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MG159787.1__ATS92570.1__GC1_00002__00002

Bact-Vir

MG159787.1__ATS92570.1__GC1_00002__00002

Identity

Accession:
MG159787 ↗
Kingdom:
phage

Quality

91.9 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Tectiliviricetes› Kalamavirales› Tectiviridae› Gammatectivirus› Gluconobacter_phage_GC1

TaxID: 2047788

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-174
PDB
Domain cluster: rep: DNA_polymerase_catalytic_subunit__YP_401712__Human_gammaherpesvirus_4__10376__D288-457
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2py5A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.81 77.0 7.41e-01 99.4% 98.4%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.74 41.0 5.36e-01 96.3% 97.8%
4nlcA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.73 67.0 5.60e-01 100.0% 60.3%
1yt3A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.73 67.0 6.30e-01 100.0% 82.0%
1ewqA02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.73 45.0 5.23e-01 96.3% 85.6%
7jw6A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.72 68.0 6.12e-01 100.0% 85.6%
7jw2A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.72 67.0 6.14e-01 100.0% 88.6%
3safB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.70 66.0 5.44e-01 100.0% 58.6%
1x9mA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.70 66.0 5.82e-01 100.0% 93.4%
1vk0A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.67 59.0 5.50e-01 95.7% 76.5%
1bdp001 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.66 61.0 5.80e-01 100.0% 84.5%
1y97A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.62 57.0 5.37e-01 100.0% 96.5%
7t2sA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.58 52.0 5.16e-01 97.0% 99.4%
3il0A00 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.55 36.0 4.11e-01 70.7% 85.2%
2p1jA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 43.0 4.73e-01 89.0% 99.3%
1zkpC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 43.0 3.80e-01 87.2% 98.8%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 31.0 3.65e-01 99.4% 84.7%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4261005 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.89 86.0 7.10e-01 100.0% 87.9%
3230422 304.48.1.17 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2 0.89 86.0 5.98e-01 100.0% 54.9%
4463772 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.88 85.0 7.03e-01 100.0% 92.1%
4486407 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.87 83.0 7.79e-01 100.0% 99.0%
3506686 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.82 77.0 6.89e-01 98.2% 87.7%
5028008 2484.1.1.132 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo2 0.78 71.0 6.76e-01 95.7% 98.9%
3604297 2484.1.1.68 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.77 72.0 7.07e-01 98.2% 98.9%
4333172 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.74 67.0 6.26e-01 100.0% 78.5%
5038805 2484.1.1.68 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.74 69.0 6.34e-01 98.8% 79.0%
5056095 2484.1.1.68 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.73 69.0 6.41e-01 98.8% 84.4%
1756776 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.73 67.0 5.38e-01 100.0% 53.9%
4541130 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.73 65.0 6.22e-01 100.0% 82.6%
2455432 2484.1.1.68 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.72 68.0 6.20e-01 98.8% 99.0%
3165932 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.72 66.0 5.99e-01 100.0% 74.0%
1168767 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 69.0 6.24e-01 100.0% 100.0%
4188496 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.72 66.0 6.25e-01 100.0% 83.7%
2704792 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.72 68.0 6.01e-01 100.0% 81.4%
2725515 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.72 67.0 6.05e-01 100.0% 85.8%
3937354 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.72 67.0 5.94e-01 100.0% 78.3%
3665458 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.71 64.0 5.94e-01 98.2% 77.2%
3435062 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.71 66.0 5.95e-01 100.0% 78.6%
3956789 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.70 49.0 5.09e-01 100.0% 76.7%
3528675 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.70 65.0 5.74e-01 99.4% 81.3%
3993770 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.70 66.0 5.42e-01 100.0% 58.6%
4995738 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 66.0 5.93e-01 100.0% 80.5%
4882445 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.70 65.0 5.99e-01 100.0% 79.0%
3434621 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.70 65.0 5.39e-01 100.0% 60.0%
3585710 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.69 52.0 5.59e-01 85.4% 88.3%
3927943 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 64.0 5.53e-01 100.0% 74.8%
4959100 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 64.0 5.27e-01 100.0% 64.3%
5042784 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 46.0 5.30e-01 97.6% 95.8%
11148 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 59.0 5.50e-01 95.7% 76.5%
3893443 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.67 63.0 5.64e-01 100.0% 88.6%
4031810 2484.1.1.96 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_polI_exo1 0.66 62.0 5.85e-01 100.0% 84.1%
