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MF959999.1__ATN93331.1__X__00013

Bact-Vir

MF959999.1__ATN93331.1__X__00013

Identity

Accession:
MF959999 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Marinobacter_phage_PS3

TaxID: 2041341

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-123
PDB
Domain cluster: representative
CATH (88)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cmrA00 1.20.58.1860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.93 68.0 5.32e-01 81.2% 39.6%
3vkgA12 1.10.287.2610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.91 84.0 6.31e-01 100.0% 45.1%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.91 57.0 7.13e-01 74.3% 100.0%
6grjB01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.91 86.0 5.84e-01 100.0% 45.2%
3u0cA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.91 86.0 7.35e-01 100.0% 71.5%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.91 81.0 8.41e-01 96.0% 100.0%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 70.0 7.01e-01 84.2% 79.4%
2gl2B00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.90 71.0 6.95e-01 100.0% 76.1%
6vq6H01 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.90 85.0 6.56e-01 100.0% 75.0%
3tulB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.90 78.0 7.01e-01 95.0% 69.2%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.90 85.0 6.25e-01 100.0% 45.3%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.90 85.0 7.07e-01 100.0% 62.7%
1fewA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.89 85.0 6.88e-01 100.0% 63.6%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.89 63.0 7.32e-01 87.1% 100.0%
2zdiC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.89 84.0 7.26e-01 100.0% 92.6%
6gy8A01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.89 85.0 5.65e-01 100.0% 32.2%
8fbnB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.89 66.0 4.90e-01 89.1% 34.7%
4cgkA01 6.10.250.3150 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.89 84.0 6.36e-01 100.0% 58.9%
3ajwA00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.88 84.0 7.50e-01 100.0% 79.9%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.88 64.0 6.93e-01 93.1% 88.4%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.88 71.0 7.03e-01 85.1% 80.2%
6h2dS01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.87 82.0 6.16e-01 100.0% 47.1%
3aonA00 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.87 82.0 6.49e-01 100.0% 81.9%
3ofnY00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.87 69.0 6.59e-01 83.2% 98.3%
1y1uA01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.86 81.0 6.32e-01 99.0% 56.4%
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.86 69.0 6.94e-01 93.1% 82.4%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.86 62.0 6.58e-01 100.0% 83.3%
5y06A01 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.85 80.0 5.99e-01 100.0% 45.0%
2v0oB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.85 73.0 5.20e-01 95.0% 33.6%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.85 70.0 7.52e-01 90.1% 100.0%
7aalA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.85 80.0 5.68e-01 99.0% 40.6%
4wjg400 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.85 74.0 5.33e-01 92.1% 60.5%
1quuA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 66.0 6.08e-01 95.0% 65.1%
2gd5A00 6.10.140.1230 Special › Helix non-globular › Helix Hairpins › 0.85 70.0 6.22e-01 96.0% 62.7%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.84 79.0 6.65e-01 100.0% 88.1%
1ek9A00 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.84 75.0 4.80e-01 94.1% 40.2%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.84 66.0 6.34e-01 81.2% 78.6%
2rd0B00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.84 78.0 6.97e-01 100.0% 74.1%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.84 65.0 7.17e-01 81.2% 100.0%
6xj1A01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.84 75.0 5.50e-01 96.0% 39.2%
6q45G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.84 79.0 6.84e-01 100.0% 72.6%
1bf5A01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.84 72.0 5.97e-01 93.1% 54.8%
6v9zA02 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.83 68.0 4.60e-01 85.1% 28.9%
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.83 76.0 5.69e-01 99.0% 50.6%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.83 75.0 5.18e-01 100.0% 31.7%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.83 61.0 6.88e-01 98.0% 100.0%
6tqfA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.83 71.0 4.67e-01 92.1% 25.3%
6iknD01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.82 75.0 5.37e-01 99.0% 36.7%
4jioA01 1.20.120.560 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › alix/aip1 in complex with the ypdl late domain 0.82 69.0 5.76e-01 88.1% 65.8%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.82 57.0 5.59e-01 74.3% 67.3%
2ficB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.82 73.0 5.68e-01 99.0% 47.8%
3cazB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.81 72.0 5.60e-01 96.0% 47.1%
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.81 71.0 6.81e-01 95.0% 82.5%
1rfyB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.80 57.0 6.16e-01 81.2% 84.1%
4mrsA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.80 70.0 4.72e-01 97.0% 27.5%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.79 61.0 6.13e-01 92.1% 80.6%
6vq6G02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.79 68.0 5.53e-01 93.1% 98.4%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 73.0 7.19e-01 100.0% 92.5%
2dq0A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.79 63.0 6.23e-01 92.1% 81.3%
2fb5A01 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.78 54.0 6.25e-01 75.2% 100.0%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.78 54.0 6.04e-01 76.2% 91.0%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.78 58.0 5.68e-01 83.2% 70.9%
4wpeA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.78 68.0 4.88e-01 93.1% 41.8%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 59.0 5.77e-01 99.0% 73.8%
1i4dA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.78 66.0 5.30e-01 100.0% 48.9%
1uruA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.78 71.0 5.54e-01 100.0% 49.3%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.78 55.0 5.61e-01 83.2% 75.5%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.76 47.0 5.66e-01 91.1% 98.4%
