Back to structures

MF975721.1__ATN93613.1__VW6B_9__00009

Bact-Vir

MF975721.1__ATN93613.1__VW6B_9__00009

Identity

Accession:
MF975721 ↗
Kingdom:
phage

Quality

96.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-14_112-171
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26885.1 best Phage_Mu_Gp12 66.2 6.50e-18 100.0% 33.9%
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.69 53.0 5.10e-01 83.6% 88.2%
7pliA03 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.69 52.0 5.18e-01 80.8% 98.7%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.68 53.0 4.01e-01 83.6% 44.9%
1x0pA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 52.0 4.77e-01 83.6% 77.1%
3cjsA00 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.66 48.0 5.26e-01 90.4% 98.3%
3h5xA03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.65 51.0 4.43e-01 86.3% 81.9%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 50.0 4.86e-01 84.9% 92.9%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 50.0 4.85e-01 83.6% 90.1%
2f06A00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.64 53.0 4.26e-01 91.8% 48.6%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.63 55.0 5.43e-01 100.0% 100.0%
6w72A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 55.0 4.57e-01 98.6% 97.7%
2j0wA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 47.0 4.69e-01 80.8% 100.0%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 50.0 4.86e-01 86.3% 97.5%
2ebbA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.62 45.0 4.13e-01 76.7% 70.8%
3ofgB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 49.0 4.72e-01 89.0% 95.4%
4erdA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.62 54.0 4.81e-01 100.0% 85.2%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.62 53.0 4.23e-01 94.5% 68.5%
1usmA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.62 44.0 4.36e-01 75.3% 88.3%
4aukA01 3.30.70.2810 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 50.0 4.91e-01 90.4% 97.5%
1vq8E02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.61 47.0 4.41e-01 84.9% 97.8%
4qjvA03 3.30.70.3110 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 47.0 5.00e-01 84.9% 98.4%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 46.0 4.51e-01 83.6% 85.4%
4dn9B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 45.0 4.19e-01 83.6% 86.6%
1bqnA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.60 45.0 4.26e-01 84.9% 84.0%
1qr0A01 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.60 42.0 3.58e-01 75.3% 96.0%
1zr6A03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.59 52.0 3.83e-01 100.0% 76.8%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 45.0 4.64e-01 83.6% 100.0%
1yrxC01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 51.0 4.58e-01 97.3% 87.5%
4wxaA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.59 42.0 4.04e-01 75.3% 82.1%
2ivfC00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 43.0 3.12e-01 78.1% 62.6%
5yuyA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.59 47.0 4.00e-01 89.0% 77.0%
4lvnP00 3.30.70.2380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 44.0 4.36e-01 86.3% 93.8%
3u6xS00 2.60.40.3320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 46.0 4.10e-01 86.3% 99.0%
3u5eU00 3.30.1360.210 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.58 43.0 3.96e-01 82.2% 90.0%
2c43A01 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.58 41.0 3.32e-01 75.3% 83.2%
2g0iA00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.57 43.0 3.83e-01 83.6% 87.4%
4qmfB01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.57 40.0 3.95e-01 76.7% 81.7%
1yjdC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 3.63e-01 79.5% 82.2%
2xdhA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 44.0 3.58e-01 83.6% 54.3%
5gt8D02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.56 47.0 4.01e-01 93.2% 77.9%
4ae5C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 47.0 3.75e-01 100.0% 78.5%
3n89A01 3.30.310.270 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.55 43.0 3.22e-01 87.7% 63.8%
1vx7X00 3.30.1360.210 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.55 40.0 3.74e-01 80.8% 91.8%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 46.0 4.40e-01 95.9% 97.8%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.55 41.0 3.85e-01 82.2% 88.3%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 46.0 4.22e-01 95.9% 96.9%
6c80A03 3.40.462.10 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain 0.55 47.0 3.38e-01 100.0% 50.2%
1wjwA01 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.54 38.0 3.71e-01 75.3% 94.1%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.54 40.0 3.87e-01 100.0% 69.5%
4kr6A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.54 45.0 3.52e-01 95.9% 88.3%
