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MF979562.1__ATS93714.1__P9AB12kb_p005__00005

Bact-Vir

MF979562.1__ATS93714.1__P9AB12kb_p005__00005

Identity

Accession:
MF979562 ↗
Kingdom:
phage

Quality

76.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Astrithrvirus› Pectobacterium_phage_DU_PP_III

TaxID: 2041490

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-130
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4z85A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 46.0 3.93e-01 73.8% 67.0%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.62 42.0 4.39e-01 70.0% 73.8%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 42.0 4.05e-01 70.0% 79.6%
3b5mA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 42.0 4.40e-01 70.0% 95.0%
3szeA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 44.0 3.35e-01 76.9% 70.1%
2x8kA01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.59 41.0 4.50e-01 70.8% 96.2%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995815 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 46.0 4.72e-01 71.5% 89.6%
1725861 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.63 46.0 3.93e-01 73.8% 67.0%
3622133 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.59 48.0 3.88e-01 86.9% 54.0%
1320672 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.58 48.0 3.80e-01 86.9% 51.3%
3259730 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.58 39.0 4.26e-01 70.0% 89.1%
5012011 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 39.0 4.02e-01 72.3% 79.2%
3506871 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.54 43.0 3.05e-01 87.7% 73.8%