←Back to structures

MG009575.1__ATN94037.1__SEA_KUMAO_74__00074

Bact-Vir

MG009575.1__ATN94037.1__SEA_KUMAO_74__00074

Identity

Accession:
MG009575 ↗
Kingdom:
phage

Quality

80.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vilmaviridae› Kumaovirus› Mycobacterium_phage_Kumao

TaxID: 2041344

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-118
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6l4lA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.54 38.0 3.57e-01 87.5% 58.8%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587545 375.1.1.198 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_2901 0.77 28.0 4.61e-01 100.0% 95.0%
4031943 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 29.0 4.57e-01 100.0% 97.5%
4400936 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 29.0 4.19e-01 81.2% 84.0%
3942967 375.1.1.9 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.58 33.0 3.86e-01 100.0% 78.8%
3709251 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.55 49.0 3.58e-01 100.0% 93.2%
4015411 4143.1.1.1 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.52 40.0 3.92e-01 82.1% 79.2%
3930204 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.76e-01 78.6% 98.3%