3k29A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 68.0 5.84e-01 100.0% 64.0%
2v0xA01 1.10.287.3160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.75 67.0 5.68e-01 99.0% 60.1%
3vkhA11 1.20.920.20 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.75 67.0 4.67e-01 98.0% 99.7%
3pwxA01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.75 67.0 5.51e-01 100.0% 97.3%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 66.0 6.46e-01 98.0% 94.5%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.74 55.0 6.08e-01 79.2% 100.0%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.73 52.0 5.88e-01 76.2% 100.0%
3g67A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.71 63.0 5.01e-01 100.0% 47.9%
2xokP00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.71 49.0 5.52e-01 70.3% 100.0%
3i2wA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.71 62.0 4.61e-01 96.0% 39.5%
3g9gA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.71 66.0 4.81e-01 100.0% 40.4%
2y44A00 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.70 61.0 4.99e-01 96.0% 52.7%
1l8dA00 1.10.287.510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.70 63.0 6.27e-01 100.0% 99.0%
2qe7G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.70 59.0 6.03e-01 98.0% 97.9%
4ke2A00 6.10.140.1860 Special › Helix non-globular › Helix Hairpins › 0.69 56.0 4.52e-01 87.1% 45.9%
2wgmA01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.68 52.0 5.65e-01 94.1% 100.0%
2d1lA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 60.0 4.55e-01 100.0% 41.0%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.66 57.0 5.78e-01 97.0% 100.0%
3a7mA01 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.63 42.0 4.09e-01 81.2% 61.8%
1cnt200 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.55 48.0 4.38e-01 92.1% 72.3%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4445903 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.94 91.0 6.35e-01 100.0% 38.5%
4982498 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.94 90.0 5.35e-01 100.0% 32.7%
4260979 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.94 81.0 5.75e-01 100.0% 34.3%
3771046 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.94 88.0 5.22e-01 100.0% 16.0%
3495507 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.94 90.0 7.38e-01 100.0% 69.7%
3470680 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.93 89.0 5.67e-01 100.0% 89.9%
4001186 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.93 89.0 6.97e-01 100.0% 64.7%
3559082 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.93 89.0 7.09e-01 100.0% 56.7%
3336964 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.93 89.0 6.33e-01 100.0% 51.0%
3169716 2004.1.1.567 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23 0.93 88.0 4.93e-01 100.0% 51.6%
3916825 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.93 88.0 7.54e-01 100.0% 70.0%
3634628 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.92 88.0 5.61e-01 100.0% 82.4%
4977416 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.92 88.0 6.41e-01 100.0% 45.2%
4297121 3755.3.1.46 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › She9_MDM33 0.92 88.0 6.57e-01 100.0% 53.2%
3609437 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.92 85.0 7.60e-01 100.0% 72.6%
4992667 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.92 87.0 6.12e-01 100.0% 39.6%
3727084 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.92 87.0 6.05e-01 100.0% 81.8%
3470823 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.92 87.0 5.86e-01 100.0% 33.5%
3923871 192.2.1.48 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › PF26022 0.92 86.0 7.05e-01 99.0% 67.1%
4014427 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.91 87.0 5.94e-01 100.0% 34.4%
5040840 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.91 87.0 5.05e-01 100.0% 15.1%
3592972 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.91 88.0 6.79e-01 100.0% 85.1%
3273065 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.91 87.0 5.64e-01 100.0% 28.7%
3642640 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.91 86.0 5.88e-01 100.0% 37.7%
3706526 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.91 86.0 7.35e-01 100.0% 72.7%
5002671 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.90 86.0 7.17e-01 100.0% 66.3%
4955963 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.90 85.0 6.59e-01 100.0% 63.0%
3889547 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.90 85.0 6.70e-01 100.0% 58.9%
3523901 148.1.3.321 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26346 0.90 83.0 6.82e-01 96.0% 66.7%
4324117 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.90 85.0 5.64e-01 100.0% 57.1%
3611166 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.90 85.0 6.56e-01 100.0% 60.0%
3764842 209.1.1.1 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.89 85.0 5.78e-01 99.0% 35.7%
4244210 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.89 85.0 6.73e-01 100.0% 93.0%
3865253 209.1.1.1 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.89 84.0 5.66e-01 99.0% 33.7%
3190705 2004.1.1.433 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.89 84.0 5.04e-01 100.0% 44.5%
5054541 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.89 85.0 5.09e-01 100.0% 44.8%
3699468 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.89 84.0 6.51e-01 100.0% 53.5%
3598431 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.89 84.0 6.90e-01 99.0% 66.1%
3716214 3755.3.1.6 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Flagellar_rod 0.88 83.0 6.77e-01 100.0% 61.1%
4144790 3755.3.1.592 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PF30340 0.88 83.0 5.36e-01 100.0% 52.5%
5066104 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.88 84.0 5.07e-01 100.0% 43.7%
3867942 3755.3.1.303 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th 0.88 83.0 6.13e-01 100.0% 43.0%
3183024 3755.3.1.46 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › She9_MDM33 0.88 81.0 7.11e-01 97.0% 70.7%
5062807 1203.1.2.0 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.88 83.0 5.21e-01 100.0% 39.8%
3562523 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.88 79.0 6.53e-01 96.0% 69.4%
