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MG209611.1__ATW59407.1__Cl131_gp139__00139

Bact-Vir

MG209611.1__ATW59407.1__Cl131_gp139__00139

Identity

Accession:
MG209611 ↗
Kingdom:
phage

Quality

84.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-107
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.68 50.0 4.91e-01 80.5% 71.4%
1mw7A02 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.66 40.0 3.83e-01 85.7% 52.9%
1konA02 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.65 39.0 3.72e-01 87.0% 51.1%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 52.0 4.32e-01 90.9% 78.5%
5ay6A01 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.63 56.0 4.36e-01 100.0% 97.7%
1e3hA01 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.63 49.0 3.50e-01 87.0% 98.0%
4q8gA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 57.0 3.65e-01 100.0% 27.6%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 43.0 3.49e-01 72.7% 76.5%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.61 46.0 3.82e-01 81.8% 47.2%
3d22A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 48.0 4.09e-01 85.7% 89.1%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 50.0 4.05e-01 92.2% 90.4%
4za3A01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.61 50.0 3.93e-01 89.6% 85.3%
3d2uE01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.61 42.0 3.23e-01 72.7% 88.8%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.81e-01 98.7% 92.6%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.60 53.0 4.53e-01 98.7% 75.0%
2wvxA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 44.0 2.93e-01 77.9% 69.6%
1y4wA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 49.0 3.21e-01 92.2% 92.7%
5eoxB03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 41.0 3.46e-01 71.4% 97.7%
2i02A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 41.0 3.40e-01 72.7% 75.0%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.59 43.0 3.58e-01 100.0% 43.2%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 40.0 3.17e-01 71.4% 69.6%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 50.0 3.07e-01 92.2% 97.2%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.59 50.0 3.62e-01 98.7% 86.3%
5u81A01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.59 40.0 2.86e-01 72.7% 62.9%
3vv1A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 52.0 4.25e-01 100.0% 68.8%
6dxwA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.58 49.0 3.54e-01 94.8% 74.7%
5gm0A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 51.0 4.33e-01 100.0% 77.7%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.58 52.0 3.41e-01 98.7% 89.8%
4a2bA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 43.0 4.03e-01 79.2% 92.6%
1jg5A00 3.30.1410.10 Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP 0.58 39.0 3.84e-01 70.1% 83.1%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.52e-01 100.0% 91.2%
6e20A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 51.0 4.27e-01 100.0% 79.5%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 51.0 4.11e-01 100.0% 86.5%
2f7vA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.57 47.0 3.43e-01 97.4% 96.0%
4m78N00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.35e-01 100.0% 87.3%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 47.0 3.77e-01 92.2% 87.7%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 42.0 4.36e-01 100.0% 90.1%
4pswB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 48.0 3.06e-01 94.8% 84.4%
2fp8B00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 46.0 3.16e-01 94.8% 89.8%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 3.63e-01 93.5% 99.4%
4lduA02 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.55 46.0 4.21e-01 98.7% 68.9%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 47.0 4.68e-01 100.0% 91.4%
4ns4A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 40.0 2.76e-01 77.9% 34.3%
4j56E00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 45.0 4.11e-01 92.2% 99.0%
1w4vA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 44.0 3.95e-01 90.9% 97.3%
5ykwA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 43.0 3.94e-01 90.9% 100.0%
5gtqA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 44.0 3.07e-01 97.4% 94.1%
1avgI00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 45.0 3.73e-01 94.8% 88.7%
2odpA03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 41.0 3.29e-01 85.7% 90.3%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 35.0 3.49e-01 70.1% 85.9%
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 43.0 2.86e-01 94.8% 76.9%
2hdwA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 38.0 2.76e-01 76.6% 57.0%
4cw9B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 42.0 3.84e-01 92.2% 100.0%
3ei3B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 2.93e-01 97.4% 93.0%
3e4vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 38.0 3.05e-01 84.4% 78.2%
1t6cA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.51 37.0 2.87e-01 79.2% 87.8%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3938106 9.15.1.0 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 0.74 66.0 5.36e-01 100.0% 62.1%
