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MG250483.1__AUE22546.1__Ah1_00005__00005
Bact-VirMG250483.1__AUE22546.1__Ah1_00005__00005
Identity
- Accession:
- MG250483 ↗
- Kingdom:
- phage
Quality
89.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Cinqassovirus›
Aeromonas_phage_Ah1
TaxID: 2053701
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-110_168-186
Domain cluster:
rep: term2_saliva_scaffold_1_prodigal-single.1__X__X__00117__D395-534_709-736
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01751.29 best | Toprim | 35.3 | 1.40e-08 | 85.9% | 97.9% |
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xcqA01 | 3.40.50.670 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.83 | 72.0 | 6.19e-01 | 90.6% | 89.4% |
| 1t6t200 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.80 | 49.0 | 5.30e-01 | 87.5% | 71.8% |
| 1vddA03 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.72 | 48.0 | 5.60e-01 | 84.4% | 94.6% |
| 4cgyA01 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.70 | 60.0 | 5.29e-01 | 89.1% | 90.9% |
| 5gvcB01 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 57.0 | 5.19e-01 | 89.1% | 97.5% |
| 5gujA02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.65 | 51.0 | 5.24e-01 | 88.3% | 84.0% |
| 5uj1A01 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 59.0 | 5.61e-01 | 99.2% | 98.6% |
| 1vi6C01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.62 | 41.0 | 3.59e-01 | 89.8% | 45.2% |
| 1dz3A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 44.0 | 4.52e-01 | 91.4% | 77.2% |
| 7zp2C02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.61 | 37.0 | 3.46e-01 | 72.7% | 48.1% |
| 2qtfA01 | 3.40.50.11060 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTPase HflX, N-terminal domain | 0.61 | 41.0 | 4.59e-01 | 88.3% | 90.7% |
| 3uhjC01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 46.0 | 4.41e-01 | 100.0% | 67.8% |
| 2q5cA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 40.0 | 4.56e-01 | 88.3% | 89.7% |
| 2q9uA02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.60 | 48.0 | 4.62e-01 | 91.4% | 74.5% |
| 3mfqA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.58 | 36.0 | 3.50e-01 | 87.5% | 54.6% |
| 1ujnA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 47.0 | 4.35e-01 | 100.0% | 68.9% |
| 1lhpA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 47.0 | 3.53e-01 | 89.8% | 45.1% |
| 1iuqA02 | 3.40.1130.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase | 0.56 | 50.0 | 3.95e-01 | 100.0% | 58.1% |
| 2i3cA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.56 | 51.0 | 4.05e-01 | 100.0% | 90.2% |
| 3qyfA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.55 | 48.0 | 4.47e-01 | 97.7% | 95.8% |
| 3n53A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 41.0 | 4.33e-01 | 88.3% | 88.0% |
| 3mebA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 38.0 | 2.96e-01 | 92.2% | 32.8% |
| 2afcA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.54 | 43.0 | 4.06e-01 | 85.9% | 88.2% |
| 7u35A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 36.0 | 4.13e-01 | 86.7% | 98.9% |
| 4zdoB00 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 43.0 | 2.98e-01 | 89.8% | 29.7% |
| 7p0jA01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.52 | 35.0 | 4.08e-01 | 99.2% | 98.9% |
| 3dmyA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 34.0 | 3.32e-01 | 85.2% | 58.7% |
| 4u63A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 42.0 | 3.77e-01 | 85.9% | 69.5% |
| 3f9iA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 44.0 | 3.74e-01 | 94.5% | 64.1% |
| 1pq4A01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.51 | 42.0 | 4.00e-01 | 88.3% | 77.0% |
| 3k7yA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 41.0 | 3.28e-01 | 92.2% | 41.7% |
| 4nzpA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 41.0 | 4.05e-01 | 87.5% | 84.1% |
| 4rshA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 42.0 | 3.87e-01 | 92.2% | 70.9% |
| 1di0A00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.50 | 42.0 | 4.01e-01 | 89.8% | 90.5% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4878011 | 2006.1.3.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOPRIM_C | 0.96 | 93.0 | 7.57e-01 | 100.0% | 85.4% |
| 3964707 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.95 | 93.0 | 7.31e-01 | 100.0% | 85.2% |
