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MG009575.1__ATN93992.1__SEA_KUMAO_29__00029

Bact-Vir

MG009575.1__ATN93992.1__SEA_KUMAO_29__00029

Identity

Accession:
MG009575 ↗
Kingdom:
phage

Quality

88.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vilmaviridae› Kumaovirus› Mycobacterium_phage_Kumao

TaxID: 2041344

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-80
PDB
Domain cluster: representative
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4457541 101.1.2.8 ↗ alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.55 38.0 3.09e-01 73.0% 91.7%
5032993 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.52 41.0 2.87e-01 88.9% 93.8%
D2 medium residues 90-146
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wwwC01 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.70 45.0 4.73e-01 70.2% 73.1%
1zx3A01 1.10.287.1020 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › NE0241-like 0.66 51.0 4.44e-01 82.5% 85.9%
2btoA03 1.10.287.600 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.58 45.0 4.66e-01 87.7% 88.9%
1xb2B01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.53 40.0 3.97e-01 100.0% 80.0%
3waeA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 43.0 3.23e-01 94.7% 59.1%
2ltuA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.52 41.0 4.10e-01 98.2% 91.9%