4564828 4026.1.1.1 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.69 55.0 4.40e-01 87.0% 49.0%
3531867 4026.1.1.1 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.69 55.0 4.19e-01 87.0% 42.2%
5058109 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.69 48.0 4.57e-01 74.0% 62.2%
4936963 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 46.0 4.52e-01 70.1% 63.5%
4009799 274.1.1.4 a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI 0.68 49.0 4.38e-01 80.5% 54.3%
3385471 4998.1.1.0 beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain 0.68 60.0 4.87e-01 97.4% 93.8%
3831707 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.68 53.0 3.39e-01 83.1% 35.5%
4944011 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.67 50.0 4.79e-01 80.5% 81.1%
3818556 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.67 51.0 3.34e-01 81.8% 28.0%
3995759 4.1.1.284 beta barrels › SH3 › SH3 › SH3 › SBNO 0.66 50.0 4.33e-01 93.5% 52.5%
3419193 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.65 49.0 3.63e-01 81.8% 55.2%
3750158 9.15.1.1 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.65 56.0 4.41e-01 100.0% 70.9%
3496143 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.65 52.0 4.24e-01 87.0% 52.4%
3615961 9.15.1.1 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.65 56.0 4.40e-01 100.0% 74.9%
3840565 9.15.1.0 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 0.65 55.0 4.45e-01 100.0% 71.5%
3797697 9.15.1.0 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 0.65 55.0 4.34e-01 100.0% 73.2%
3258675 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.65 52.0 4.26e-01 87.0% 54.3%
4313699 4007.1.1.1 a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg 0.64 40.0 3.59e-01 89.6% 45.7%
3854230 269.1.1.1 a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.64 56.0 3.68e-01 100.0% 48.2%
5073672 4252.1.1.7 beta barrels › AttH-like › AttH-like › AttH-like › Tocopherol_cycl 0.64 53.0 4.06e-01 93.5% 89.2%
3605877 109.4.1.1164 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › zf-MYND 0.63 47.0 3.02e-01 79.2% 33.2%
3526900 269.1.1.0 a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like 0.63 54.0 3.48e-01 100.0% 41.2%
3464481 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.62 48.0 3.09e-01 84.4% 68.3%
3221153 9.15.1.1 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.62 52.0 4.12e-01 100.0% 75.1%
3414544 11.1.3.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like 0.62 49.0 3.84e-01 85.7% 100.0%
3439915 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.61 48.0 3.23e-01 84.4% 39.3%
5021454 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.61 53.0 4.01e-01 97.4% 86.8%
4957228 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.61 53.0 4.56e-01 100.0% 96.2%
3721216 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.61 43.0 2.87e-01 74.0% 34.1%
3183793 7579.1.1.42 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 0.61 42.0 2.81e-01 71.4% 36.6%
3461499 3459.1.1.3 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.60 52.0 4.49e-01 94.8% 100.0%
3758536 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.68e-01 98.7% 88.6%
3684014 3459.1.1.3 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.60 54.0 4.54e-01 100.0% 96.2%
3458164 3459.1.1.3 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.60 53.0 4.76e-01 100.0% 94.5%
5050662 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.59 48.0 3.84e-01 90.9% 84.7%
4203230 5.1.3.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.59 51.0 3.83e-01 94.8% 55.1%
3576406 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.59 45.0 3.69e-01 83.1% 45.0%
None 0.59 41.0 2.73e-01 74.0% 35.0%
363009 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.58 47.0 3.08e-01 88.3% 84.3%
3852891 3164.1.1.0 few secondary structure elements › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein 0.58 41.0 2.99e-01 75.3% 40.9%
3176816 4252.1.1.5 beta barrels › AttH-like › AttH-like › AttH-like › Svf1 0.57 46.0 3.72e-01 88.3% 91.3%
3601992 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.57 40.0 2.71e-01 72.7% 35.9%
3254669 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.57 48.0 3.01e-01 100.0% 30.1%
3257391 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.57 41.0 2.84e-01 75.3% 39.2%
3638068 5.1.4.426 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CAF1C_H4-bd, ANAPC4_WD40 0.56 44.0 2.77e-01 87.0% 80.2%
3818615 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.56 44.0 2.94e-01 87.0% 97.3%
3193518 5.1.4.5 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,CAF1C_H4-bd 0.56 43.0 2.72e-01 83.1% 41.9%
4182578 4252.1.1.5 beta barrels › AttH-like › AttH-like › AttH-like › Svf1 0.56 45.0 3.45e-01 90.9% 83.4%
4021054 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.55 44.0 3.51e-01 89.6% 65.5%
5003966 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.55 42.0 4.52e-01 88.3% 98.5%
