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MG214783.2__ATS92137.1__HMSP1_94__00093
Bact-VirMG214783.2__ATS92137.1__HMSP1_94__00093
Identity
- Accession:
- MG214783 ↗
- Kingdom:
- phage
Quality
76.6
mean pLDDT
Taxonomy
TaxID: 2049306
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-75
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4yhbA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.66 | 46.0 | 3.61e-01 | 89.8% | 33.3% |
| 5t3uB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.64 | 54.0 | 4.27e-01 | 100.0% | 44.4% |
| 1qe0A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.62 | 44.0 | 3.90e-01 | 100.0% | 50.5% |
| 3mtqB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.61 | 50.0 | 3.98e-01 | 98.3% | 58.4% |
| 5im4F00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.61 | 49.0 | 4.01e-01 | 100.0% | 44.3% |
| 3c97A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 40.0 | 4.02e-01 | 100.0% | 67.2% |
| 6feaB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.61 | 52.0 | 3.98e-01 | 100.0% | 72.6% |
| 4hwtA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.60 | 44.0 | 3.69e-01 | 100.0% | 42.7% |
| 4c0hA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 50.0 | 3.46e-01 | 100.0% | 63.8% |
| 3fvwB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.59 | 52.0 | 3.69e-01 | 100.0% | 58.2% |
| 1zu4A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 51.0 | 3.51e-01 | 100.0% | 53.2% |
| 3mw8A01 | 3.40.50.10090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 43.0 | 3.61e-01 | 100.0% | 42.7% |
| 1yx1A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.58 | 48.0 | 3.29e-01 | 100.0% | 58.8% |
| 2oqrA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 40.0 | 3.75e-01 | 100.0% | 56.2% |
| 4tkzA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.58 | 48.0 | 3.88e-01 | 100.0% | 62.3% |
| 1pdoA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.57 | 45.0 | 3.67e-01 | 100.0% | 43.4% |
| 1vpyA00 | 3.20.20.410 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Protein of unknown function UPF0759 | 0.56 | 49.0 | 3.26e-01 | 100.0% | 98.4% |
| 3i6dA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 48.0 | 3.62e-01 | 100.0% | 62.4% |
| 1u0mA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 44.0 | 3.10e-01 | 89.8% | 47.0% |
| 5b7yA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.55 | 45.0 | 3.07e-01 | 100.0% | 65.1% |
| 1ufoA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 46.0 | 3.18e-01 | 100.0% | 53.6% |
| 3t38A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 49.0 | 3.82e-01 | 100.0% | 93.0% |
| 4q8rA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 44.0 | 3.61e-01 | 89.8% | 71.9% |
| 1e5mA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 40.0 | 2.70e-01 | 79.7% | 31.9% |
| 5lqdD01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 46.0 | 3.16e-01 | 100.0% | 96.2% |
| 3ahcA02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.55 | 44.0 | 3.02e-01 | 89.8% | 56.0% |
| 3bl4A02 | 3.40.970.30 | Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › yp_829618.1 like domains | 0.55 | 36.0 | 3.87e-01 | 100.0% | 85.4% |
| 1o98A02 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.55 | 44.0 | 2.96e-01 | 94.9% | 58.8% |
| 1ispA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 44.0 | 3.30e-01 | 100.0% | 58.1% |
| 6bjaA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.54 | 40.0 | 2.89e-01 | 84.7% | 65.8% |
| 3lyhA00 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 44.0 | 3.57e-01 | 93.2% | 79.2% |
| 2zyhA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 43.0 | 3.08e-01 | 100.0% | 48.2% |
| 4c2jA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 41.0 | 2.91e-01 | 89.8% | 64.9% |
| 1afwB01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 41.0 | 2.87e-01 | 89.8% | 62.9% |
| 3hbaA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 45.0 | 3.67e-01 | 100.0% | 83.5% |
| 2npnA01 | 3.40.1010.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain | 0.52 | 45.0 | 3.57e-01 | 100.0% | 46.5% |
| 3mebA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 43.0 | 2.88e-01 | 100.0% | 22.0% |
| 2xvyA02 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 44.0 | 3.54e-01 | 100.0% | 87.1% |
| 3sxuB00 | 3.40.50.10220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › DNA polymerase III, psi subunit | 0.51 | 42.0 | 3.67e-01 | 100.0% | 92.2% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.51 | 43.0 | 3.14e-01 | 100.0% | 58.1% |
| 3mc2A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 42.0 | 3.12e-01 | 98.3% | 59.8% |
