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MG018926.1__ATW57854.1__CNR33_00008__00008
Bact-VirMG018926.1__ATW57854.1__CNR33_00008__00008
Identity
- Accession:
- MG018926 ↗
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Lindbergviridae›
Tabernariusvirus›
Pseudomonas_phage_tabernarius
TaxID: 2048978
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-72
Domain cluster:
rep: EF153632.1__ABL96783.1__BcepF1.052__00052__D2-62
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o4oA00 | 2.40.128.590 | Mainly Beta › Beta Barrel › Lipocalin › CpcT/CpeT domain | 0.72 | 49.0 | 3.49e-01 | 70.0% | 32.0% |
| 1qh5A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.71 | 58.0 | 3.91e-01 | 90.0% | 51.5% |
| 2p18A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.70 | 60.0 | 4.00e-01 | 95.7% | 52.7% |
| 6dq2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.68 | 56.0 | 3.86e-01 | 92.9% | 76.4% |
| 2w3xB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.68 | 56.0 | 4.45e-01 | 91.4% | 63.9% |
| 3zq4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.66 | 54.0 | 3.59e-01 | 91.4% | 53.8% |
| 2az4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.66 | 53.0 | 3.63e-01 | 91.4% | 67.5% |
| 2opeA00 | 3.30.540.20 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › | 0.65 | 54.0 | 4.55e-01 | 92.9% | 75.8% |
| 6u10A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.64 | 53.0 | 3.60e-01 | 92.9% | 59.5% |
| 5wcmA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.63 | 53.0 | 3.63e-01 | 94.3% | 61.2% |
| 2ownA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 52.0 | 3.54e-01 | 91.4% | 35.2% |
| 6n36A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.63 | 52.0 | 3.59e-01 | 94.3% | 76.2% |
| 3s4kA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 51.0 | 4.27e-01 | 91.4% | 66.1% |
| 4p6zM01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.62 | 56.0 | 4.65e-01 | 100.0% | 69.4% |
| 1c8uA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 51.0 | 3.94e-01 | 90.0% | 56.4% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.62 | 48.0 | 3.06e-01 | 84.3% | 80.3% |
| 3nwzB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 51.0 | 3.97e-01 | 91.4% | 53.6% |
| 4ybvA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 50.0 | 4.22e-01 | 91.4% | 67.8% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.61 | 54.0 | 4.32e-01 | 100.0% | 66.4% |
| 6pfzD02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 47.0 | 3.13e-01 | 100.0% | 22.2% |
| 3e29B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 51.0 | 4.09e-01 | 91.4% | 59.0% |
| 3dkzA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 50.0 | 4.12e-01 | 91.4% | 64.0% |
| 5kkuD00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.60 | 44.0 | 2.99e-01 | 80.0% | 28.5% |
| 2qkpD00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 44.0 | 3.68e-01 | 84.3% | 67.9% |
| 4qfwA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.58 | 52.0 | 3.51e-01 | 100.0% | 78.7% |
| 4uoiC00 | 3.30.160.890 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C | 0.58 | 36.0 | 4.02e-01 | 87.1% | 84.3% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 49.0 | 4.63e-01 | 100.0% | 94.4% |
| 2ov9C01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 47.0 | 3.77e-01 | 92.9% | 53.1% |
| 5vawA01 | 3.30.700.10 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin | 0.57 | 46.0 | 3.99e-01 | 92.9% | 87.9% |
| 6krwA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 46.0 | 3.08e-01 | 91.4% | 25.6% |
| 3u0aA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.57 | 50.0 | 3.43e-01 | 100.0% | 77.7% |
| 2i1yA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 46.0 | 3.07e-01 | 91.4% | 25.4% |
| 3rd7A00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.56 | 44.0 | 3.05e-01 | 91.4% | 26.9% |
| 6obtA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.54 | 46.0 | 3.13e-01 | 94.3% | 44.4% |
| 4mnrA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 44.0 | 3.03e-01 | 98.6% | 95.9% |
| 6kmoB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 39.0 | 2.50e-01 | 75.7% | 24.1% |
| 4qwoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.54 | 44.0 | 3.80e-01 | 100.0% | 70.5% |
| 3vskA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 43.0 | 2.90e-01 | 97.1% | 95.8% |
| 1z94B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 42.0 | 3.35e-01 | 85.7% | 47.6% |
| 6gcdA00 | 3.30.920.90 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › | 0.53 | 41.0 | 3.23e-01 | 85.7% | 43.4% |
| 2kt4B01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 44.0 | 3.67e-01 | 100.0% | 70.4% |
| 1x53A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 43.0 | 3.56e-01 | 95.7% | 65.6% |
| 3p09A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 41.0 | 2.88e-01 | 94.3% | 88.3% |
| 2oc3A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 40.0 | 2.81e-01 | 91.4% | 42.3% |
| 3hlzB01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 46.0 | 3.65e-01 | 100.0% | 54.3% |
