←Back to structures
MG189906.1__ATS92344.1__DLP05_039__00038
Bact-VirMG189906.1__ATS92344.1__DLP05_039__00038
Identity
- Accession:
- MG189906 ↗
- Kingdom:
- phage
Quality
64.3
mean pLDDT
Taxonomy
TaxID: 2044561
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-77
Domain cluster:
rep: NC_070786.1__YP_010652457.1__PP460_gp101__00143__DFULL
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4emyA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 51.0 | 3.91e-01 | 96.0% | 50.6% |
| 2yuuA00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.58 | 45.0 | 4.38e-01 | 88.0% | 75.9% |
| 1sqgA03 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.55 | 34.0 | 3.73e-01 | 77.3% | 79.3% |
| 3kreA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.55 | 39.0 | 3.16e-01 | 74.7% | 46.4% |
| 1uu1B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 44.0 | 3.69e-01 | 93.3% | 64.1% |
| 3qh4A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 44.0 | 3.05e-01 | 100.0% | 89.5% |
| 4je5C00 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 44.0 | 2.74e-01 | 100.0% | 27.0% |
| 6ztgA01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.51 | 35.0 | 3.59e-01 | 73.3% | 81.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3993663 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.65 | 48.0 | 4.98e-01 | 84.0% | 84.3% |
| 4426232 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.64 | 35.0 | 3.35e-01 | 82.7% | 44.4% |
| 5024562 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.61 | 51.0 | 4.21e-01 | 92.0% | 83.0% |
| 5011926 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 51.0 | 4.12e-01 | 93.3% | 76.6% |
| 5067595 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.60 | 49.0 | 4.04e-01 | 90.7% | 79.3% |
| 4978010 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.58 | 50.0 | 4.43e-01 | 94.7% | 97.3% |
| 4956648 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.58 | 48.0 | 4.00e-01 | 93.3% | 100.0% |
| 3823898 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 39.0 | 4.35e-01 | 85.3% | 100.0% |
| 3295705 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.54 | 45.0 | 3.73e-01 | 97.3% | 51.1% |
| 4030229 | 381.1.1.2 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Rsm1 | 0.54 | 42.0 | 4.13e-01 | 94.7% | 80.0% |
| 4332042 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 41.0 | 4.20e-01 | 90.7% | 91.4% |
| 4017797 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 37.0 | 3.89e-01 | 86.7% | 84.6% |
| 4189845 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.52 | 42.0 | 3.04e-01 | 86.7% | 60.0% |
| 4499356 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.52 | 32.0 | 3.67e-01 | 82.7% | 90.0% |
| 3213954 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.52 | 33.0 | 2.45e-01 | 100.0% | 25.8% |
| 4959077 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 33.0 | 3.43e-01 | 76.0% | 76.6% |