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MG189906.1__ATS92306.1__DLP05_144__00143
Bact-VirMG189906.1__ATS92306.1__DLP05_144__00143
Identity
- Accession:
- MG189906 ↗
- Kingdom:
- phage
Quality
55.2
mean pLDDT
Taxonomy
TaxID: 2044561
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-110
D2
high
residues 169-272
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k8kD01 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.70 | 50.0 | 4.42e-01 | 75.0% | 77.5% |
| 3p24A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.69 | 48.0 | 4.26e-01 | 72.1% | 86.3% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.68 | 49.0 | 4.44e-01 | 75.0% | 86.3% |
| 1em2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.64 | 47.0 | 3.77e-01 | 77.9% | 84.6% |
| 3fo5B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.64 | 48.0 | 3.68e-01 | 78.8% | 75.1% |
| 1xkpB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.64 | 50.0 | 4.76e-01 | 83.7% | 86.0% |
| 1ry9A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.63 | 50.0 | 4.62e-01 | 84.6% | 80.5% |
| 3devA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.63 | 52.0 | 5.01e-01 | 87.5% | 92.2% |
| 4ftxB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.62 | 43.0 | 4.01e-01 | 78.8% | 57.8% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.61 | 40.0 | 4.76e-01 | 85.6% | 100.0% |
| 4py9A02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.60 | 50.0 | 4.74e-01 | 90.4% | 90.5% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 34.0 | 3.76e-01 | 83.7% | 70.2% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 40.0 | 3.79e-01 | 73.1% | 59.8% |
| 6u7jA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 42.0 | 4.47e-01 | 75.0% | 97.8% |
| 3bvxA04 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.58 | 39.0 | 2.88e-01 | 70.2% | 87.9% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.57 | 39.0 | 3.67e-01 | 72.1% | 77.0% |
| 2fkiA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.56 | 45.0 | 4.31e-01 | 89.4% | 75.4% |
| 3tu3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 44.0 | 4.28e-01 | 85.6% | 87.4% |
| 1t6lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.56 | 39.0 | 2.96e-01 | 73.1% | 98.4% |
| 1ir6A02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.56 | 46.0 | 4.31e-01 | 90.4% | 82.2% |
| 3p0lD00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 40.0 | 3.37e-01 | 78.8% | 85.9% |
| 2ppqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 40.0 | 4.20e-01 | 79.8% | 100.0% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.52 | 41.0 | 3.81e-01 | 84.6% | 79.4% |
| 3rbyA02 | 2.40.128.310 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain | 0.52 | 40.0 | 4.21e-01 | 80.8% | 92.6% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.52 | 36.0 | 3.62e-01 | 71.2% | 84.0% |
| 2o62A01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 31.0 | 2.89e-01 | 71.2% | 47.3% |
| 2vrsA03 | 2.60.90.40 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.51 | 40.0 | 3.76e-01 | 85.6% | 94.7% |
| 2aaaA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 39.0 | 3.99e-01 | 86.5% | 86.3% |
| 2ijaA00 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.50 | 36.0 | 2.72e-01 | 76.9% | 50.7% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.50 | 33.0 | 3.18e-01 | 82.7% | 58.3% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3290254 | 219.1.1.108 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › TY-Chap3 | 0.71 | 55.0 | 5.11e-01 | 82.7% | 79.2% |
| 3367922 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.70 | 49.0 | 5.15e-01 | 73.1% | 93.7% |
| 4875201 | 3338.1.1.1 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Fragilysin-3 prodomain › Fragilysin-3 prodomain › fragilysinNterm | 0.70 | 49.0 | 4.44e-01 | 72.1% | 87.0% |
| 3367441 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.69 | 48.0 | 4.99e-01 | 73.1% | 88.9% |
| 3345132 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.69 | 47.0 | 4.57e-01 | 70.2% | 96.5% |
| 3434168 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.68 | 49.0 | 4.95e-01 | 75.0% | 100.0% |
| 1309460 | 3338.1.1.1 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Fragilysin-3 prodomain › Fragilysin-3 prodomain › fragilysinNterm | 0.68 | 49.0 | 4.40e-01 | 75.0% | 83.9% |
| 3822351 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.68 | 47.0 | 4.95e-01 | 73.1% | 97.9% |
| 2132714 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.66 | 55.0 | 5.12e-01 | 87.5% | 91.3% |
| 3668463 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.66 | 50.0 | 3.78e-01 | 78.8% | 83.7% |
| 5011833 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.64 | 43.0 | 4.30e-01 | 88.5% | 66.7% |
| 3854043 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.64 | 49.0 | 3.83e-01 | 79.8% | 81.9% |