3497103 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 63.0 5.39e-01 100.0% 81.6%
3491266 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.66 63.0 5.61e-01 100.0% 93.2%
3434598 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 59.0 5.61e-01 97.0% 91.6%
2410148 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 58.0 5.24e-01 100.0% 90.6%
3822649 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.61 56.0 5.12e-01 97.0% 82.8%
5008587 2484.1.1.330 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF460 0.61 49.0 4.06e-01 96.3% 47.9%
4201313 2004.1.1.708 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NAT10_TcmA_helicase, TmcA_N 0.61 43.0 3.10e-01 71.3% 62.2%
3088601 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.60 56.0 5.53e-01 98.2% 97.7%
5041307 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 53.0 4.46e-01 100.0% 59.2%
3710251 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 44.0 4.24e-01 95.7% 71.6%
3720049 2484.1.1.191 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RHSP 0.55 32.0 3.82e-01 100.0% 83.6%
3623868 2484.1.1.107 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1595 0.54 42.0 4.37e-01 86.6% 87.7%
4001973 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 38.0 4.23e-01 82.3% 92.3%
2727465 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.53 42.0 3.39e-01 85.4% 81.1%
3929524 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 42.0 4.16e-01 89.0% 87.2%
4316245 65.1.1.0 ↗ beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.52 19.0 3.23e-01 84.8% 100.0%
4970836 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 40.0 3.75e-01 81.7% 78.0%
2518545 65.1.1.0 ↗ beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.51 23.0 3.38e-01 85.4% 94.6%
5006442 213.1.1.120 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NAT10_TcmA_helicase 0.51 41.0 2.75e-01 83.5% 44.2%
5023640 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.51 25.0 3.37e-01 93.3% 92.4%
D2 high residues 215-227_436-552
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4651639 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.73 68.0 4.84e-01 100.0% 88.1%
D3 medium residues 175-207_353-372
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03175.19 best DNA_pol_B_2 27.4 2.30e-06 71.7% 7.3%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o5rA04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.54 32.0 3.30e-01 88.7% 60.4%
D4 medium residues 373-411
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fzqA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.70 58.0 4.23e-01 97.4% 100.0%
5hmaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 61.0 4.73e-01 100.0% 58.6%
4yo1A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 58.0 4.55e-01 100.0% 52.8%
5hatA01 3.30.70.150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain 0.68 57.0 4.02e-01 100.0% 49.6%
2iteA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 58.0 4.15e-01 100.0% 37.2%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 58.0 4.46e-01 100.0% 50.0%
4ri0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 57.0 3.68e-01 100.0% 26.8%
2yx0A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 57.0 3.35e-01 100.0% 17.6%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 56.0 4.43e-01 97.4% 54.1%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 57.0 4.05e-01 100.0% 38.2%
2av5A00 3.30.70.3250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribonuclease P, Pop5 subunit 0.66 56.0 4.17e-01 100.0% 55.7%
1l1jA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 55.0 4.01e-01 100.0% 39.8%
1arbA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 55.0 3.86e-01 100.0% 54.0%
1yb2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 53.0 3.37e-01 100.0% 27.0%
4mtlA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 54.0 3.47e-01 100.0% 21.2%
2z9iC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 54.0 4.22e-01 100.0% 59.8%
2jsxA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.65 56.0 4.63e-01 100.0% 62.0%
1ep3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.65 54.0 4.13e-01 100.0% 54.5%
1gcyA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 51.0 4.60e-01 92.3% 66.1%
4yhbA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 52.0 3.74e-01 100.0% 58.9%
3bp6B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 51.0 4.01e-01 100.0% 52.0%
4ohvA03 2.40.30.330 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Pre-mRNA cleavage complex subunit Clp1, C-terminal domain 0.64 55.0 4.32e-01 100.0% 80.9%
7ocxC01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 51.0 4.28e-01 100.0% 100.0%
4lvnP00 3.30.70.2380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 53.0 4.26e-01 100.0% 64.2%
4hsqA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 51.0 3.59e-01 100.0% 62.5%
2z30B00 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.62 54.0 4.64e-01 100.0% 63.1%
1fd3A00 3.10.360.10 Alpha Beta › Roll › Antimicrobial Peptide, Beta-defensin 2; Chain A › Antimicrobial Peptide, Beta-defensin 2; Chain A 0.62 44.0 4.44e-01 97.4% 75.6%
1wg1A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.60 49.0 4.14e-01 97.4% 62.0%
1xovA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 48.0 4.12e-01 100.0% 68.1%
2cpqA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.59 49.0 4.30e-01 100.0% 81.2%
2o8mB01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 48.0 4.15e-01 97.4% 60.6%
