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MF959999.1__ATN93346.1__X__00028
Bact-VirMF959999.1__ATN93346.1__X__00028
Identity
- Accession:
- MF959999 ↗
- Kingdom:
- phage
Quality
87.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-279
Domain cluster:
rep: MW651859.1__QSH74601.1__pAN_27__00027__D10-240
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 29.0 | 4.89e-01 | 98.1% | 93.1% |
| 1sziA02 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.76 | 41.0 | 5.53e-01 | 77.9% | 99.3% |
| 3h3mA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.75 | 22.0 | 3.90e-01 | 95.1% | 77.5% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.72 | 29.0 | 4.63e-01 | 82.1% | 96.0% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 26.0 | 4.35e-01 | 79.5% | 88.9% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.72 | 27.0 | 4.26e-01 | 81.4% | 85.4% |
| 4dylA02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.72 | 27.0 | 4.67e-01 | 77.9% | 98.9% |
| 1hciA03 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 30.0 | 4.51e-01 | 100.0% | 87.5% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 28.0 | 4.53e-01 | 95.8% | 91.6% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.71 | 27.0 | 4.13e-01 | 82.9% | 81.2% |
| 1wleA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.71 | 29.0 | 4.42e-01 | 80.2% | 87.7% |
| 6adqG01 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.69 | 38.0 | 4.55e-01 | 71.9% | 77.5% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.69 | 28.0 | 3.57e-01 | 78.7% | 61.5% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.67 | 25.0 | 3.83e-01 | 99.6% | 78.6% |
| 4nx9A01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.65 | 39.0 | 4.99e-01 | 80.6% | 99.4% |
| 1io1A01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.65 | 42.0 | 5.07e-01 | 82.9% | 98.8% |
| 4dk4B00 | 1.10.4010.10 | Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase | 0.65 | 26.0 | 2.86e-01 | 77.6% | 42.4% |
| 3ihuA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.65 | 26.0 | 3.48e-01 | 75.7% | 66.2% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.64 | 27.0 | 3.91e-01 | 75.7% | 84.5% |
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 32.0 | 3.98e-01 | 100.0% | 72.8% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 26.0 | 4.03e-01 | 98.9% | 92.3% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.64 | 25.0 | 4.03e-01 | 100.0% | 93.1% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.63 | 41.0 | 4.81e-01 | 83.3% | 92.0% |
| 6h9xA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.63 | 24.0 | 3.70e-01 | 81.4% | 85.3% |
| 3jrtA00 | 1.20.120.1060 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 39.0 | 4.86e-01 | 77.2% | 98.8% |
| 1dowA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.61 | 38.0 | 4.28e-01 | 77.6% | 79.0% |
| 5figA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 23.0 | 3.58e-01 | 74.9% | 86.0% |
| 2fupA00 | 1.20.58.300 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like | 0.60 | 30.0 | 4.23e-01 | 99.6% | 96.9% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.60 | 20.0 | 3.40e-01 | 90.5% | 85.2% |
| 2c0uA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.60 | 32.0 | 3.89e-01 | 81.4% | 77.5% |
| 3ofnY00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.60 | 25.0 | 3.79e-01 | 79.1% | 88.7% |
| 2ap3A00 | 1.20.120.570 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like | 0.57 | 40.0 | 4.62e-01 | 80.2% | 97.4% |
| 1y1uA01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.57 | 35.0 | 4.04e-01 | 99.2% | 81.5% |
| 4p9fA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.57 | 24.0 | 3.09e-01 | 79.1% | 66.0% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 36.0 | 4.09e-01 | 96.2% | 86.5% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.55 | 19.0 | 2.86e-01 | 85.2% | 69.9% |
| 5mawD00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.54 | 48.0 | 4.86e-01 | 93.5% | 96.9% |
| 1j1jA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.54 | 27.0 | 3.68e-01 | 72.6% | 92.4% |
| 4hyjA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 40.0 | 4.26e-01 | 78.3% | 86.9% |
| 1bf5A01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.52 | 34.0 | 4.13e-01 | 76.4% | 100.0% |
| 6grjB01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.51 | 36.0 | 3.40e-01 | 70.7% | 94.6% |
| 5b08A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 18.0 | 2.81e-01 | 89.0% | 79.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3254000 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.80 | 31.0 | 3.20e-01 | 79.1% | 37.7% |
| 3378097 | 604.1.1.110 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › WIT1_2_N | 0.75 | 32.0 | 4.81e-01 | 100.0% | 89.2% |
| 3387160 | 3755.1.1.8 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › FliJ | 0.74 | 30.0 | 4.28e-01 | 80.2% | 74.3% |
