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MG009575.1__ATN94060.1__SEA_KUMAO_98__00097
Bact-VirMG009575.1__ATN94060.1__SEA_KUMAO_98__00097
Identity
- Accession:
- MG009575 ↗
- Kingdom:
- phage
Quality
67.9
mean pLDDT
Taxonomy
TaxID: 2041344
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-56
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7c1hB01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.72 | 47.0 | 3.11e-01 | 91.1% | 17.4% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.70 | 50.0 | 4.23e-01 | 100.0% | 44.9% |
| 2uvaG03 | 3.30.70.3320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 49.0 | 3.76e-01 | 77.8% | 42.6% |
| 1nubA01 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.68 | 46.0 | 3.79e-01 | 86.7% | 39.0% |
| 2c43A01 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.64 | 51.0 | 3.56e-01 | 86.7% | 72.7% |
| 3tvkA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.62 | 52.0 | 3.57e-01 | 100.0% | 34.3% |
| 2x8xX02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.61 | 50.0 | 4.39e-01 | 100.0% | 92.1% |
| 6ks6Z01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.61 | 50.0 | 3.14e-01 | 95.6% | 62.5% |
| 2wtvA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.61 | 51.0 | 3.48e-01 | 95.6% | 85.3% |
| 4i92A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.61 | 51.0 | 3.44e-01 | 100.0% | 83.9% |
| 1f44A01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.61 | 46.0 | 3.09e-01 | 86.7% | 95.9% |
| 3wa7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 51.0 | 2.98e-01 | 100.0% | 71.9% |
| 4yurA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.60 | 50.0 | 3.61e-01 | 95.6% | 83.0% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 41.0 | 3.64e-01 | 100.0% | 52.4% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 39.0 | 3.35e-01 | 71.1% | 46.6% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.54 | 39.0 | 3.48e-01 | 77.8% | 97.0% |
| 1oyiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.44e-01 | 100.0% | 53.2% |
| 1c0gA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.53 | 43.0 | 3.41e-01 | 88.9% | 87.0% |
| 3uoxB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 44.0 | 2.66e-01 | 93.3% | 34.2% |
| 2o0jA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 41.0 | 2.64e-01 | 100.0% | 16.9% |
| 3lrtB01 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 41.0 | 2.99e-01 | 100.0% | 38.3% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 44.0 | 3.51e-01 | 100.0% | 69.2% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3716174 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.69 | 51.0 | 3.87e-01 | 80.0% | 65.5% |
| 3926272 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.66 | 49.0 | 3.39e-01 | 84.4% | 41.2% |
| 4014690 | 7581.1.1.1 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N | 0.65 | 54.0 | 3.40e-01 | 95.6% | 36.5% |
| 3391939 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.64 | 43.0 | 3.30e-01 | 71.1% | 38.3% |
| 3864427 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.64 | 47.0 | 2.91e-01 | 75.6% | 45.9% |
| 3211387 | 327.19.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › Mlh1_C | 0.64 | 51.0 | 4.01e-01 | 93.3% | 91.4% |
| 4942434 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.64 | 51.0 | 4.23e-01 | 100.0% | 54.7% |
| 4932328 | 321.1.1.4 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N | 0.62 | 50.0 | 3.09e-01 | 97.8% | 54.2% |
| 4107410 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.61 | 45.0 | 3.85e-01 | 95.6% | 48.0% |
| 4998201 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.61 | 49.0 | 4.03e-01 | 97.8% | 48.2% |
| 4011414 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.61 | 45.0 | 2.98e-01 | 82.2% | 48.8% |
| 3691304 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.60 | 52.0 | 3.29e-01 | 100.0% | 42.3% |
| 3933937 | 321.1.1.4 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N | 0.60 | 52.0 | 3.17e-01 | 100.0% | 19.7% |
| 5083487 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.60 | 47.0 | 2.93e-01 | 97.8% | 51.2% |
| 3931057 | 558.1.1.0 ↗ | alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain | 0.58 | 48.0 | 4.42e-01 | 93.3% | 95.0% |
| 4021257 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 49.0 | 3.04e-01 | 97.8% | 21.8% |
| 3250268 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 46.0 | 3.03e-01 | 95.6% | 29.5% |
| 3686916 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.55 | 45.0 | 2.91e-01 | 91.1% | 70.7% |
| 4013126 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.53 | 40.0 | 3.40e-01 | 91.1% | 64.4% |
| 3492262 | 327.19.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › Mlh1_C | 0.53 | 42.0 | 3.34e-01 | 91.1% | 88.0% |
| 3231460 | 101.1.4.5 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HNF-1_N | 0.52 | 45.0 | 3.46e-01 | 95.6% | 60.0% |
| 4986639 | 3433.1.2.0 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain | 0.50 | 33.0 | 3.44e-01 | 91.1% | 77.5% |