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MF979564.1__ATS93993.1__P13BB106kb_p009__00009

Bact-Vir

MF979564.1__ATS93993.1__P13BB106kb_p009__00009

Identity

Accession:
MF979564 ↗
Kingdom:
phage

Quality

81.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Demerecviridae› Hongcheonvirus› Pectobacterium_phage_DU_PP_V

TaxID: 2041492

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-58
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p5vA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.59 43.0 3.86e-01 83.3% 95.2%
7k2tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 35.0 2.36e-01 92.6% 16.5%
3e56A00 6.20.180.10 Special › Other non-globular › Ubiquitin-like (UB roll) › 0.51 41.0 3.85e-01 100.0% 72.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4426624 304.56.1.2 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.63 47.0 4.17e-01 85.2% 83.5%
4929538 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.61 44.0 3.86e-01 79.6% 88.2%
2834134 301.6.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › Tubulin_C 0.52 41.0 2.93e-01 92.6% 66.5%
3194801 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.51 39.0 2.42e-01 96.3% 37.9%