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MG018930.1__ATW58263.1__CNR37_00056__00043

Bact-Vir

MG018930.1__ATW58263.1__CNR37_00056__00043

Identity

Accession:
MG018930 ↗
Kingdom:
phage

Quality

70.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 52-116
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 55.0 5.65e-01 100.0% 87.1%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.70 56.0 5.42e-01 100.0% 77.3%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.70 54.0 4.62e-01 100.0% 52.9%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.69 48.0 4.34e-01 72.3% 89.5%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.69 47.0 3.77e-01 70.8% 66.7%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 50.0 5.10e-01 100.0% 78.5%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 56.0 5.60e-01 100.0% 88.1%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.69 59.0 5.38e-01 100.0% 81.1%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 57.0 5.52e-01 100.0% 82.4%
3o2zP00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 50.0 4.14e-01 78.5% 77.6%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.66 57.0 4.56e-01 100.0% 47.7%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 51.0 5.02e-01 86.2% 78.6%
1vw3B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 50.0 4.43e-01 84.6% 57.0%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 47.0 4.92e-01 100.0% 88.1%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.65 48.0 5.09e-01 84.6% 92.9%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 5.06e-01 100.0% 77.3%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 57.0 5.46e-01 100.0% 86.8%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.64 52.0 4.04e-01 100.0% 39.7%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 5.02e-01 100.0% 82.2%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 43.0 3.69e-01 73.8% 76.6%
3m1cB01 3.30.390.170 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.62 46.0 3.95e-01 81.5% 88.1%
1sp4B00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 52.0 3.76e-01 100.0% 38.0%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.60 41.0 4.35e-01 86.2% 85.7%
1lv9A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 45.0 4.55e-01 84.6% 93.8%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.58 45.0 4.46e-01 100.0% 82.9%
2c9oB02 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.58 49.0 4.06e-01 92.3% 55.8%
1a5yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 46.0 3.06e-01 89.2% 44.0%
3g7nB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 47.0 3.15e-01 90.8% 95.3%
3bg3A01 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.57 41.0 3.55e-01 75.4% 94.1%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.57 45.0 2.98e-01 87.7% 42.0%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 46.0 3.99e-01 93.8% 64.2%
4o38A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 50.0 4.34e-01 96.9% 85.4%
3a7fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 44.0 3.94e-01 86.2% 86.0%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.56 40.0 3.48e-01 75.4% 93.1%
3nybA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.56 42.0 3.61e-01 83.1% 82.7%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.55 46.0 4.08e-01 100.0% 76.9%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 45.0 2.93e-01 90.8% 42.9%
3tw6D02 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.55 41.0 3.95e-01 80.0% 94.7%
3wewA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 43.0 3.05e-01 92.3% 71.7%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 3.93e-01 93.8% 68.7%
2xlpB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 48.0 3.02e-01 100.0% 44.9%
2hboA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 42.0 3.42e-01 89.2% 74.4%
4cy8A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 47.0 3.13e-01 100.0% 58.5%
4ghnA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 41.0 3.61e-01 90.8% 84.8%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.52 35.0 3.83e-01 83.1% 95.8%
2p25A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 43.0 3.51e-01 90.8% 83.2%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 39.0 3.00e-01 81.5% 47.7%
4o2zA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 43.0 3.35e-01 95.4% 63.4%
1i1iP02 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.51 42.0 3.32e-01 95.4% 72.2%
4lqzA00 2.40.128.570 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 0.51 42.0 3.42e-01 93.8% 99.2%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 40.0 3.97e-01 87.7% 85.3%
6bu2A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.50 41.0 3.19e-01 92.3% 41.3%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3987601 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 58.0 6.46e-01 95.4% 98.0%
4481026 4.1.1.407 beta barrels › SH3 › SH3 › SH3 › PF29661 0.78 59.0 6.16e-01 100.0% 86.7%
4306285 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 59.0 5.75e-01 100.0% 75.7%
4941620 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 57.0 5.89e-01 100.0% 85.0%
4138563 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 56.0 5.67e-01 100.0% 78.5%
5058103 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 56.0 5.52e-01 100.0% 75.0%
3393358 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 58.0 5.10e-01 100.0% 56.8%
3842363 1.1.5.76 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT 0.75 64.0 5.38e-01 100.0% 56.4%
3742938 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.74 55.0 5.53e-01 98.5% 80.0%
3739064 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 60.0 6.06e-01 100.0% 87.7%
4484893 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 54.0 5.43e-01 100.0% 78.5%
4542692 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 61.0 5.69e-01 100.0% 72.9%
