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MG009575.1__ATN94076.1__SEA_KUMAO_114__00113

Bact-Vir

MG009575.1__ATN94076.1__SEA_KUMAO_114__00113

Identity

Accession:
MG009575 ↗
Kingdom:
phage

Quality

89.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vilmaviridae› Kumaovirus› Mycobacterium_phage_Kumao

TaxID: 2041344

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-55
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7x0fB01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.73 50.0 4.40e-01 71.4% 100.0%
5hsgA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 56.0 4.34e-01 100.0% 80.8%
4dbgB02 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.66 55.0 5.20e-01 98.0% 80.3%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 4.83e-01 85.7% 84.5%
3vskA02 1.10.10.1230 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Penicillin-binding protein, N-terminal non-catalytic domain, head sub-domain 0.64 48.0 3.49e-01 81.6% 48.6%
6wshA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.85e-01 85.7% 83.6%
1qo0D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 5.07e-01 85.7% 100.0%
3rmiA00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.63 42.0 3.30e-01 71.4% 32.4%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 44.0 3.74e-01 77.6% 87.8%
3ne5B04 6.10.140.730 Special › Helix non-globular › Helix Hairpins › 0.61 39.0 3.87e-01 100.0% 62.7%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 37.0 3.33e-01 100.0% 47.8%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 35.0 3.20e-01 75.5% 40.0%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 50.0 3.59e-01 100.0% 89.9%
4uwqB00 2.60.40.2470 Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain 0.55 47.0 3.65e-01 100.0% 79.3%
2azmA01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.54 41.0 3.39e-01 89.8% 65.3%
1fc3B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 46.0 3.66e-01 100.0% 68.3%
2au5A00 1.20.120.590 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › EF2947-like 0.51 43.0 3.23e-01 98.0% 63.6%
4l8kA01 3.30.750.44 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.51 41.0 3.50e-01 95.9% 95.6%
3f2bA07 6.10.140.1510 Special › Helix non-globular › Helix Hairpins › 0.50 39.0 3.36e-01 91.8% 88.4%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3928496 143.1.1.0 ↗ alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain 0.67 56.0 5.32e-01 100.0% 88.3%
3594325 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.66 55.0 5.53e-01 100.0% 98.0%
3278934 103.12.1.1 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.65 54.0 5.18e-01 98.0% 96.7%
3826931 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 55.0 5.35e-01 98.0% 90.9%
3960463 103.12.1.0 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain 0.64 51.0 4.78e-01 87.8% 81.7%
3287744 103.12.1.1 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.64 49.0 4.60e-01 83.7% 80.0%
3936880 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.64 53.0 5.09e-01 100.0% 83.3%
2808686 103.12.1.1 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.64 49.0 4.54e-01 85.7% 76.6%
3951854 103.12.1.1 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.63 51.0 4.83e-01 89.8% 81.7%
3989506 3721.1.1.0 ↗ alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain 0.63 48.0 4.43e-01 87.8% 64.6%
3470217 601.7.1.37 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Las1 0.56 44.0 3.19e-01 87.8% 49.7%
3478592 7568.1.1.6 ↗ a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › RTT107_BRCT_5 0.55 47.0 3.69e-01 98.0% 62.7%
3969984 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 35.0 3.25e-01 98.0% 52.3%
4422561 386.1.1.10 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › MAT1 0.52 45.0 3.87e-01 100.0% 73.8%
3689999 386.1.1.10 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › MAT1 0.50 44.0 4.03e-01 100.0% 90.8%