| 4970387 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 55.0 | 4.56e-01 | 94.2% | 98.9% |
| 4064881 | 241.1.1.7 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Type_III_SycN | 0.64 | 50.0 | 4.76e-01 | 83.7% | 84.6% |
| 5014009 | 11.1.1.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON | 0.63 | 52.0 | 4.55e-01 | 89.4% | 96.2% |
| 4984440 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.63 | 44.0 | 4.72e-01 | 72.1% | 92.0% |
| 4956914 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.63 | 49.0 | 3.75e-01 | 82.7% | 60.4% |
| 4096132 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.62 | 50.0 | 4.88e-01 | 85.6% | 95.7% |
| 3971872 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.62 | 50.0 | 4.72e-01 | 85.6% | 86.2% |
| 4136484 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.62 | 49.0 | 3.57e-01 | 84.6% | 69.3% |
| 5075890 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.62 | 43.0 | 4.60e-01 | 73.1% | 85.6% |
| 3659272 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.61 | 46.0 | 3.38e-01 | 79.8% | 56.5% |
| 5000522 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 44.0 | 3.52e-01 | 76.9% | 70.2% |
| 4961327 | 3264.1.1.0 ↗ | 0.60 | 36.0 | 3.11e-01 | 73.1% | 38.7% | |
| 3808818 | 3016.1.1.10 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › GDC-P | 0.60 | 45.0 | 4.82e-01 | 93.3% | 94.4% |
| 3727965 | 4955.1.1.8 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › AtuA_ferredoxin | 0.59 | 49.0 | 3.72e-01 | 90.4% | 88.2% |
| 3981185 | 241.1.1.25 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF27378 | 0.59 | 47.0 | 4.57e-01 | 84.6% | 82.6% |
| 5068670 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.59 | 48.0 | 4.75e-01 | 86.5% | 94.5% |
| 4972317 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.59 | 49.0 | 3.73e-01 | 90.4% | 64.7% |
| 5012625 | 7535.1.1.1 ↗ | a/b three-layered sandwiches › Dipeptide transport protein › Dipeptide transport protein › Dipeptide transport protein › Peptidase_M55 | 0.59 | 47.0 | 3.48e-01 | 86.5% | 61.8% |
| 3628966 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.59 | 44.0 | 3.49e-01 | 79.8% | 80.0% |
| 4029635 | 241.6.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits | 0.59 | 45.0 | 4.17e-01 | 83.7% | 92.0% |
| 3304155 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.59 | 44.0 | 3.19e-01 | 80.8% | 54.9% |
| 4935566 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.58 | 48.0 | 4.69e-01 | 88.5% | 92.2% |
| 135591 | 265.1.1.4 ↗ | a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › PhiCb5_coat | 0.58 | 40.0 | 3.79e-01 | 73.1% | 59.8% |
| None | — | 0.58 | 49.0 | 4.23e-01 | 90.4% | 96.2% | |
| 3188147 | 4955.1.1.8 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › AtuA_ferredoxin | 0.58 | 49.0 | 4.10e-01 | 93.3% | 99.5% |
| 3507452 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.58 | 47.0 | 3.18e-01 | 88.5% | 50.1% |
| 5079337 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 44.0 | 3.18e-01 | 85.6% | 56.0% |
| 3804630 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 45.0 | 4.28e-01 | 87.5% | 80.8% |
| 10517 | 7535.1.1.1 ↗ | a/b three-layered sandwiches › Dipeptide transport protein › Dipeptide transport protein › Dipeptide transport protein › Peptidase_M55 | 0.56 | 46.0 | 3.42e-01 | 90.4% | 60.2% |
| 4073110 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.55 | 45.0 | 3.35e-01 | 89.4% | 88.1% |
| 4569249 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.55 | 41.0 | 4.43e-01 | 79.8% | 96.7% |
| 3922938 | 5.1.3.25 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid | 0.55 | 47.0 | 3.38e-01 | 94.2% | 45.2% |
| 3496208 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.55 | 42.0 | 2.86e-01 | 84.6% | 74.4% |
| 3457086 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.54 | 43.0 | 3.23e-01 | 87.5% | 63.5% |
| 2138994 | 5.1.3.25 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid | 0.54 | 46.0 | 3.32e-01 | 93.3% | 48.1% |
| 3281348 | 4221.1.1.0 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like | 0.53 | 42.0 | 4.30e-01 | 86.5% | 87.0% |
| 5048714 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.52 | 38.0 | 3.46e-01 | 78.8% | 56.4% |
| 3690503 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.51 | 39.0 | 3.93e-01 | 86.5% | 78.9% |
| 2047874 | 12.3.1.34 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › SOGP_N | 0.51 | 44.0 | 3.24e-01 | 93.3% | 91.4% |
| 3284034 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.51 | 43.0 | 3.50e-01 | 95.2% | 99.0% |
| 4949514 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.51 | 39.0 | 2.75e-01 | 83.7% | 25.3% |
| 3191832 | 12.3.1.36 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF5127 | 0.50 | 40.0 | 2.92e-01 | 83.7% | 85.8% |