2pmbA01 3.30.1850.10 Alpha Beta › 2-Layer Sandwich › MCP/YpsA-like › MoCo carrier protein-like 0.54 39.0 3.48e-01 76.7% 84.1%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 36.0 3.40e-01 71.2% 60.0%
3pcoB04 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.52 38.0 3.81e-01 76.7% 81.3%
1vq8E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.51 36.0 3.61e-01 76.7% 92.4%
2nykA02 2.60.40.2530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 38.0 3.65e-01 80.8% 74.7%
2gpyB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 37.0 2.87e-01 82.2% 81.2%
2y23A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 38.0 3.46e-01 83.6% 79.8%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4779977 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 58.0 5.50e-01 93.2% 97.6%
4943463 304.43.1.0 a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 0.67 51.0 4.60e-01 82.2% 81.0%
3602746 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 51.0 5.01e-01 83.6% 88.7%
3529971 327.11.2.18 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DTX3L_KH-like 0.66 47.0 4.61e-01 75.3% 85.0%
3746049 3914.1.1.1 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin 0.66 56.0 3.20e-01 94.5% 66.2%
4980798 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.66 52.0 5.16e-01 84.9% 100.0%
279560 304.115.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in DAHP synthase › Ferredoxin-like domain in DAHP synthase › DAHP_snth_FXD 0.65 51.0 5.23e-01 83.6% 95.6%
4058893 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.65 51.0 4.91e-01 86.3% 92.9%
3877590 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.65 46.0 4.63e-01 75.3% 94.7%
4536686 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.65 50.0 4.87e-01 82.2% 97.5%
4030267 304.110.1.0 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like 0.65 50.0 4.72e-01 84.9% 84.4%
3737984 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.65 55.0 5.01e-01 95.9% 90.0%
3404478 3914.1.1.2 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer 0.64 53.0 3.00e-01 91.8% 67.4%
4385553 304.48.1.48 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 0.64 51.0 3.99e-01 89.0% 59.4%
3686938 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.64 51.0 4.84e-01 86.3% 89.4%
4947154 304.120.1.19 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › THUMP 0.64 49.0 4.77e-01 82.2% 98.8%
3578562 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 49.0 4.51e-01 83.6% 94.7%
3559944 3914.1.1.2 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer 0.64 55.0 3.16e-01 95.9% 68.6%
4976823 305.2.1.0 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.64 45.0 4.54e-01 75.3% 82.7%
4999682 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.63 49.0 4.92e-01 83.6% 88.0%
3271422 304.159.1.0 a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB 0.63 47.0 4.51e-01 80.8% 98.8%
3509710 3122.1.1.1 a+b complex topology › MESD › MESD › MESD › Mesd 0.63 48.0 4.08e-01 83.6% 59.2%
3832146 304.8.1.68 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF493 0.62 48.0 4.42e-01 83.6% 85.3%
4343880 304.28.1.2 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG 0.62 48.0 4.62e-01 84.9% 90.6%
5056043 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.62 48.0 5.00e-01 84.9% 98.5%
4058951 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.62 47.0 4.70e-01 82.2% 97.3%
4991988 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.62 44.0 4.53e-01 75.3% 92.9%
4073171 304.120.1.11 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › UreE_C 0.62 54.0 5.01e-01 98.6% 88.4%
4141111 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.62 46.0 4.61e-01 79.5% 100.0%
4246202 304.56.1.6 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › UreE_C 0.62 54.0 4.97e-01 98.6% 88.4%
4001238 304.34.1.0 a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases 0.62 54.0 5.17e-01 100.0% 94.1%
3213315 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 46.0 4.55e-01 82.2% 98.8%
3515414 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.62 55.0 4.87e-01 100.0% 81.9%
4632150 304.56.1.0 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.62 54.0 4.96e-01 98.6% 88.4%
3291108 304.154.1.1 a+b two layers › Alpha-beta plaits › Regulator of polyketide synthase expression N-terminal domain › Regulator of polyketide synthase expression N-terminal domain › GGDEF_2 0.62 49.0 3.99e-01 90.4% 60.7%
4955445 304.117.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.61 48.0 4.89e-01 84.9% 98.6%
1036625 3122.1.1.1 a+b complex topology › MESD › MESD › MESD › Mesd 0.61 49.0 4.82e-01 89.0% 96.2%
3508538 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.61 43.0 4.25e-01 75.3% 83.7%
3311237 304.52.1.1 a+b two layers › Alpha-beta plaits › YbeD/HP0495-like › YbeD/HP0495-like › DUF493 0.61 46.0 4.28e-01 80.8% 83.3%
3848891 304.151.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF29952 0.61 47.0 4.34e-01 86.3% 84.0%
3387138 304.110.1.0 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like 0.61 49.0 4.88e-01 89.0% 97.3%