1688207 5.1.3.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.55 46.0 3.14e-01 96.1% 94.5%
3718555 7579.1.1.44 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 0.54 40.0 2.68e-01 79.2% 38.1%
3924404 7579.1.1.102 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9, Hydrolase_4 0.54 43.0 3.01e-01 93.5% 34.6%
3217785 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.54 46.0 3.77e-01 100.0% 70.3%
1921556 209.1.3.0 a+b complex topology › C-type lectin-like › C-type lectin-like 0.54 38.0 2.89e-01 76.6% 79.9%
3315173 243.3.1.46 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SWIM 0.53 39.0 3.46e-01 85.7% 53.0%
3608938 220.1.1.167 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29707 0.53 41.0 3.65e-01 87.0% 63.5%
3951374 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.51 45.0 4.07e-01 100.0% 81.9%
3230356 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.51 42.0 2.58e-01 94.8% 72.4%
3281870 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.51 42.0 3.53e-01 98.7% 52.6%
3914857 3435.1.1.2 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N 0.50 43.0 3.76e-01 100.0% 72.8%
3781646 3435.1.1.0 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.50 39.0 2.69e-01 83.1% 47.7%
D2 high residues 123-189
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.69 59.0 3.73e-01 98.5% 98.1%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.66 58.0 4.38e-01 100.0% 86.7%
1odhA01 2.20.25.670 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › GCM domain, large subdomain 0.65 53.0 5.21e-01 89.6% 90.1%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 53.0 3.44e-01 89.6% 75.6%
5vawA01 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.62 45.0 3.81e-01 77.6% 87.9%
3zxjA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 53.0 3.52e-01 100.0% 92.6%
3bxwA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 41.0 4.38e-01 71.6% 83.6%
2konA00 3.30.160.350 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 43.0 4.06e-01 76.1% 85.4%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.60 51.0 4.08e-01 100.0% 79.9%
6nhsA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 51.0 3.57e-01 100.0% 90.0%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 50.0 3.27e-01 97.0% 98.8%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 41.0 4.18e-01 73.1% 84.4%
3rwxA01 2.40.128.340 Mainly Beta › Beta Barrel › Lipocalin › 0.59 45.0 3.74e-01 82.1% 78.3%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 46.0 3.76e-01 89.6% 74.6%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 39.0 3.38e-01 70.1% 83.8%
2l2fA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.58 40.0 3.56e-01 74.6% 87.0%
3r7wB02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.58 51.0 4.24e-01 100.0% 81.4%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 41.0 3.93e-01 76.1% 70.0%
1x53A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 45.0 3.74e-01 89.6% 74.0%
5jh8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.57 39.0 3.95e-01 71.6% 94.0%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.57 38.0 4.03e-01 71.6% 80.7%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.57 45.0 4.12e-01 86.6% 78.7%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.57 39.0 3.82e-01 73.1% 82.9%
1mwsA04 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 46.0 3.07e-01 100.0% 89.4%
4lduA02 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.56 46.0 3.96e-01 94.0% 57.5%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.55 43.0 3.91e-01 91.0% 72.5%
5os9A00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.55 41.0 3.52e-01 88.1% 47.8%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 42.0 3.28e-01 83.6% 81.9%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.54 44.0 3.57e-01 91.0% 67.9%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 37.0 3.85e-01 73.1% 92.1%
2ehbD00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.54 42.0 3.56e-01 91.0% 71.4%
2ebmA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.54 40.0 3.28e-01 80.6% 50.8%
1f0lA03 2.60.40.700 Mainly Beta › Sandwich › Immunoglobulin-like › Diphtheria toxin, receptor-binding domain 0.54 44.0 3.42e-01 92.5% 86.4%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.53 45.0 2.87e-01 92.5% 30.2%
2jzlA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.53 37.0 3.30e-01 76.1% 74.8%
3jvvA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 41.0 3.71e-01 89.6% 82.0%
1wsrA02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.53 40.0 3.77e-01 88.1% 68.1%
5fl3A01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 40.0 3.66e-01 89.6% 82.0%
2ewvA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 40.0 3.64e-01 89.6% 81.4%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.52 41.0 3.60e-01 94.0% 54.9%
2basA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 44.0 3.73e-01 97.0% 87.9%
2lkoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 38.0 3.03e-01 79.1% 62.3%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 38.0 3.46e-01 100.0% 56.1%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.37e-01 92.5% 69.0%