3618716 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.73 52.0 5.42e-01 87.7% 81.7%
4680459 375.1.1.67 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NrdR-like_N 0.73 49.0 5.72e-01 83.1% 100.0%
3770803 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.73 61.0 5.17e-01 100.0% 56.4%
3787905 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 59.0 5.78e-01 98.5% 84.3%
4882787 375.1.1.67 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NrdR-like_N 0.71 47.0 5.46e-01 83.1% 95.7%
4545520 4.7.1.7 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL 0.71 56.0 5.21e-01 100.0% 68.2%
1112010 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.70 56.0 5.42e-01 100.0% 77.3%
4963635 375.1.1.7 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.70 49.0 4.79e-01 83.1% 68.1%
4519674 4.1.1.186 beta barrels › SH3 › SH3 › SH3 › DUF5397 0.70 54.0 5.61e-01 100.0% 93.1%
5051933 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 53.0 3.95e-01 83.1% 45.9%
4207556 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.69 60.0 5.95e-01 100.0% 98.6%
223688 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 44.0 4.95e-01 75.4% 93.3%
4851967 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.69 53.0 5.48e-01 100.0% 90.3%
1144827 4.1.1.79 beta barrels › SH3 › SH3 › SH3 › DUF3601 0.69 59.0 5.40e-01 100.0% 82.0%
4427477 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.20e-01 100.0% 65.3%
3942912 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.68 58.0 5.33e-01 100.0% 72.9%
3167531 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.67 58.0 4.59e-01 100.0% 46.7%
4981041 375.1.1.299 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.67 47.0 5.26e-01 87.7% 96.0%
3283097 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.66 53.0 4.53e-01 100.0% 53.6%
5009170 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 52.0 4.98e-01 86.2% 96.0%
4022025 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.65 57.0 4.40e-01 100.0% 43.4%
3830813 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.65 60.0 4.22e-01 100.0% 41.6%
3609256 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.17e-01 100.0% 72.9%
3784770 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.64 59.0 5.60e-01 100.0% 92.0%
3254316 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.64 49.0 4.45e-01 84.6% 60.0%
3188394 4.8.1.22 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.64 58.0 4.70e-01 100.0% 64.2%
3281618 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.64 57.0 4.96e-01 100.0% 72.0%
4668960 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 56.0 4.72e-01 100.0% 58.2%
591 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.64 53.0 5.07e-01 100.0% 77.6%
4400596 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.64 56.0 4.20e-01 100.0% 40.0%
3445009 103.4.1.0 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.64 43.0 3.15e-01 80.0% 25.7%
4250193 4.1.1.78 beta barrels › SH3 › SH3 › SH3 › TTD 0.64 54.0 4.86e-01 100.0% 68.9%
4618633 4.26.1.1 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.63 47.0 4.94e-01 84.6% 89.8%
3720660 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 52.0 5.01e-01 100.0% 78.7%
4964141 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.62 54.0 4.88e-01 100.0% 72.2%
3495913 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 42.0 4.32e-01 83.1% 76.7%
3598298 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 42.0 4.35e-01 78.5% 80.0%
4966836 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 46.0 4.86e-01 93.8% 100.0%
4185893 4.1.1.394 beta barrels › SH3 › SH3 › SH3 › SlpA 0.59 49.0 4.98e-01 96.9% 98.5%
5065184 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 38.0 4.34e-01 87.7% 97.8%
3496967 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 47.0 3.79e-01 93.8% 63.6%
3927286 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.58 35.0 3.39e-01 84.6% 53.3%
3930110 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.57 46.0 3.01e-01 89.2% 40.3%
3481161 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.57 46.0 3.01e-01 89.2% 42.4%
3479794 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.57 46.0 2.96e-01 89.2% 42.2%
4025894 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 40.0 3.36e-01 75.4% 44.0%
3701501 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 44.0 4.45e-01 90.8% 84.6%
3810543 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.57 46.0 3.98e-01 93.8% 66.4%
5048721 375.1.1.7 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.56 38.0 3.88e-01 80.0% 70.8%
3278325 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.56 46.0 4.80e-01 93.8% 100.0%
3639522 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.56 45.0 3.00e-01 90.8% 53.7%
3742641 220.1.1.58 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.56 46.0 3.95e-01 93.8% 61.8%
3469779 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 44.0 2.87e-01 87.7% 39.4%
3584992 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 45.0 3.15e-01 90.8% 55.6%
4093535 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 49.0 3.92e-01 100.0% 56.2%
3998167 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.55 39.0 2.68e-01 76.9% 33.2%
3627778 220.1.1.64 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.55 44.0 3.94e-01 93.8% 88.0%
3930705 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.54 46.0 4.00e-01 93.8% 62.0%
5058653 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 38.0 3.09e-01 75.4% 89.2%
3259865 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 39.0 2.57e-01 84.6% 22.6%
3925891 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 41.0 3.78e-01 95.4% 74.4%
5039871 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.50 44.0 2.95e-01 100.0% 86.5%