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MG009575.1__ATN94007.1__SEA_KUMAO_44__00044

Bact-Vir

MG009575.1__ATN94007.1__SEA_KUMAO_44__00044

Identity

Accession:
MG009575 ↗
Kingdom:
phage

Quality

80.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vilmaviridae› Kumaovirus› Mycobacterium_phage_Kumao

TaxID: 2041344

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-79
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1avcA07 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.74 50.0 4.86e-01 70.1% 94.7%
1bc0A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.69 53.0 4.86e-01 82.1% 94.2%
2etjA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.67 49.0 3.41e-01 76.1% 58.6%
2vx2G02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.67 45.0 4.89e-01 77.6% 83.6%
1yj8A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.67 50.0 3.74e-01 92.5% 33.5%
4mdvB03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.65 53.0 4.76e-01 88.1% 94.5%
1n00A01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.59 47.0 4.43e-01 88.1% 90.5%
1b48A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 43.0 3.66e-01 79.1% 79.8%
1dk5A02 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.56 52.0 5.09e-01 100.0% 100.0%
1m9iA01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.55 44.0 4.19e-01 88.1% 91.3%
4evfA01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.55 50.0 4.93e-01 100.0% 100.0%
2ii2A01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.54 48.0 4.84e-01 100.0% 97.1%
1anxA04 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.53 48.0 4.70e-01 100.0% 98.6%
1aowA02 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.52 47.0 4.60e-01 100.0% 97.3%
7kdfB01 1.10.418.60 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Nuf2 subunit 0.52 37.0 2.96e-01 77.6% 46.6%
1n00A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.51 45.0 4.45e-01 100.0% 97.3%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3931794 176.1.1.1 ↗ alpha arrays › Annexin › Annexin › Annexin › Annexin 0.62 50.0 4.59e-01 86.6% 97.6%
4166913 1156.1.1.1 ↗ alpha complex topology › EcoR124I HsdR C-terminal domain › EcoR124I HsdR C-terminal domain › EcoR124I HsdR C-terminal domain › EcoR124_C 0.57 47.0 3.69e-01 91.0% 68.3%
3931796 176.1.1.1 ↗ alpha arrays › Annexin › Annexin › Annexin › Annexin 0.55 45.0 3.96e-01 89.6% 75.0%
3826235 176.1.1.1 ↗ alpha arrays › Annexin › Annexin › Annexin › Annexin 0.55 50.0 4.72e-01 100.0% 96.2%
3496388 176.1.1.0 ↗ alpha arrays › Annexin › Annexin › Annexin 0.54 41.0 3.78e-01 86.6% 97.9%
3906995 176.1.1.1 ↗ alpha arrays › Annexin › Annexin › Annexin › Annexin 0.54 49.0 4.70e-01 100.0% 97.3%
3257170 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 45.0 2.99e-01 100.0% 40.3%
3473495 176.1.1.1 ↗ alpha arrays › Annexin › Annexin › Annexin › Annexin 0.51 47.0 4.30e-01 100.0% 87.1%
1872973 176.1.1.1 ↗ alpha arrays › Annexin › Annexin › Annexin › Annexin 0.50 44.0 4.28e-01 100.0% 97.4%