Back to structures

MG209611.1__ATW59372.1__Cl131_gp104__00104

Bact-Vir

MG209611.1__ATW59372.1__Cl131_gp104__00104

Identity

Accession:
MG209611 ↗
Kingdom:
phage

Quality

79.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 33-85
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.74 56.0 4.55e-01 81.1% 75.0%
5ekdA02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.66 46.0 3.59e-01 79.2% 35.1%
2w0gA00 1.20.58.610 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain 0.62 55.0 4.13e-01 100.0% 74.4%
4zdnA02 1.10.1240.100 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.61 48.0 3.97e-01 86.8% 72.3%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 52.0 4.46e-01 100.0% 71.6%
2rhcA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 48.0 3.03e-01 88.7% 28.0%
3w6zA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.56 48.0 3.77e-01 100.0% 53.7%
3pf6A00 6.10.250.2290 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 38.0 3.75e-01 83.0% 68.3%
2p67A01 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.51 34.0 3.43e-01 71.7% 69.2%
3ucxA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 39.0 2.64e-01 96.2% 19.4%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5012232 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.78 53.0 5.31e-01 77.4% 69.1%
3973493 101.1.11.2 alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 0.77 52.0 4.84e-01 75.5% 56.9%
5074942 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.77 55.0 4.84e-01 77.4% 53.3%
5045263 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.76 62.0 5.40e-01 100.0% 58.7%
4994233 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.76 54.0 4.71e-01 77.4% 50.0%
4970117 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.75 54.0 4.44e-01 77.4% 44.4%
2625223 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.75 53.0 5.32e-01 83.0% 72.7%
3953501 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.71 53.0 4.82e-01 84.9% 60.0%
5025690 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.71 51.0 5.13e-01 77.4% 75.9%
4946063 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.71 55.0 5.52e-01 84.9% 81.8%
4928595 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.66 55.0 4.39e-01 92.5% 48.6%
5076351 2004.1.1.188 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 0.64 49.0 3.37e-01 83.0% 72.1%
4220958 2004.1.1.188 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 0.61 53.0 3.67e-01 98.1% 75.0%
4958195 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 35.0 3.50e-01 75.5% 60.0%
4876378 2485.1.1.9 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › 2Fe-2S_thioredx 0.55 41.0 3.71e-01 86.8% 92.5%