4604091 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.88 80.0 8.05e-01 96.0% 97.0%
3694749 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.87 82.0 5.94e-01 100.0% 39.6%
3919840 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.87 83.0 6.25e-01 100.0% 63.2%
3686252 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.87 82.0 6.39e-01 100.0% 62.0%
3623410 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.87 81.0 4.98e-01 100.0% 32.1%
5073485 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.87 81.0 6.84e-01 100.0% 66.3%
4969098 3926.1.1.0 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D 0.87 81.0 6.62e-01 100.0% 78.3%
3732397 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.86 80.0 7.51e-01 99.0% 89.2%
3704098 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.86 81.0 6.66e-01 100.0% 63.5%
3484619 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.86 82.0 5.58e-01 100.0% 35.5%
3601913 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.86 81.0 5.17e-01 100.0% 26.7%
5062668 3755.1.1.0 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.86 81.0 7.48e-01 100.0% 84.8%
3875862 192.7.1.83 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › KIF9 0.86 81.0 7.44e-01 100.0% 86.4%
3739779 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.86 81.0 6.43e-01 100.0% 70.3%
3366371 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.86 80.0 5.70e-01 100.0% 53.0%
3880841 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.85 80.0 6.46e-01 100.0% 63.9%
3409871 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.85 80.0 4.87e-01 99.0% 20.2%
4260209 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.85 79.0 4.86e-01 100.0% 53.9%
3520288 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.84 78.0 5.88e-01 100.0% 44.3%
1879027 244.1.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.84 78.0 5.13e-01 99.0% 26.5%
4028874 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.84 75.0 5.17e-01 100.0% 31.1%
3600677 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.84 74.0 5.92e-01 93.1% 62.7%
3780286 244.1.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.84 79.0 4.80e-01 100.0% 24.6%
3578653 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.83 77.0 6.26e-01 100.0% 56.7%
3890086 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.83 77.0 6.45e-01 100.0% 66.7%
4541080 3755.1.1.11 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › She9_MDM33 0.83 76.0 6.73e-01 98.0% 73.6%
4011567 3939.1.1.0 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.82 76.0 5.12e-01 100.0% 28.5%
3930058 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.82 77.0 6.62e-01 100.0% 68.0%
3739544 2004.1.1.433 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.82 75.0 4.42e-01 96.0% 21.9%
3418796 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.82 76.0 5.95e-01 99.0% 51.3%
5073876 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.82 75.0 4.75e-01 100.0% 21.5%
5057329 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.82 75.0 6.62e-01 100.0% 71.7%
3517916 2004.1.1.480 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 0.81 77.0 4.90e-01 100.0% 29.3%
3829282 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.81 75.0 6.76e-01 100.0% 91.9%
3289782 5067.1.1.4 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL 0.81 74.0 4.44e-01 100.0% 17.3%
3610088 5086.1.1.105 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Flagellar_rod 0.80 72.0 5.91e-01 98.0% 81.1%
4219808 192.1.1.0 ↗ alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.80 73.0 4.93e-01 100.0% 47.3%
3942242 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.79 73.0 6.47e-01 99.0% 80.0%
3169797 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.78 72.0 4.60e-01 100.0% 22.4%
3741747 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.77 70.0 5.02e-01 100.0% 76.1%
5050733 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.77 72.0 7.11e-01 100.0% 98.1%
4038138 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.77 71.0 6.47e-01 100.0% 90.8%
3386594 3291.1.1.197 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › MCPsignal 0.75 66.0 6.60e-01 99.0% 100.0%
5048802 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.74 68.0 5.54e-01 100.0% 56.7%
3715005 604.8.1.0 ↗ alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo 0.73 65.0 5.62e-01 100.0% 85.6%
3565133 3755.3.1.44 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › JMY 0.71 61.0 5.73e-01 92.1% 78.3%
4392833 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.69 62.0 4.84e-01 100.0% 53.5%
D2 medium residues 1-22_126-199
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kl9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 41.0 4.63e-01 75.0% 80.0%
1d7qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 49.0 4.24e-01 77.1% 53.8%
1b7yB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 48.0 4.55e-01 77.1% 89.7%
7k98B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 47.0 4.47e-01 77.1% 93.9%
5ygbA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 43.0 3.86e-01 70.8% 83.5%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 30.0 3.38e-01 70.8% 56.6%
4qmgC01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 43.0 3.63e-01 75.0% 58.5%
1quqB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 52.0 4.89e-01 100.0% 79.8%
2pi2D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 50.0 4.60e-01 96.9% 73.2%
3kf6A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 49.0 4.42e-01 94.8% 74.3%
2k5wA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.57 42.0 4.00e-01 77.1% 81.1%
3go5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 40.0 4.39e-01 74.0% 92.4%
3mc0B02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 39.0 4.17e-01 74.0% 97.6%
1eujA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 48.0 4.05e-01 100.0% 72.0%
6ipaA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 46.0 3.95e-01 99.0% 64.2%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4239444 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.80 48.0 6.02e-01 70.8% 96.7%
4946866 2.1.1.216 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › AAA 0.79 48.0 4.87e-01 70.8% 62.1%
4889436 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.79 47.0 5.82e-01 70.8% 93.5%
3511510 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.79 48.0 4.40e-01 70.8% 49.2%