4176189 304.52.1.1 a+b two layers › Alpha-beta plaits › YbeD/HP0495-like › YbeD/HP0495-like › DUF493 0.61 45.0 4.30e-01 79.5% 83.5%
1839988 304.110.1.2 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › BLUF 0.60 52.0 4.23e-01 97.3% 77.3%
3893846 304.5.1.25 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › V-ATPase_C 0.60 46.0 4.17e-01 84.9% 95.2%
3931858 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.60 44.0 3.91e-01 76.7% 77.1%
4207299 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.60 46.0 4.60e-01 84.9% 96.0%
4174479 5104.1.1.0 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.60 39.0 3.38e-01 74.0% 42.6%
4940284 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.60 43.0 4.27e-01 75.3% 90.7%
3745161 4323.1.1.2 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V-ATPase_C 0.60 46.0 4.20e-01 84.9% 97.0%
5038034 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.60 45.0 4.25e-01 82.2% 98.9%
4165624 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.60 50.0 4.75e-01 91.8% 90.6%
3865044 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.60 42.0 4.03e-01 75.3% 78.4%
5017294 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.60 42.0 4.25e-01 75.3% 89.3%
3244833 3914.1.1.2 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer 0.60 51.0 2.98e-01 98.6% 76.2%
4026972 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.59 45.0 4.19e-01 84.9% 95.9%
3313948 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.59 42.0 4.12e-01 75.3% 86.3%
4974589 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.59 42.0 4.08e-01 75.3% 79.8%
4928028 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 46.0 4.30e-01 84.9% 94.6%
3389472 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.59 42.0 4.13e-01 75.3% 83.7%
5047612 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.59 42.0 4.21e-01 75.3% 89.3%
3550678 304.48.1.10 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS 0.59 48.0 3.64e-01 90.4% 68.9%
3659633 304.7.1.2 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 0.59 47.0 4.36e-01 90.4% 97.9%
4943445 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.58 46.0 4.61e-01 87.7% 97.3%
3742389 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.58 41.0 4.06e-01 75.3% 82.5%
4666185 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.58 51.0 3.22e-01 100.0% 58.6%
4988647 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.58 41.0 4.11e-01 75.3% 88.0%
1291966 304.7.1.5 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › SUB1_ProdP9 0.58 44.0 4.36e-01 86.3% 93.8%
3369681 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.58 40.0 4.22e-01 74.0% 96.9%
4934435 309.1.1.15 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › DEAD_assoc 0.58 49.0 4.15e-01 98.6% 89.2%
3526003 304.9.1.87 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF30891 0.58 43.0 3.79e-01 82.2% 94.8%
4971598 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.57 40.0 4.05e-01 75.3% 89.3%
5048559 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.57 39.0 3.49e-01 75.3% 49.5%
5030527 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.57 40.0 3.97e-01 75.3% 83.7%
4927941 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.57 46.0 3.13e-01 94.5% 36.1%
4975956 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.57 40.0 3.88e-01 75.3% 81.2%
3552384 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.57 41.0 3.86e-01 75.3% 76.1%
3885545 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.56 40.0 4.23e-01 76.7% 98.5%
5013852 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.56 40.0 3.84e-01 75.3% 84.7%
5055289 309.1.1.15 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › DEAD_assoc 0.56 45.0 3.49e-01 94.5% 89.5%
4297519 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.56 40.0 4.00e-01 75.3% 94.6%
5016697 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.56 39.0 4.04e-01 75.3% 84.3%
5056059 309.1.1.15 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › DEAD_assoc 0.56 45.0 3.64e-01 93.2% 74.4%
4959531 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.55 39.0 4.12e-01 75.3% 90.8%
4933299 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.55 39.0 3.78e-01 75.3% 81.9%
4110545 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.55 39.0 3.25e-01 75.3% 44.6%
4990132 309.1.1.15 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › DEAD_assoc 0.55 44.0 3.35e-01 91.8% 85.6%
3283852 304.48.1.10 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS 0.54 43.0 3.68e-01 90.4% 68.0%
5082143 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.53 45.0 4.08e-01 100.0% 93.3%
4932736 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.52 37.0 3.74e-01 75.3% 74.7%
3403790 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.39e-01 79.5% 81.8%
3497216 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.35e-01 79.5% 81.8%