| 4124102 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.95 | 92.0 | 7.20e-01 | 100.0% | 82.1% |
| 4406660 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.95 | 92.0 | 7.18e-01 | 100.0% | 80.0% |
| None | — | 0.95 | 92.0 | 7.17e-01 | 100.0% | 79.9% | |
| None | — | 0.95 | 91.0 | 7.18e-01 | 100.0% | 84.3% | |
| 4238497 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.94 | 91.0 | 7.22e-01 | 100.0% | 83.5% |
| 3520955 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.94 | 91.0 | 6.87e-01 | 100.0% | 73.2% |
| 3164150 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.94 | 91.0 | 7.23e-01 | 100.0% | 87.1% |
| 3594652 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.94 | 90.0 | 6.75e-01 | 100.0% | 71.6% |
| 3789608 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.93 | 90.0 | 6.73e-01 | 100.0% | 71.6% |
| 3213306 | 2006.1.3.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOPRIM_C | 0.93 | 90.0 | 6.77e-01 | 100.0% | 73.0% |
| 4945733 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.93 | 90.0 | 6.93e-01 | 100.0% | 82.0% |
| 4100838 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.93 | 90.0 | 7.18e-01 | 100.0% | 82.6% |
| 1165402 | 2006.1.3.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim,TOPRIM_C | 0.93 | 77.0 | 7.39e-01 | 85.9% | 82.6% |
| 1878568 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.93 | 77.0 | 7.61e-01 | 85.9% | 82.8% |
| None | — | 0.92 | 77.0 | 6.65e-01 | 85.9% | 63.9% | |
| 3551383 | 2006.1.3.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim,TOPRIM_C | 0.92 | 88.0 | 6.49e-01 | 100.0% | 67.9% |
| 2452014 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.92 | 88.0 | 6.89e-01 | 100.0% | 82.8% |
| 2048141 | 2007.1.14.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › ZnuA | 0.69 | 43.0 | 4.95e-01 | 85.9% | 84.9% |
| 4283078 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.69 | 59.0 | 5.51e-01 | 89.8% | 96.8% |
| 4392313 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.69 | 58.0 | 5.44e-01 | 89.1% | 96.8% |
| 4418350 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.68 | 59.0 | 5.01e-01 | 89.8% | 96.9% |
| 3701405 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.67 | 45.0 | 5.27e-01 | 93.8% | 97.8% |
| 3985306 | 2007.1.3.43 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PF30453 | 0.62 | 39.0 | 4.11e-01 | 91.4% | 69.6% |
| 4880710 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.61 | 57.0 | 4.96e-01 | 100.0% | 93.7% |
| 5010939 | 2007.1.7.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH | 0.59 | 44.0 | 4.30e-01 | 100.0% | 71.4% |
| 3995461 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.58 | 50.0 | 4.46e-01 | 93.8% | 85.6% |
| 4952943 | 7595.1.1.0 ↗ | a/b three-layered sandwiches › B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit | 0.58 | 45.0 | 4.70e-01 | 89.8% | 88.3% |
| 4019825 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.56 | 46.0 | 4.58e-01 | 89.1% | 96.3% |
| 3601565 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.55 | 43.0 | 4.45e-01 | 89.8% | 90.0% |
| 5051068 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.55 | 45.0 | 4.10e-01 | 89.8% | 79.4% |
| 3640768 | 129.1.1.54 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD-bd_HRPKS_sdrA | 0.55 | 45.0 | 3.96e-01 | 91.4% | 79.5% |
| 4460501 | 7510.1.1.3 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › FA_synthesis | 0.54 | 44.0 | 4.22e-01 | 88.3% | 88.2% |
| 4029086 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.54 | 48.0 | 3.12e-01 | 99.2% | 28.9% |
| 5012276 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.54 | 46.0 | 4.42e-01 | 93.8% | 98.6% |
| 4958578 | 2007.1.14.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like | 0.53 | 44.0 | 4.34e-01 | 88.3% | 91.1% |
| 5061889 | 2005.1.1.123 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Hydant_A_N | 0.52 | 42.0 | 4.19e-01 | 87.5% | 97.8% |
| 3558981 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.52 | 43.0 | 3.86e-01 | 90.6% | 82.8% |
| 4966181 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.52 | 37.0 | 3.33e-01 | 75.0% | 75.4% |
| 4016213 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.50 | 40.0 | 3.11e-01 | 87.5% | 68.2% |
| 3297908 | 300.1.1.16 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 | 0.50 | 38.0 | 3.23e-01 | 81.2% | 65.9% |