4011957 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 48.0 4.46e-01 70.8% 51.3%
3723120 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.78 48.0 4.17e-01 70.8% 43.7%
3374891 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.78 47.0 4.44e-01 70.8% 51.3%
4165766 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.78 47.0 5.84e-01 70.8% 96.7%
4053768 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.78 48.0 4.48e-01 71.9% 52.2%
1881367 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.78 46.0 5.72e-01 70.8% 93.5%
2999153 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.77 48.0 5.36e-01 71.9% 78.9%
4916419 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.76 47.0 4.73e-01 71.9% 62.5%
4453931 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.75 46.0 5.71e-01 70.8% 98.3%
3936225 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 32.0 3.77e-01 70.8% 55.7%
4369338 2.1.1.21 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Methyltrn_RNA_3 0.72 45.0 5.13e-01 70.8% 85.7%
4615329 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 52.0 4.97e-01 77.1% 96.4%
3581631 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 32.0 3.86e-01 74.0% 64.6%
3999846 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 33.0 3.71e-01 74.0% 60.0%
3186247 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.67 50.0 4.46e-01 77.1% 60.0%
136897 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.66 46.0 4.75e-01 71.9% 83.7%
319 2.1.1.16 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.66 48.0 4.59e-01 77.1% 92.0%
3407819 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 48.0 4.81e-01 78.1% 90.0%
5045419 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 39.0 4.55e-01 74.0% 87.7%
5000620 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.64 49.0 4.67e-01 80.2% 71.8%
4371107 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.63 47.0 4.62e-01 78.1% 73.3%
3547082 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.62 44.0 4.22e-01 74.0% 74.5%
3225974 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 43.0 4.50e-01 72.9% 91.1%
3925804 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.61 43.0 3.62e-01 72.9% 63.7%
3504269 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.61 43.0 4.16e-01 74.0% 76.4%
3468143 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 42.0 3.60e-01 74.0% 66.3%
3214896 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 41.0 3.94e-01 70.8% 63.6%
378400 2.1.1.43 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 0.58 51.0 4.77e-01 100.0% 78.8%
3576940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 34.0 2.56e-01 80.2% 25.3%
4297175 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.55 36.0 3.70e-01 99.0% 71.1%
4512935 2.4.1.3 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.53 45.0 4.12e-01 97.9% 69.5%
D3 medium residues 200-283
PDB
Domain cluster: rep: IMGVR_UViG_3300001866_000001-3300001866-JGI24729J20445_1000037137__D2-93
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rcnA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.82 57.0 6.64e-01 91.7% 98.4%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 54.0 6.37e-01 89.3% 100.0%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 58.0 6.48e-01 90.5% 100.0%
2awnC02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.74 53.0 5.55e-01 92.9% 80.8%
1t9hA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 59.0 6.29e-01 94.0% 98.6%
3pqiA01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.72 58.0 5.95e-01 85.7% 100.0%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 41.0 4.43e-01 76.2% 65.8%
3m7nA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 60.0 6.01e-01 92.9% 100.0%
2nn6I02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 64.0 5.51e-01 100.0% 93.0%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.70 48.0 5.36e-01 79.8% 89.6%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 49.0 5.35e-01 85.7% 90.0%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 55.0 5.91e-01 88.1% 98.6%
4ifdI02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 60.0 5.04e-01 100.0% 92.4%
4pmwA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 52.0 5.11e-01 83.3% 100.0%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 55.0 5.08e-01 88.1% 74.0%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 55.0 5.24e-01 88.1% 82.1%
2qgqA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 45.0 5.28e-01 84.5% 100.0%
1bvsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 47.0 5.20e-01 88.1% 98.5%
2id0A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 45.0 4.65e-01 89.3% 76.9%
3nswA00 2.40.50.780 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 54.0 4.98e-01 92.9% 70.8%
1y14D02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 53.0 5.25e-01 86.9% 100.0%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 55.0 5.65e-01 92.9% 98.8%
3trzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 57.0 5.67e-01 97.6% 97.7%
2k52A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 52.0 5.53e-01 94.0% 98.6%
2eqsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 55.0 5.46e-01 95.2% 94.4%
1go3E01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 56.0 5.38e-01 94.0% 95.7%
2cqoA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 55.0 5.32e-01 94.0% 89.1%
3psiA06 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 52.0 4.94e-01 90.5% 76.0%
2ba0A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 55.0 5.46e-01 96.4% 95.4%
2khiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 53.0 5.12e-01 95.2% 85.3%
2id0A04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 51.0 5.05e-01 89.3% 100.0%
2je6I02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 53.0 5.22e-01 95.2% 96.6%
3c8iA00 2.40.410.10 Mainly Beta › Beta Barrel › putative membrane protein from Corynebacterium diphtheriae fold › putative membrane protein from Corynebacterium diphtheriae superfamily 0.60 49.0 4.29e-01 89.3% 76.4%
4pz7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 51.0 4.28e-01 91.7% 63.5%
1smxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 49.0 4.92e-01 89.3% 93.1%
1et9A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 44.0 4.46e-01 92.9% 80.7%
6lbrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 49.0 3.84e-01 96.4% 66.5%
3nwsA01 2.40.50.800 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 47.0 4.05e-01 95.2% 89.4%