4171345 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.50 37.0 3.43e-01 79.5% 71.6%
4140374 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.50 36.0 3.46e-01 75.3% 75.3%
D2 high residues 21-109
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26885.1 best Phage_Mu_Gp12 55.8 9.80e-15 100.0% 49.1%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.66 40.0 4.16e-01 100.0% 66.3%
2qv6B02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.63 39.0 3.53e-01 98.9% 45.9%
1x60A01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.63 39.0 4.28e-01 97.8% 77.8%
1utaA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.62 39.0 4.11e-01 100.0% 72.7%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 37.0 4.19e-01 100.0% 83.3%
1vx4407 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 37.0 4.12e-01 98.9% 85.5%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.56 37.0 3.02e-01 100.0% 35.9%
1vdhA01 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.56 41.0 3.75e-01 100.0% 57.9%
1wc1C00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.56 46.0 3.67e-01 93.3% 83.3%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.55 41.0 4.07e-01 96.6% 75.5%
1q7sA00 3.40.1490.10 Alpha Beta › 3-Layer(aba) Sandwich › Bit1 › Bit1 0.55 36.0 3.27e-01 100.0% 49.6%
1f2uB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 41.0 3.51e-01 94.4% 49.7%
2v4jB03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 33.0 3.64e-01 93.3% 80.0%
4ivkA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 47.0 3.09e-01 100.0% 93.6%
1x9zA02 3.30.1370.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain 0.52 33.0 3.34e-01 96.6% 61.8%
2y3uA02 3.30.980.50 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › 0.50 43.0 4.08e-01 100.0% 89.4%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4118694 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.68 41.0 4.48e-01 98.9% 72.0%
4118693 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.66 41.0 4.40e-01 98.9% 73.3%
3800640 5067.1.1.3 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched 0.65 58.0 3.33e-01 100.0% 61.6%
3603400 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.65 40.0 4.36e-01 98.9% 74.7%
3289385 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.63 37.0 4.44e-01 92.1% 100.0%
3529971 327.11.2.18 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DTX3L_KH-like 0.62 40.0 4.23e-01 100.0% 72.5%
3871823 2004.1.1.433 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.62 44.0 2.78e-01 98.9% 13.1%
4124100 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.62 34.0 4.17e-01 92.1% 100.0%
4446761 3433.1.2.0 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain 0.61 36.0 4.26e-01 93.3% 94.5%
3918382 2004.1.1.433 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.61 43.0 2.67e-01 98.9% 12.0%
4631988 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.61 41.0 3.23e-01 100.0% 31.8%
3388102 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 37.0 4.14e-01 97.8% 83.1%
176932 304.25.1.1 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.60 38.0 2.97e-01 98.9% 28.7%
3271422 304.159.1.0 a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB 0.59 42.0 4.29e-01 100.0% 76.5%
3993299 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.59 39.0 3.86e-01 98.9% 64.2%
4322692 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.58 39.0 4.13e-01 100.0% 77.5%
4791706 304.126.1.4 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I_N 0.58 36.0 3.89e-01 98.9% 74.3%
3195155 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.58 36.0 3.91e-01 100.0% 77.1%
4954708 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.56 32.0 3.10e-01 94.4% 47.0%
4068249 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.55 34.0 3.56e-01 100.0% 67.5%
4991973 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 39.0 2.78e-01 74.2% 77.5%
3800478 304.28.1.9 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Patched 0.55 47.0 2.79e-01 100.0% 67.0%
5035888 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.54 38.0 3.88e-01 100.0% 76.5%
4969119 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.54 31.0 3.45e-01 100.0% 73.8%
4982812 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.53 32.0 3.41e-01 100.0% 68.0%
5038034 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.53 37.0 3.76e-01 100.0% 72.2%
3936891 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 29.0 2.91e-01 94.4% 49.5%
3799087 5067.1.1.3 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched 0.51 45.0 2.63e-01 98.9% 15.2%
4954535 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.51 43.0 4.27e-01 100.0% 87.4%
3737802 3914.1.1.0 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain 0.50 44.0 2.66e-01 100.0% 17.1%
4943839 7573.1.1.4 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase 0.50 35.0 2.76e-01 75.3% 52.6%