| 4dkkA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 35.0 | 3.50e-01 | 87.1% | 70.3% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 44.0 | 3.77e-01 | 98.6% | 67.9% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3967145 | 223.1.1.54 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE4 | 0.72 | 56.0 | 3.80e-01 | 84.3% | 36.5% |
| 3482975 | 223.2.1.7 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N | 0.71 | 59.0 | 4.84e-01 | 90.0% | 51.2% |
| 4464658 | 274.1.1.59 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGG | 0.67 | 56.0 | 4.79e-01 | 92.9% | 62.3% |
| 3784242 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.66 | 55.0 | 3.80e-01 | 91.4% | 38.7% |
| 5064859 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.63 | 51.0 | 3.57e-01 | 90.0% | 80.8% |
| 3866695 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.62 | 54.0 | 4.22e-01 | 100.0% | 68.4% |
| 3364063 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.61 | 54.0 | 4.30e-01 | 100.0% | 75.0% |
| 3834458 | 5084.1.1.27 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2921_N | 0.61 | 53.0 | 4.05e-01 | 100.0% | 77.6% |
| 3426315 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.61 | 48.0 | 4.48e-01 | 90.0% | 90.0% |
| 3507165 | 719.1.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XRCC4 | 0.60 | 49.0 | 4.16e-01 | 100.0% | 52.8% |
| 3244242 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.59 | 48.0 | 3.14e-01 | 91.4% | 22.2% |
| 3627099 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.58 | 48.0 | 3.15e-01 | 90.0% | 38.3% |
| 3924294 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.58 | 47.0 | 3.14e-01 | 91.4% | 24.9% |
| 3594422 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 50.0 | 3.82e-01 | 100.0% | 77.7% |
| 3244221 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.58 | 49.0 | 3.23e-01 | 100.0% | 24.7% |
| 3500787 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.58 | 47.0 | 3.19e-01 | 91.4% | 26.8% |
| 3657881 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.58 | 47.0 | 3.12e-01 | 91.4% | 22.6% |
| 3493588 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.57 | 48.0 | 3.89e-01 | 97.1% | 69.7% |
| 3672898 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.57 | 48.0 | 4.09e-01 | 100.0% | 84.0% |
| 3483990 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.57 | 45.0 | 2.98e-01 | 87.1% | 29.0% |
| 3582030 | 2007.2.3.21 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK | 0.57 | 46.0 | 3.06e-01 | 91.4% | 40.0% |
| 3772335 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.56 | 49.0 | 4.01e-01 | 100.0% | 69.6% |
| 3932878 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.56 | 45.0 | 3.04e-01 | 91.4% | 25.4% |
| 3246533 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.55 | 45.0 | 3.00e-01 | 92.9% | 35.1% |
| None | — | 0.55 | 45.0 | 2.98e-01 | 91.4% | 23.5% | |
| 3942225 | 223.1.1.57 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CSS-motif | 0.55 | 42.0 | 3.10e-01 | 85.7% | 48.1% |
| 3896352 | 632.6.1.14 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Med15_C | 0.55 | 38.0 | 3.30e-01 | 72.9% | 46.4% |
| 3789520 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.54 | 44.0 | 3.71e-01 | 95.7% | 77.0% |
| 3291389 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 45.0 | 3.58e-01 | 97.1% | 91.0% |
| 3713817 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.54 | 43.0 | 2.69e-01 | 88.6% | 72.3% |
| 3586980 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 3.87e-01 | 100.0% | 91.4% |
| 4041054 | 304.135.1.1 ↗ | a+b two layers › Alpha-beta plaits › O-phosphoseryl-tRNA synthetase C-terminal domain › O-phosphoseryl-tRNA synthetase C-terminal domain › SepRS_C | 0.53 | 43.0 | 3.29e-01 | 94.3% | 77.4% |
| 3960286 | 331.1.1.3 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › AlkA_N | 0.53 | 46.0 | 4.36e-01 | 98.6% | 78.8% |
| 4954483 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 44.0 | 3.68e-01 | 94.3% | 72.8% |
| 4981911 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.52 | 42.0 | 3.06e-01 | 95.7% | 83.3% |
| 3797703 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.52 | 40.0 | 2.73e-01 | 90.0% | 36.3% |
| 5019409 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 41.0 | 2.81e-01 | 94.3% | 88.7% |
| 3744550 | 223.2.1.48 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_N, Longin_2 | 0.52 | 43.0 | 3.38e-01 | 97.1% | 64.2% |
| 4030325 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 43.0 | 3.77e-01 | 98.6% | 87.8% |
| 3992448 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.51 | 46.0 | 3.71e-01 | 100.0% | 68.7% |
| 1286181 | 881.1.1.7 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3805 | 0.51 | 46.0 | 3.68e-01 | 100.0% | 55.9% |
| 3785320 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.50 | 43.0 | 3.40e-01 | 100.0% | 79.4% |
| 4938125 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.50 | 36.0 | 3.43e-01 | 82.9% | 62.4% |