2eqnA01 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.56 39.0 3.87e-01 71.4% 89.7%
4dkmA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.50 42.0 3.23e-01 96.4% 76.5%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4934441 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.80 57.0 6.49e-01 90.5% 96.9%
4399115 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.79 59.0 6.63e-01 90.5% 100.0%
5030269 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 61.0 5.85e-01 89.3% 75.8%
5030261 2.1.1.363 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2101 0.74 54.0 6.14e-01 84.5% 100.0%
5067766 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 66.0 5.72e-01 100.0% 93.0%
4948008 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 57.0 5.57e-01 91.7% 75.6%
5029258 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 62.0 5.85e-01 94.0% 92.0%
185474 2.1.1.96 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Gp138_N 0.71 61.0 6.08e-01 91.7% 98.9%
5012781 2.1.1.51 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 0.71 62.0 5.36e-01 97.6% 93.8%
3490327 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 61.0 5.27e-01 95.2% 83.1%
4954140 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 62.0 5.40e-01 98.8% 93.8%
5038610 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 62.0 5.21e-01 97.6% 84.3%
3567611 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 61.0 5.20e-01 95.2% 80.0%
4967975 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 63.0 5.42e-01 100.0% 92.3%
3611506 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 57.0 5.24e-01 90.5% 86.4%
4093045 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 58.0 6.01e-01 89.3% 100.0%
4982858 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 62.0 5.27e-01 98.8% 90.4%
5034004 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 62.0 5.36e-01 100.0% 92.3%
4994971 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 61.0 5.34e-01 97.6% 93.6%
3627759 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.69 60.0 3.78e-01 94.0% 22.2%
4987517 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.69 60.0 5.23e-01 97.6% 92.2%
5011984 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 60.0 5.30e-01 96.4% 95.8%
4976822 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.68 62.0 5.39e-01 100.0% 94.4%
4967267 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 61.0 5.24e-01 100.0% 89.6%
4943890 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 61.0 5.24e-01 100.0% 86.7%
4970474 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.68 61.0 5.31e-01 100.0% 90.0%
5042801 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 60.0 5.23e-01 98.8% 91.5%
5048438 2.1.1.51 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 0.68 61.0 5.22e-01 100.0% 88.1%
3606816 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 60.0 5.43e-01 95.2% 73.6%
3510519 2.1.1.236 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29292 0.68 58.0 5.72e-01 92.9% 87.8%
5036890 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 60.0 5.26e-01 98.8% 95.2%
3494172 2.1.1.51 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 0.68 60.0 4.90e-01 100.0% 88.7%
3991278 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 56.0 5.33e-01 90.5% 83.0%
5053183 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 60.0 5.28e-01 100.0% 94.4%
3506126 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 58.0 5.23e-01 95.2% 89.6%
3232865 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 60.0 5.11e-01 100.0% 89.6%
4999913 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 60.0 5.25e-01 100.0% 92.8%
3578390 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 52.0 3.96e-01 92.9% 36.3%
3685207 2.1.1.51 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 0.67 60.0 5.03e-01 100.0% 92.4%
4978231 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 60.0 5.24e-01 100.0% 93.6%
3389706 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 54.0 5.44e-01 88.1% 100.0%
4324412 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 54.0 4.86e-01 88.1% 93.9%
3243621 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 57.0 5.59e-01 92.9% 88.9%
4929508 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 59.0 5.20e-01 100.0% 92.8%
3697233 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.66 57.0 5.18e-01 94.0% 75.5%
3505078 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 58.0 5.43e-01 98.8% 98.1%
4588738 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.66 54.0 5.44e-01 88.1% 100.0%
3591257 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 48.0 5.38e-01 85.7% 100.0%
3274935 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.66 56.0 4.75e-01 94.0% 60.0%
3303516 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.65 55.0 5.28e-01 90.5% 80.0%
4453243 2.1.1.219 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_cyt-4 0.65 54.0 5.42e-01 95.2% 89.4%
143318 2.1.1.114 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › AceES-2 0.65 54.0 4.98e-01 92.9% 70.8%
5044702 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.65 58.0 5.15e-01 97.6% 80.0%
3237030 2.1.1.89 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term 0.65 57.0 5.12e-01 95.2% 89.6%
4956433 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.65 55.0 5.20e-01 91.7% 99.0%
3977606 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 54.0 5.12e-01 90.5% 77.0%
3507463 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 56.0 5.07e-01 95.2% 94.8%
4002827 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 55.0 3.31e-01 94.0% 14.0%
4957074 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 57.0 4.95e-01 98.8% 86.9%
5073855 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.64 58.0 4.99e-01 98.8% 77.7%
4945723 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 58.0 5.45e-01 98.8% 98.0%
4929903 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.64 58.0 5.34e-01 98.8% 97.1%
195783 2.23.1.1 ↗ beta barrels › OB-fold › Hypothetical protein yobA › Hypothetical protein yobA › DUF3221 0.64 54.0 4.98e-01 91.7% 88.9%
165768 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.64 55.0 5.29e-01 95.2% 86.5%
4990538 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 56.0 4.99e-01 98.8% 94.3%
3293816 2.1.1.81 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 0.63 53.0 5.17e-01 89.3% 100.0%