| 4169938 | 3684.1.1.44 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DAHL | 0.72 | 34.0 | 4.98e-01 | 73.4% | 100.0% |
| 3221738 | 192.29.1.172 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF29678 | 0.72 | 37.0 | 4.92e-01 | 74.9% | 91.4% |
| 4974664 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.71 | 34.0 | 4.92e-01 | 75.7% | 98.3% |
| 4441744 | 601.4.1.78 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › DAHL | 0.71 | 37.0 | 5.09e-01 | 76.4% | 100.0% |
| 3716214 | 3755.3.1.6 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Flagellar_rod | 0.67 | 32.0 | 3.96e-01 | 100.0% | 69.1% |
| 2859501 | 601.55.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › anti-complement domain of BBK32 › anti-complement domain of BBK32 | 0.67 | 39.0 | 5.00e-01 | 80.6% | 98.7% |
| 3711300 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.67 | 40.0 | 5.04e-01 | 81.0% | 98.7% |
| 3498964 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.65 | 26.0 | 3.40e-01 | 83.3% | 62.0% |
| 3216453 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.63 | 43.0 | 4.94e-01 | 88.2% | 94.2% |
| 3212831 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.63 | 42.0 | 4.88e-01 | 82.9% | 94.6% |
| 3831792 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.61 | 43.0 | 4.38e-01 | 89.4% | 71.4% |
| 3805395 | 3291.1.1.119 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › NET2A | 0.61 | 33.0 | 3.71e-01 | 100.0% | 65.2% |
| 4002750 | 5086.1.1.118 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › BBS2_hp | 0.61 | 30.0 | 4.14e-01 | 82.1% | 93.1% |
| 3240634 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.61 | 28.0 | 3.66e-01 | 84.0% | 74.2% |
| 4937604 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 28.0 | 4.06e-01 | 74.9% | 97.4% |
| 3228669 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.59 | 38.0 | 4.59e-01 | 80.2% | 98.8% |
| 3706526 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.58 | 28.0 | 3.69e-01 | 84.0% | 79.3% |
| 4525691 | 601.27.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › MW0975(SA0943)-like › MW0975(SA0943)-like › YkyA | 0.58 | 43.0 | 4.85e-01 | 95.4% | 100.0% |
| 3923558 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.58 | 29.0 | 3.49e-01 | 84.0% | 68.1% |
| 3061928 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.58 | 41.0 | 4.82e-01 | 73.4% | 100.0% |
| 4479045 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.58 | 29.0 | 3.14e-01 | 91.6% | 55.9% |
| 4979030 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.58 | 28.0 | 3.70e-01 | 81.4% | 81.4% |
| 3471820 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.58 | 45.0 | 4.76e-01 | 79.1% | 97.0% |
| 3837311 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.57 | 44.0 | 4.57e-01 | 79.1% | 99.2% |
| 4033669 | 601.27.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › MW0975(SA0943)-like › MW0975(SA0943)-like › YkyA | 0.57 | 41.0 | 4.70e-01 | 80.2% | 99.5% |
| None | — | 0.55 | 43.0 | 4.15e-01 | 100.0% | 72.4% | |
| 5037750 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.54 | 31.0 | 3.57e-01 | 84.0% | 73.8% |
| 3921784 | 3684.1.1.27 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › ApoL | 0.54 | 39.0 | 4.28e-01 | 77.6% | 89.3% |
| 3372899 | 3684.1.1.2 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 | 0.54 | 38.0 | 3.98e-01 | 78.3% | 77.1% |
| 3502968 | 3684.1.1.23 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › CA109-like | 0.54 | 39.0 | 4.44e-01 | 83.7% | 99.0% |
| 3739779 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.53 | 29.0 | 3.48e-01 | 84.0% | 75.7% |
| 3797551 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.53 | 41.0 | 4.04e-01 | 99.6% | 72.8% |
| 139558 | 109.1.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › PAT1 | 0.53 | 24.0 | 3.47e-01 | 72.6% | 90.8% |
| 3553833 | 5086.1.1.102 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PTHB1_hp | 0.53 | 37.0 | 4.33e-01 | 76.8% | 98.4% |
| 3447283 | 3684.1.1.10 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DUF677 | 0.53 | 42.0 | 4.15e-01 | 84.0% | 98.6% |
| 4534881 | 192.29.1.162 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DAHL | 0.52 | 38.0 | 4.38e-01 | 79.1% | 100.0% |
| 3937465 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.51 | 30.0 | 3.34e-01 | 90.5% | 69.8% |
| 5009949 | 192.29.1.301 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF973 | 0.51 | 39.0 | 4.31e-01 | 78.7% | 100.0% |
| 4082395 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.51 | 29.0 | 3.50e-01 | 83.3% | 81.7% |
| 3334314 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.51 | 28.0 | 3.37e-01 | 80.2% | 78.8% |
| 4597941 | 3926.1.1.0 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D | 0.51 | 30.0 | 3.41e-01 | 84.0% | 75.3% |