2r78C00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 41.0 3.51e-01 91.0% 86.2%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.57e-01 91.0% 67.0%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.51 45.0 3.60e-01 100.0% 75.0%
3vmaA03 3.30.2060.10 Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain 0.51 41.0 3.87e-01 100.0% 85.6%
4gw9A02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 41.0 3.71e-01 91.0% 96.7%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4309285 3844.2.1.2 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › DUF5081 0.68 60.0 4.38e-01 100.0% 60.5%
4961004 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.68 54.0 5.39e-01 88.1% 85.7%
3583296 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 45.0 4.43e-01 73.1% 90.0%
3907176 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.64 45.0 4.11e-01 74.6% 70.0%
3495496 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 41.0 3.88e-01 98.5% 56.2%
3626068 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 42.0 4.42e-01 70.1% 100.0%
4946589 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.61 51.0 3.88e-01 98.5% 78.3%
3169357 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.61 50.0 4.26e-01 91.0% 66.4%
3788173 2003.1.3.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FMO-like 0.60 50.0 2.98e-01 92.5% 24.2%
4384965 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.60 48.0 4.55e-01 88.1% 100.0%
3629627 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.59 47.0 4.58e-01 88.1% 90.7%
3913070 331.4.1.3 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AdenylateSensor 0.58 45.0 4.13e-01 83.6% 77.3%
5003966 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.58 36.0 3.69e-01 73.1% 64.6%
3390155 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.57 45.0 4.15e-01 89.6% 65.9%
3727583 206.1.1.15 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Fructosamin_kin 0.57 47.0 3.04e-01 95.5% 63.1%
4054953 331.3.1.8 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 0.57 46.0 3.88e-01 95.5% 66.9%
3697201 5.1.2.20 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BMT 0.57 49.0 2.98e-01 100.0% 93.5%
3806930 1.1.11.1 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.57 40.0 3.59e-01 94.0% 51.0%
5077064 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.56 42.0 2.74e-01 80.6% 38.7%
4356238 3222.1.1.1 a+b complex topology › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › AceK_regulatory 0.56 43.0 2.86e-01 85.1% 31.1%
4653150 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.56 43.0 3.76e-01 86.6% 90.0%
4666593 241.1.1.2 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.56 44.0 3.47e-01 91.0% 72.3%
3472973 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.56 48.0 3.56e-01 97.0% 77.1%
4023931 331.1.1.1 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.55 43.0 4.00e-01 89.6% 68.9%
4984586 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.55 44.0 3.79e-01 89.6% 71.8%
3892746 5.1.4.13 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.55 43.0 2.79e-01 92.5% 96.9%
3521820 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.55 43.0 3.02e-01 88.1% 26.8%
5056218 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.54 35.0 3.54e-01 82.1% 64.3%
4031151 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.54 37.0 3.61e-01 71.6% 81.3%
3772335 223.2.1.32 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 0.54 46.0 3.79e-01 100.0% 65.9%
None 0.54 42.0 3.01e-01 88.1% 28.0%
4977517 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.53 37.0 3.63e-01 74.6% 77.3%
3914739 223.1.1.78 a+b three layers › Profilin-like › sensor domains › sensor domains › GPR158_179_EC 0.53 43.0 3.03e-01 88.1% 59.0%
4949742 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.53 42.0 3.45e-01 89.6% 80.8%
4944869 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 46.0 3.76e-01 100.0% 68.5%
3531090 223.2.1.6 a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.52 44.0 3.37e-01 100.0% 53.1%
6840 223.1.1.19 a+b three layers › Profilin-like › sensor domains › sensor domains › YkuI_C 0.52 44.0 3.50e-01 97.0% 70.3%
4236083 10.1.1.11 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.52 40.0 2.74e-01 85.1% 60.8%
3482507 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.51 42.0 2.54e-01 89.6% 91.2%
3572707 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 45.0 3.71e-01 100.0% 80.0%
4927398 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.51 42.0 3.30e-01 95.5% 72.9%
1320520 243.16.1.1 a+b two layers › Cystatin-like › hypothetical protein CLOLEP_02462 › hypothetical protein CLOLEP_02462 › DUF6836 0.51 35.0 3.12e-01 71.6% 67.3%
5064859 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 37.0 2.65e-01 82.1% 53.8%
3647873 1.1.11.1 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.51 40.0 3.49e-01 89.6% 56.2%
3788332 223.2.1.18 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 0.51 42.0 3.25e-01 100.0% 55.2%
3593291 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 43.0 3.42e-01 100.0% 64.1%