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MG020111.1__ATN94159.1__Lb_50__00050
Bact-VirMG020111.1__ATN94159.1__Lb_50__00050
Identity
- Accession:
- MG020111 ↗
- Kingdom:
- phage
Quality
95.3
mean pLDDT
Taxonomy
TaxID: 2048517
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-104
Domain cluster:
rep: KR905068.1__ALJ97969.1__iA2_27__00027__D3-96
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2d2sA02 | 1.20.58.1220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, C-terminal helical domain | 0.66 | 41.0 | 4.06e-01 | 82.5% | 59.4% |
| 1c17M00 | 1.20.120.220 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ATP synthase, F0 complex, subunit A | 0.63 | 44.0 | 3.88e-01 | 74.2% | 49.3% |
| 8etcb01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 46.0 | 4.05e-01 | 78.4% | 97.3% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 48.0 | 4.72e-01 | 92.8% | 79.6% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 39.0 | 3.73e-01 | 82.5% | 56.2% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.59 | 40.0 | 3.45e-01 | 70.1% | 51.2% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 36.0 | 3.56e-01 | 100.0% | 58.5% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.56 | 37.0 | 3.80e-01 | 85.6% | 69.6% |
| 4b1bA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 50.0 | 3.27e-01 | 99.0% | 85.4% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.55 | 42.0 | 3.79e-01 | 81.4% | 71.4% |
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.55 | 42.0 | 4.09e-01 | 83.5% | 73.4% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.53 | 36.0 | 3.74e-01 | 80.4% | 78.2% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.53 | 34.0 | 3.52e-01 | 73.2% | 70.0% |
| 1u61A00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.52 | 45.0 | 4.09e-01 | 93.8% | 86.6% |
| 3iylB02 | 1.10.2050.10 | Mainly Alpha › Orthogonal Bundle › Protein mu-1, chain B, domain 3 › Protein mu-1, chain B, domain 3 | 0.51 | 43.0 | 3.88e-01 | 91.8% | 88.8% |
| 2wglA00 | 1.10.4190.10 | Mainly Alpha › Orthogonal Bundle › Urease accessory protein UreF › Urease accessory protein UreF | 0.51 | 45.0 | 3.50e-01 | 96.9% | 78.0% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 41.0 | 3.53e-01 | 87.6% | 55.7% |
| 8sbeA02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 40.0 | 3.32e-01 | 92.8% | 44.9% |
| 3oqlC00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.51 | 44.0 | 3.38e-01 | 100.0% | 92.6% |
| 7nc3F01 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 34.0 | 3.27e-01 | 77.3% | 59.6% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3176131 | 142.1.1.5 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI | 0.72 | 49.0 | 4.80e-01 | 100.0% | 64.8% |
| 3993361 | 622.4.1.41 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › DUF7753 | 0.70 | 45.0 | 5.38e-01 | 79.4% | 98.5% |
| 4148492 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.69 | 53.0 | 5.76e-01 | 92.8% | 97.5% |
| 3398929 | 5041.1.1.32 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › TMEM141 | 0.69 | 47.0 | 4.90e-01 | 70.1% | 80.0% |
| 4333013 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.69 | 52.0 | 5.58e-01 | 91.8% | 96.2% |
| 4149728 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.67 | 51.0 | 5.48e-01 | 90.7% | 96.2% |
| 4564044 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.67 | 52.0 | 3.80e-01 | 90.7% | 30.8% |
| 4514462 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.66 | 50.0 | 4.99e-01 | 89.7% | 78.0% |
| 5077460 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 36.0 | 4.22e-01 | 81.4% | 76.5% |
| 3242426 | 5001.1.1.27 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre | 0.65 | 50.0 | 3.58e-01 | 99.0% | 27.5% |
| 3576309 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.61 | 44.0 | 4.44e-01 | 93.8% | 74.0% |
| 4139865 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.59 | 46.0 | 3.47e-01 | 97.9% | 32.9% |
| 3845883 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.58 | 40.0 | 3.88e-01 | 84.5% | 64.8% |
| None | — | 0.58 | 44.0 | 3.31e-01 | 92.8% | 31.2% | |
| 4152306 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.57 | 43.0 | 3.27e-01 | 92.8% | 31.2% |
| 3721687 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.56 | 38.0 | 3.61e-01 | 78.4% | 58.3% |
| 3577937 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.56 | 39.0 | 3.75e-01 | 81.4% | 61.7% |
| 3927006 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.54 | 36.0 | 3.80e-01 | 79.4% | 73.3% |
| 3598977 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.54 | 40.0 | 4.31e-01 | 80.4% | 89.4% |
| 3570028 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.54 | 39.0 | 3.18e-01 | 74.2% | 88.6% |
| 3939553 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.54 | 42.0 | 3.05e-01 | 85.6% | 70.5% |
| 5014452 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.53 | 45.0 | 3.54e-01 | 95.9% | 67.1% |
| 3171096 | 5054.1.1.12 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › NCA2 | 0.53 | 36.0 | 3.02e-01 | 70.1% | 71.2% |
| 4210636 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.53 | 46.0 | 3.63e-01 | 100.0% | 81.8% |
| 3726168 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.52 | 34.0 | 3.31e-01 | 80.4% | 59.1% |
| 3531746 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.51 | 38.0 | 3.77e-01 | 78.4% | 76.2% |
| 3252296 | 601.55.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › anti-complement domain of BBK32 › anti-complement domain of BBK32 › NCA2 | 0.51 | 35.0 | 3.56e-01 | 72.2% | 100.0% |
| 4473674 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.50 | 43.0 | 4.16e-01 | 93.8% | 85.5% |
| 3243599 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.50 | 39.0 | 3.73e-01 | 82.5% | 90.4% |