 76.7% |
| 4623943 | 3755.3.1.288 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › LMBR1 | 0.53 | 36.0 | 3.05e-01 | 80.7% | 38.1% |
| 3657174 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.53 | 40.0 | 3.31e-01 | 80.7% | 86.7% |
| 3660016 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.53 | 35.0 | 3.16e-01 | 98.9% | 48.3% |
| 3259191 | 4995.1.1.0 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like | 0.52 | 40.0 | 3.40e-01 | 100.0% | 49.3% |
| 3309101 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.51 | 37.0 | 3.68e-01 | 98.9% | 76.7% |
| 3369871 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.50 | 37.0 | 3.09e-01 | 100.0% | 41.8% |
| 4336939 | 109.4.1.472 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RAI16-like | 0.50 | 44.0 | 3.03e-01 | 100.0% | 31.2% |