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MG251388.1__ATW62285.1__Psp6_00032__00032

Bact-Vir

MG251388.1__ATW62285.1__Psp6_00032__00032

Identity

Accession:
MG251388 ↗
Kingdom:
phage

Quality

84.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_Psp6

TaxID: 2053693

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-52
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6pw7A02 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.65 40.0 3.66e-01 76.9% 46.5%
2cqnA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.62 47.0 4.27e-01 88.5% 61.0%
2eucA00 1.10.8.570 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Hypothetical protein YfmB 0.57 41.0 3.26e-01 76.9% 77.6%
2ctoA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.56 41.0 3.94e-01 78.8% 100.0%
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.55 44.0 3.05e-01 96.2% 52.4%
2vxdA00 1.10.10.2100 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain 0.53 37.0 3.69e-01 88.5% 74.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4451518 101.1.1.80 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PRC2_HTH_1 0.56 41.0 3.81e-01 82.7% 72.9%
5070979 4244.1.1.0 ↗ a/b three-layered sandwiches › EreA/ChaN-like › EreA/ChaN-like › EreA/ChaN-like 0.55 47.0 3.21e-01 100.0% 73.7%
4013698 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 43.0 4.08e-01 92.3% 100.0%
D2 medium residues 53-113
PDB
Domain cluster: representative