3740511 2.1.1.89 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term 0.62 47.0 4.62e-01 79.8% 88.9%
3442276 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 50.0 4.42e-01 85.7% 97.5%
3930537 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 52.0 5.19e-01 90.5% 89.4%
3744373 2.1.1.177 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.62 51.0 3.11e-01 90.5% 14.8%
3617001 2.1.1.246 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29071 0.61 52.0 4.65e-01 91.7% 87.0%
3261590 2.1.1.81 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 0.61 54.0 5.07e-01 95.2% 100.0%
1682596 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.61 52.0 4.55e-01 94.0% 68.5%
4622758 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 49.0 4.70e-01 86.9% 97.9%
3934825 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 53.0 4.77e-01 98.8% 99.1%
4832861 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 48.0 4.51e-01 89.3% 80.4%
4101945 2.1.1.31 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C 0.58 47.0 3.75e-01 91.7% 83.9%
3792976 2.3.1.0 ↗ beta barrels › OB-fold › TIMP-like › TIMP-like 0.58 47.0 4.30e-01 91.7% 71.3%
5077962 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.57 47.0 4.13e-01 89.3% 99.2%
3203190 264.1.1.0 ↗ beta barrels › LigT-like › LigT-related › LigT-related 0.51 39.0 3.31e-01 83.3% 56.6%
D4 medium residues 284-348_677-697_731-748_783-856
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.54 27.0 3.69e-01 89.3% 94.4%
3t4nA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.53 28.0 3.67e-01 89.3% 93.8%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 23.0 3.26e-01 80.3% 92.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5019287 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 27.0 3.70e-01 73.0% 91.8%
4981234 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.54 21.0 3.35e-01 94.4% 95.4%
5073891 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.51 27.0 3.51e-01 89.3% 90.0%
4929596 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 43.0 3.26e-01 94.4% 97.8%
D5 medium residues 349-369_399-527
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1oygA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.74 68.0 4.85e-01 100.0% 59.2%
2g8sB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 59.0 4.54e-01 100.0% 63.4%
3akhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 59.0 4.64e-01 100.0% 60.0%
3c5mA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 58.0 4.29e-01 100.0% 43.1%
6n8pA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 51.0 3.85e-01 100.0% 54.9%
5e1vB00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.51 37.0 2.96e-01 72.7% 81.4%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3448058 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.68 62.0 4.76e-01 100.0% 54.8%
5014272 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.68 33.0 4.74e-01 74.7% 100.0%
2526900 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 62.0 4.20e-01 100.0% 52.3%
None — 0.68 62.0 4.44e-01 100.0% 63.5%
3290396 5.1.2.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N 0.68 62.0 4.97e-01 100.0% 59.3%
3838341 5.1.3.26 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.67 62.0 4.71e-01 100.0% 52.4%
3939750 5.1.4.55 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ELYS-bb 0.67 61.0 4.29e-01 100.0% 47.4%
3791149 5.1.3.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 0.67 61.0 4.60e-01 100.0% 56.9%
3633634 5.1.4.80 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller 0.67 62.0 4.36e-01 100.0% 39.8%
3413325 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 61.0 4.51e-01 100.0% 43.7%
3580087 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 60.0 4.22e-01 100.0% 42.5%
3322985 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 57.0 4.06e-01 100.0% 32.6%
4030473 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 50.0 3.64e-01 98.0% 29.1%
3632913 5.1.4.249 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 0.66 61.0 4.27e-01 100.0% 55.7%
3995515 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 57.0 4.54e-01 95.3% 46.1%
5039153 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 59.0 4.38e-01 100.0% 50.4%
3062082 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.66 60.0 4.29e-01 100.0% 51.7%
5058595 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 59.0 4.53e-01 100.0% 53.9%
3734800 5.1.4.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.65 59.0 4.20e-01 100.0% 65.1%
3740970 5.1.4.249 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 0.65 60.0 4.51e-01 100.0% 49.4%
4940923 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 35.0 4.62e-01 86.7% 97.5%
3475552 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 57.0 4.47e-01 100.0% 48.7%
3573300 5.1.3.26 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.62 57.0 4.24e-01 100.0% 49.5%
5058622 5.1.9.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain in ABC toxin B component 0.61 54.0 4.52e-01 99.3% 56.4%
3583345 5.1.4.288 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N 0.61 55.0 3.98e-01 100.0% 50.0%
4012750 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.61 55.0 4.05e-01 100.0% 41.7%
5052595 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.60 55.0 3.89e-01 100.0% 50.5%
4142302 5.1.4.16 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.60 55.0 4.23e-01 100.0% 47.5%
3199793 5.1.5.179 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Clathrin-link 0.58 53.0 4.06e-01 100.0% 47.5%
3376439 5.1.4.276 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_2nd 0.58 53.0 3.90e-01 100.0% 43.6%
3185751 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.57 52.0 3.81e-01 100.0% 48.9%
3788862 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 50.0 3.76e-01 100.0% 45.2%
4993562 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.56 36.0 4.22e-01 84.0% 92.4%
3518962 5.1.4.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,CAF1C_H4-bd 0.56 51.0 3.81e-01 100.0% 50.0%
2541822 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.56 49.0 4.56e-01 99.3% 75.5%
3419997 243.3.1.19 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.55 39.0 4.44e-01 95.3% 99.1%
3723969 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 37.0 3.71e-01 76.0% 90.0%
3507416 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 35.0 3.26e-01 94.0% 55.8%
