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MG214783.2__ATS92149.1__HMSP1_8__00008
Bact-VirMG214783.2__ATS92149.1__HMSP1_8__00008
Identity
- Accession:
- MG214783 ↗
- Kingdom:
- phage
Quality
66.3
mean pLDDT
Taxonomy
TaxID: 2049306
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-49
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3j7aV00 | 2.40.50.1000 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 48.0 | 3.49e-01 | 81.2% | 42.5% |
| 2i9dA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.65 | 45.0 | 2.90e-01 | 72.9% | 81.2% |
| 5aj3Q00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 46.0 | 3.67e-01 | 81.2% | 56.9% |
| 4cbgD02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 41.0 | 2.89e-01 | 79.2% | 20.5% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.58 | 48.0 | 3.04e-01 | 93.8% | 19.2% |
| 7w3rB01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 42.0 | 2.71e-01 | 93.8% | 39.8% |
| 2wdqA04 | 4.10.80.40 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain | 0.55 | 34.0 | 3.62e-01 | 93.8% | 73.2% |
| 6eudA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.10e-01 | 95.8% | 27.6% |
| 2bw2A01 | 3.10.20.420 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain | 0.53 | 44.0 | 4.28e-01 | 100.0% | 83.6% |
| 2fdoA00 | 3.30.1970.10 | Alpha Beta › 2-Layer Sandwich › AF2331-like fold › AF2331-like | 0.52 | 38.0 | 3.16e-01 | 81.2% | 91.4% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.51 | 40.0 | 3.72e-01 | 100.0% | 78.3% |
| 1jhnA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 36.0 | 2.34e-01 | 72.9% | 23.3% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3923319 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.75 | 51.0 | 3.26e-01 | 77.1% | 14.9% |
| 5067682 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 54.0 | 4.40e-01 | 79.2% | 66.7% |
| 3880867 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.68 | 46.0 | 2.67e-01 | 72.9% | 8.5% |
| 4947171 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.67 | 45.0 | 3.62e-01 | 70.8% | 56.2% |
| 3226983 | 207.1.1.146 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4, LRR_6, LRR_9 | 0.65 | 46.0 | 2.79e-01 | 77.1% | 21.2% |
| 3590878 | 7569.1.1.1 ↗ | a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG | 0.65 | 43.0 | 2.78e-01 | 91.7% | 15.7% |
| 3784212 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 39.0 | 3.01e-01 | 91.7% | 26.7% |
| 3512025 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.61 | 41.0 | 3.35e-01 | 70.8% | 69.5% |
| 3675509 | 192.3.1.0 ↗ | alpha bundles › Long alpha-hairpin › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0.61 | 44.0 | 3.12e-01 | 77.1% | 51.7% |
| 3385857 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 44.0 | 3.70e-01 | 81.2% | 81.1% |
| 3940677 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.59 | 44.0 | 2.99e-01 | 83.3% | 39.5% |
| 3930569 | 384.1.1.8 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › BPTI_nem | 0.59 | 42.0 | 3.53e-01 | 100.0% | 42.2% |
| 3632975 | 3447.1.1.1 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › ERG4_ERG24 | 0.59 | 41.0 | 2.69e-01 | 91.7% | 15.7% |
| 3305241 | 2003.1.5.153 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT, Methyltransf_25 | 0.59 | 42.0 | 2.86e-01 | 75.0% | 76.1% |
| 4978537 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.59 | 34.0 | 2.55e-01 | 93.8% | 20.8% |
| 3703529 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 50.0 | 3.14e-01 | 95.8% | 22.6% |
| 3441614 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.58 | 40.0 | 2.77e-01 | 75.0% | 76.8% |
| 4238837 | 376.1.2.6 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PET | 0.58 | 36.0 | 3.26e-01 | 77.1% | 43.3% |
| 4309308 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.57 | 45.0 | 3.93e-01 | 91.7% | 61.3% |
| 3797474 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.57 | 46.0 | 4.02e-01 | 100.0% | 63.5% |
| 3217805 | 386.1.1.366 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › BPTI_nem | 0.56 | 40.0 | 3.49e-01 | 100.0% | 47.5% |
| 3303752 | 12.1.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C | 0.56 | 36.0 | 2.99e-01 | 93.8% | 35.6% |
| 3946649 | 57.1.1.2 ↗ | beta complex topology › Cloacin translocation domain › Cloacin translocation domain › Cloacin translocation domain › Pyocin_S | 0.55 | 46.0 | 3.51e-01 | 97.9% | 68.0% |
| 3667392 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.55 | 40.0 | 3.23e-01 | 85.4% | 75.7% |
| 3792300 | 7579.1.1.23 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PAF-AH_p_II | 0.55 | 41.0 | 2.50e-01 | 89.6% | 51.5% |
| 5040519 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 45.0 | 2.85e-01 | 93.8% | 30.8% |
| 5047069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 41.0 | 2.74e-01 | 87.5% | 18.7% |
| None | — | 0.54 | 41.0 | 2.48e-01 | 89.6% | 51.3% | |
| 3939245 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 40.0 | 2.40e-01 | 93.8% | 11.0% |
| 3656807 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 44.0 | 3.55e-01 | 91.7% | 54.4% |
| 3414928 | 382.1.1.6 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR | 0.53 | 44.0 | 3.70e-01 | 97.9% | 63.6% |
| 4978512 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.53 | 42.0 | 2.72e-01 | 89.6% | 35.6% |
| 3599185 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 43.0 | 3.48e-01 | 100.0% | 74.3% |
| 3930805 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 42.0 | 3.62e-01 | 97.9% | 100.0% |
| 3175336 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 33.0 | 2.94e-01 | 70.8% | 41.3% |
| 3597248 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 41.0 | 3.29e-01 | 89.6% | 58.9% |
| 3289119 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 37.0 | 2.26e-01 | 85.4% | 78.2% |
| 3216660 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.50 | 40.0 | 2.59e-01 | 95.8% | 45.4% |