3su0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 47.0 3.55e-01 97.4% 35.7%
3pf2A01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 47.0 3.21e-01 100.0% 64.6%
2ofhX00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 50.0 4.18e-01 100.0% 67.6%
1scjB00 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.58 48.0 4.05e-01 97.4% 64.8%
2osxA01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 48.0 3.68e-01 100.0% 40.4%
3v6oB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 3.58e-01 100.0% 54.0%
2esnA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 44.0 3.33e-01 100.0% 30.6%
6ahuH01 3.30.70.3250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribonuclease P, Pop5 subunit 0.57 44.0 3.57e-01 100.0% 64.2%
1kj6A00 3.10.360.10 Alpha Beta › Roll › Antimicrobial Peptide, Beta-defensin 2; Chain A › Antimicrobial Peptide, Beta-defensin 2; Chain A 0.57 41.0 4.02e-01 100.0% 71.1%
2e9wB05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.55e-01 100.0% 52.7%
4f0fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 44.0 3.47e-01 100.0% 64.5%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.15e-01 100.0% 59.4%
4gc1A01 2.90.10.10 Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain 0.52 44.0 3.29e-01 100.0% 37.5%
2fpoC00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 39.0 2.75e-01 100.0% 21.5%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4945291 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.73 65.0 5.19e-01 100.0% 69.3%
4948625 2002.1.1.1 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RuBisCO_large 0.71 59.0 3.39e-01 97.4% 15.8%
5011201 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.70 59.0 4.43e-01 94.9% 83.2%
5000681 218.2.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 0.70 58.0 3.96e-01 100.0% 83.2%
3898126 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.69 60.0 4.07e-01 100.0% 26.0%
4338510 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.69 60.0 3.76e-01 100.0% 23.7%
5058558 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 54.0 4.17e-01 100.0% 48.6%
3473567 12.5.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.66 57.0 4.00e-01 100.0% 42.4%
4941378 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 55.0 4.22e-01 100.0% 46.3%
3379093 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.65 56.0 4.62e-01 97.4% 78.6%
3184966 5.1.2.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N 0.65 53.0 3.13e-01 100.0% 11.0%
5064417 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.64 52.0 4.58e-01 94.9% 60.0%
3595343 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.64 55.0 3.48e-01 100.0% 18.5%
3698924 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.63 57.0 3.57e-01 100.0% 19.0%
345108 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 50.0 3.88e-01 100.0% 53.8%
223262 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.62 55.0 4.68e-01 100.0% 63.1%
5029936 304.3.1.1 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.62 53.0 4.50e-01 97.4% 72.3%
3264579 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.62 51.0 3.80e-01 100.0% 43.5%
3733625 2006.1.4.28 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › MKT1_N 0.62 51.0 3.19e-01 100.0% 78.0%
4002123 3110.1.1.3 ↗ a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › AglB_core-like 0.62 52.0 3.35e-01 100.0% 61.0%
3986771 101.1.2.16 ↗ alpha arrays › HTH › HTH › winged helix domain › Rep3_N 0.62 54.0 3.77e-01 100.0% 57.7%
5000700 304.57.1.1 ↗ a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 0.62 51.0 3.82e-01 100.0% 51.8%
3253857 3110.1.1.2 ↗ a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3-PglB_core 0.62 52.0 3.34e-01 100.0% 56.7%
5042715 3352.1.1.1 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 0.62 52.0 2.87e-01 100.0% 23.1%
5070343 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 50.0 4.00e-01 100.0% 68.9%
4029364 3352.1.1.0 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain 0.61 52.0 2.86e-01 100.0% 17.0%
4941642 3352.1.1.0 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain 0.61 52.0 2.99e-01 97.4% 28.1%
3998684 3110.1.1.0 ↗ a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.61 50.0 3.56e-01 100.0% 87.1%
5039609 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.61 53.0 4.41e-01 100.0% 61.4%
4994144 304.7.1.2 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 0.60 49.0 4.33e-01 94.9% 61.7%
5039881 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.59 51.0 4.31e-01 97.4% 60.0%
4985310 304.7.1.2 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 0.59 48.0 4.32e-01 100.0% 66.7%
5065084 3110.1.1.3 ↗ a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › AglB_core-like 0.58 48.0 3.33e-01 100.0% 61.3%
3289909 304.163.1.0 ↗ a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.58 49.0 4.22e-01 100.0% 60.0%
3291483 304.121.1.0 ↗ a+b two layers › Alpha-beta plaits › SP0830-like › SP0830-like 0.57 48.0 3.85e-01 100.0% 57.6%
1553947 12.1.1.44 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_5_C 0.57 48.0 3.86e-01 100.0% 47.6%
4218945 101.1.2.16 ↗ alpha arrays › HTH › HTH › winged helix domain › Rep3_N 0.57 49.0 3.48e-01 100.0% 59.2%
8280 383.1.1.3 ↗ few secondary structure elements › Defensin-like › Defensin-related › Defensin-related › Defensin_beta 0.57 41.0 4.02e-01 100.0% 71.1%
5020886 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.56 48.0 4.24e-01 97.4% 63.3%