3679001 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.50 37.0 3.54e-01 82.0% 64.2%
4125649 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.50 41.0 3.86e-01 88.7% 81.6%
D6 medium residues 528-545_567-596_623-641
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 47.0 3.78e-01 70.1% 48.0%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.67 46.0 3.00e-01 73.1% 19.7%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 44.0 4.25e-01 70.1% 69.7%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.65 54.0 3.92e-01 100.0% 33.5%
3imhA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.62 42.0 2.74e-01 73.1% 99.1%
1uhzA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 41.0 3.73e-01 70.1% 58.4%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 41.0 3.91e-01 73.1% 73.1%
1di2A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 40.0 4.04e-01 73.1% 78.3%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.58 39.0 4.06e-01 71.6% 81.0%
3afcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 49.0 2.97e-01 100.0% 51.0%
3vskA01 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.57 39.0 3.16e-01 71.6% 97.7%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 40.0 3.93e-01 73.1% 77.5%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 51.0 3.08e-01 100.0% 34.8%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 39.0 3.97e-01 73.1% 79.4%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 37.0 3.42e-01 70.1% 70.3%
3ff2A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 46.0 3.78e-01 89.6% 90.6%
5kzwA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.55 43.0 3.01e-01 88.1% 25.8%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 49.0 3.35e-01 100.0% 73.6%
4u13A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 45.0 3.77e-01 88.1% 88.1%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 38.0 3.41e-01 73.1% 54.3%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 48.0 3.81e-01 100.0% 82.1%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.54 46.0 3.15e-01 98.5% 29.4%
2gx9A00 3.30.420.330 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Influenza virus non-structural protein, effector domain 0.54 37.0 3.06e-01 73.1% 59.5%
3bgaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 42.0 2.83e-01 86.6% 93.7%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 48.0 3.93e-01 100.0% 87.0%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 44.0 2.89e-01 91.0% 25.9%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.53 39.0 3.62e-01 88.1% 61.9%
7bvaA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.53 43.0 2.95e-01 88.1% 42.5%
4h3uA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 46.0 3.74e-01 100.0% 86.2%
3ec9A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 46.0 3.74e-01 100.0% 89.1%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 44.0 3.50e-01 98.5% 61.5%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 40.0 3.12e-01 86.6% 95.5%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 3.90e-01 86.6% 76.7%
2shpB03 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 43.0 2.89e-01 94.0% 28.4%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.51 47.0 3.59e-01 100.0% 77.2%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 43.0 2.82e-01 91.0% 27.0%
2w0mA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 42.0 2.98e-01 94.0% 86.8%
2jjdF02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 43.0 2.89e-01 92.5% 28.6%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 43.0 3.72e-01 95.5% 92.7%
3g0kA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 45.0 3.66e-01 100.0% 80.5%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4024735 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 46.0 4.59e-01 83.6% 65.7%
4463771 3347.1.1.0 ↗ beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 0.62 48.0 4.15e-01 100.0% 53.3%
5028870 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.60 41.0 4.08e-01 70.1% 74.3%
3928223 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 42.0 3.82e-01 73.1% 58.9%
5045854 243.5.1.0 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.60 42.0 3.96e-01 73.1% 73.8%
3789856 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.59 41.0 3.46e-01 73.1% 51.3%
3668772 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.58 51.0 3.82e-01 98.5% 42.9%
3269422 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.58 40.0 2.73e-01 73.1% 18.1%
3749345 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.57 39.0 3.66e-01 70.1% 63.7%
4040354 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 40.0 3.87e-01 73.1% 72.0%
3954450 5.1.2.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF4185 0.56 50.0 3.12e-01 100.0% 34.8%
3539169 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.56 46.0 3.36e-01 91.0% 81.6%
3237402 5084.4.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › DUF7042 0.56 47.0 3.64e-01 92.5% 70.3%
3326109 5.3.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.55 43.0 3.62e-01 97.0% 46.9%
5035305 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 38.0 3.63e-01 73.1% 61.3%
3494351 9.1.1.50 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7042 0.55 46.0 3.64e-01 92.5% 62.0%
1349151 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.55 45.0 3.77e-01 88.1% 88.1%
3399366 9.14.1.3 ↗ beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › DUF7042 0.54 46.0 3.60e-01 92.5% 60.0%
3581140 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.54 44.0 2.90e-01 89.6% 28.1%
3240153 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.54 47.0 3.83e-01 97.0% 72.8%
5019857 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.54 47.0 3.36e-01 98.5% 82.0%
4940923 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 49.0 4.60e-01 100.0% 86.3%
4965849 3435.1.1.9 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › DUF4747 0.54 43.0 2.95e-01 100.0% 23.5%
3812766 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.54 41.0 4.07e-01 85.1% 77.1%
3257844 71.1.1.16 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.54 48.0 3.41e-01 98.5% 80.5%
3189324 375.1.1.319 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Saf4_Yju2 0.54 37.0 3.66e-01 73.1% 68.6%
3493131 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 41.0 3.67e-01 85.1% 60.0%
3716442 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 45.0 2.83e-01 98.5% 48.5%