| 3e9kA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 42.0 | 2.81e-01 | 100.0% | 23.8% |
| 2nxvA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 42.0 | 2.92e-01 | 100.0% | 62.2% |
| 2c83A01 | 3.40.50.11120 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sialyltransferase, N-terminal GT-B Rossman nucleotide-binding domain | 0.50 | 40.0 | 2.92e-01 | 100.0% | 35.1% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3960173 | 2007.1.19.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Acyl_transf_1 | 0.84 | 72.0 | 4.95e-01 | 94.9% | 29.7% |
| 4018418 | 2007.1.19.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Acyl_transf_1 | 0.75 | 65.0 | 4.13e-01 | 100.0% | 20.0% |
| 3587536 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.64 | 50.0 | 3.98e-01 | 100.0% | 40.0% |
| 3719699 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.63 | 53.0 | 3.61e-01 | 100.0% | 29.2% |
| 4971974 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 52.0 | 3.97e-01 | 100.0% | 65.0% |
| 3982826 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.62 | 48.0 | 3.87e-01 | 100.0% | 40.0% |
| 3589377 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.61 | 50.0 | 4.01e-01 | 100.0% | 43.8% |
| 2049835 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.60 | 50.0 | 3.85e-01 | 100.0% | 43.8% |
| 3201616 | 2004.1.1.598 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF29907 | 0.60 | 51.0 | 3.76e-01 | 100.0% | 35.2% |
| 3637892 | 2007.9.1.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › PF29907 | 0.60 | 50.0 | 3.69e-01 | 100.0% | 33.1% |
| 4437422 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.60 | 51.0 | 3.95e-01 | 98.3% | 87.9% |
| 4486944 | 7565.1.1.0 ↗ | a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like | 0.59 | 44.0 | 3.23e-01 | 100.0% | 27.2% |
| 4323699 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 49.0 | 3.40e-01 | 100.0% | 87.4% |
| 5025537 | 7550.1.1.1 ↗ | a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase | 0.57 | 49.0 | 3.89e-01 | 100.0% | 50.0% |
| 3988172 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.57 | 47.0 | 3.77e-01 | 100.0% | 60.0% |
| 3289610 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.57 | 47.0 | 2.98e-01 | 96.6% | 37.4% |
| 3945390 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.56 | 45.0 | 3.65e-01 | 100.0% | 42.2% |
| 3889943 | 7516.1.1.115 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Exostosin_GT47 | 0.56 | 46.0 | 3.24e-01 | 94.9% | 45.9% |
| 5078513 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.56 | 48.0 | 3.03e-01 | 96.6% | 99.7% |
| 3596119 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.56 | 47.0 | 3.09e-01 | 100.0% | 70.2% |
| 5004719 | 7575.1.1.9 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › CHAT | 0.56 | 47.0 | 3.35e-01 | 100.0% | 77.9% |
| 4397552 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.55 | 36.0 | 2.96e-01 | 91.5% | 32.0% |
| 3693394 | 2004.1.1.598 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF29907 | 0.55 | 43.0 | 3.11e-01 | 88.1% | 90.6% |
| 5056382 | 232.1.1.0 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein | 0.55 | 41.0 | 2.59e-01 | 83.1% | 37.8% |
| None | — | 0.54 | 43.0 | 3.17e-01 | 89.8% | 52.4% | |
| 4941784 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 40.0 | 3.21e-01 | 86.4% | 55.6% |
| 4586635 | 2004.1.1.106 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RapZ-like_N | 0.53 | 45.0 | 3.35e-01 | 100.0% | 75.3% |
| 4933408 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.53 | 45.0 | 2.87e-01 | 100.0% | 73.7% |
| 4507117 | 7581.1.1.10 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › SpoVAD | 0.53 | 45.0 | 3.43e-01 | 100.0% | 79.3% |
| 5030088 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.52 | 42.0 | 3.06e-01 | 100.0% | 84.2% |
| 4930872 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.52 | 41.0 | 3.27e-01 | 93.2% | 60.7% |
| 3786221 | 2007.1.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › Asp_Glu_race | 0.52 | 42.0 | 3.57e-01 | 100.0% | 61.7% |
| 4996429 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.52 | 45.0 | 3.20e-01 | 100.0% | 38.9% |
| 4999443 | 7516.1.1.38 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › RGP | 0.51 | 43.0 | 2.69e-01 | 100.0% | 26.9% |
| 2756424 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.51 | 45.0 | 3.32e-01 | 100.0% | 39.2% |
| 2073780 | 2007.1.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › Asp_Glu_race | 0.51 | 43.0 | 3.44e-01 | 100.0% | 66.4% |
| 2600705 | 7523.1.1.28 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_8 | 0.50 | 42.0 | 3.46e-01 | 98.3% | 65.3% |