5083728 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.53 43.0 3.77e-01 88.1% 99.0%
3625276 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.53 43.0 2.84e-01 89.6% 27.2%
3399368 9.14.1.3 ↗ beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › DUF7042 0.53 44.0 3.51e-01 92.5% 85.2%
5079778 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 45.0 2.78e-01 100.0% 24.2%
4975739 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 44.0 2.82e-01 98.5% 28.2%
3273079 9.4.1.0 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.52 44.0 3.99e-01 92.5% 91.0%
3953440 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.52 47.0 3.15e-01 100.0% 27.8%
2798302 517.2.1.1 ↗ beta barrels › CBF-like › TraF › TraF › TrbI 0.52 38.0 3.23e-01 86.6% 46.2%
3509731 71.1.1.19 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.51 44.0 3.12e-01 100.0% 92.3%
3967111 3338.2.1.2 ↗ a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › BamI_lipocalin 0.51 42.0 3.42e-01 97.0% 48.8%
3217184 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.50 43.0 3.50e-01 97.0% 90.0%
3929846 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 42.0 2.73e-01 92.5% 27.6%
3984944 213.2.1.0 ↗ a+b three layers › Nat/Ivy › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme, Ivy 0.50 40.0 3.76e-01 100.0% 70.6%
3265961 71.1.1.16 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.50 43.0 3.15e-01 97.0% 82.1%
D7 medium residues 546-566_597-622_642-676_698-730_749-782
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.73 60.0 4.23e-01 84.6% 40.4%
2hdiA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.71 57.0 3.94e-01 83.9% 43.6%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.70 57.0 3.83e-01 84.6% 47.8%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.68 61.0 3.96e-01 95.3% 75.0%
7btxA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.66 53.0 4.03e-01 83.9% 66.5%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.66 54.0 4.03e-01 85.2% 52.1%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.65 55.0 4.88e-01 89.9% 96.2%
5dl8A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.65 53.0 3.86e-01 85.9% 39.6%
2ynkA00 2.40.160.130 Mainly Beta › Beta Barrel › Porin › Capsule assembly protein Wzi 0.64 52.0 3.71e-01 85.9% 93.9%
4bumX00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.63 44.0 3.51e-01 84.6% 37.1%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.63 59.0 4.13e-01 99.3% 92.7%
2zxkA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.61 52.0 4.27e-01 91.3% 86.5%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.60 53.0 4.34e-01 94.6% 95.2%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.59 53.0 3.94e-01 97.3% 85.2%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.58 54.0 4.17e-01 100.0% 97.5%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.57 43.0 4.13e-01 81.2% 67.1%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.57 50.0 3.80e-01 94.0% 89.7%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.56 43.0 4.27e-01 79.2% 96.1%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.56 52.0 4.10e-01 100.0% 88.8%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.55 41.0 4.33e-01 75.2% 86.3%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.54 41.0 4.21e-01 81.2% 95.2%
3rwxA02 2.40.128.350 Mainly Beta › Beta Barrel › Lipocalin › 0.53 37.0 3.96e-01 72.5% 100.0%
8bddA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 45.0 3.38e-01 91.3% 96.7%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 45.0 4.44e-01 93.3% 99.4%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.52 44.0 4.46e-01 89.9% 97.3%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.51 44.0 3.96e-01 91.9% 99.5%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 44.0 4.12e-01 94.6% 84.7%
4ok4A02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 44.0 3.40e-01 96.6% 95.3%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 39.0 3.96e-01 81.9% 80.9%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3236032 5084.5.3.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.72 58.0 3.80e-01 83.2% 46.8%
3839826 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.66 51.0 3.74e-01 79.9% 50.9%
3804993 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.63 48.0 3.66e-01 77.9% 39.5%
3490071 71.2.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.59 52.0 4.47e-01 94.6% 93.2%
3983528 5084.3.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.59 50.0 4.20e-01 90.6% 83.9%
3395729 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 43.0 4.18e-01 75.2% 71.9%
4009646 5084.3.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.58 49.0 3.94e-01 90.6% 70.5%
4027955 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.57 49.0 3.68e-01 91.9% 98.6%
3992499 1100.1.1.1 ↗ beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 0.57 41.0 3.55e-01 74.5% 94.5%
4350660 5087.1.1.0 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 0.57 49.0 3.93e-01 93.3% 83.4%
4014757 9.13.1.4 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.56 40.0 4.19e-01 95.3% 80.0%
3385986 5084.3.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.56 46.0 4.13e-01 85.2% 85.4%
3404731 5084.5.1.37 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.56 45.0 4.22e-01 84.6% 82.2%
874 9.13.1.3 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 0.55 41.0 4.33e-01 75.2% 86.3%
3967771 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.54 38.0 4.08e-01 72.5% 98.5%
3265029 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.54 45.0 3.98e-01 90.6% 75.1%
3952882 331.3.1.27 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 0.54 44.0 4.18e-01 86.6% 86.2%
3961758 331.3.1.7 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.53 38.0 3.81e-01 71.8% 90.0%
4643725 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.53 45.0 4.00e-01 89.9% 96.2%
3875809 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.53 40.0 3.91e-01 78.5% 84.2%
4928158 9.13.1.0 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.52 37.0 3.89e-01 95.3% 81.2%
5018057 9.13.1.0 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.52 38.0 4.09e-01 75.2% 91.1%
2491331 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.51 42.0 4.10e-01 87.9% 90.2%
3203571 9.13.1.4 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.51 38.0 3.91e-01 76.5% 84.3%