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MG252615.1__AUE23497.1__HSE2_gp027__00026

Bact-Vir

MG252615.1__AUE23497.1__HSE2_gp027__00026

Identity

Accession:
MG252615 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sarkviridae› Kagunavirus› Escherichia_phage_vB_EcoS_HSE2

TaxID: 2053690

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 25-74
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4yfbC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.69 47.0 4.04e-01 72.0% 57.7%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 53.0 4.40e-01 90.0% 56.7%
3cetB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 43.0 3.45e-01 72.0% 67.3%
1fm2B03 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.64 47.0 4.26e-01 78.0% 69.7%
3u7zA00 2.170.130.30 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › 0.64 46.0 3.79e-01 80.0% 54.6%
3tcaA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 43.0 3.70e-01 78.0% 42.2%
5xd7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 46.0 3.54e-01 84.0% 48.0%
6ixyA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 38.0 2.82e-01 76.0% 22.8%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 38.0 2.87e-01 70.0% 25.0%
3vpyA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.62 46.0 3.47e-01 86.0% 70.3%
2wyqA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 44.0 3.84e-01 78.0% 55.8%
4egwA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.61 46.0 3.57e-01 94.0% 34.4%
6nvxB02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.60 45.0 3.91e-01 80.0% 59.7%
2byvE05 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 41.0 3.71e-01 80.0% 49.4%
7sxqA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 45.0 2.96e-01 88.0% 47.6%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 46.0 3.63e-01 88.0% 73.0%
4hstB02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.58 41.0 3.82e-01 76.0% 58.8%
2fh5B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 39.0 2.66e-01 70.0% 53.7%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 44.0 3.62e-01 86.0% 50.0%
2pmqA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 46.0 3.58e-01 96.0% 59.7%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 46.0 3.72e-01 92.0% 70.2%
2og9A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 41.0 3.18e-01 80.0% 43.8%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.58 39.0 2.66e-01 70.0% 84.2%
2k5qA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.57 43.0 3.55e-01 90.0% 56.2%
4gs5A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.56 46.0 3.76e-01 98.0% 81.0%
3j7aZ00 3.30.1230.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 0.56 45.0 4.14e-01 98.0% 70.8%
1ilvA00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.56 38.0 2.45e-01 72.0% 31.0%
3wa5B00 2.60.120.1690 Mainly Beta › Sandwich › Jelly Rolls › 0.56 43.0 3.41e-01 94.0% 39.5%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 44.0 3.09e-01 88.0% 43.6%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 37.0 2.50e-01 72.0% 33.0%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.55 38.0 3.36e-01 94.0% 46.3%
2hn1A01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.55 43.0 3.27e-01 96.0% 32.4%
1gcbA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.55 36.0 2.14e-01 82.0% 8.5%
4bgjA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 42.0 3.43e-01 96.0% 78.8%
3ci0I00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.54 43.0 3.76e-01 92.0% 55.4%
1sr9A02 3.30.160.270 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain 0.54 43.0 3.11e-01 96.0% 45.7%
1yeyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 41.0 3.31e-01 96.0% 73.4%
4l1nA00 2.40.128.660 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF15525, DUF4652 0.53 37.0 2.67e-01 76.0% 24.2%
3a0rA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 35.0 2.88e-01 70.0% 50.0%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 41.0 2.87e-01 98.0% 22.3%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 40.0 3.71e-01 98.0% 70.3%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.52 40.0 3.00e-01 96.0% 79.5%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 44.0 2.75e-01 100.0% 37.7%
5ekaA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.52 34.0 2.99e-01 70.0% 43.5%
2k5wA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.51 40.0 3.24e-01 94.0% 56.8%
5ek8A01 2.60.40.3330 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 36.0 2.75e-01 74.0% 73.8%
6a95B00 2.30.130.120 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › 0.51 34.0 3.31e-01 78.0% 60.7%
4eg9A00 2.50.20.40 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.51 36.0 2.40e-01 76.0% 84.8%
6tdxG01 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.51 38.0 2.64e-01 88.0% 80.4%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.51 40.0 3.93e-01 94.0% 89.3%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 36.0 3.40e-01 80.0% 60.0%
3volA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 33.0 2.59e-01 70.0% 25.4%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.50 40.0 3.52e-01 96.0% 57.1%
3by8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 33.0 2.57e-01 70.0% 34.6%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4059788 387.1.1.24 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › Toxin_35 0.75 53.0 4.91e-01 76.0% 61.5%
4449325 387.1.1.24 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › Toxin_35 0.74 51.0 5.33e-01 72.0% 82.2%
3975705 3115.6.1.0 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon 0.72 53.0 5.35e-01 80.0% 80.0%
4007508 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.71 53.0 5.38e-01 86.0% 80.0%
3413652 379.1.1.0 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.67 47.0 4.44e-01 74.0% 65.0%
3257563 101.1.1.76 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.67 49.0 4.08e-01 82.0% 71.6%
3479321 5001.1.1.41 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw 0.67 48.0 2.84e-01 76.0% 26.0%
3744517 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.66 56.0 4.28e-01 98.0% 72.5%
3257603 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.64 55.0 4.21e-01 100.0% 59.2%
5078190 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.63 52.0 3.36e-01 98.0% 24.2%
3244742 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.63 47.0 2.97e-01 84.0% 15.9%
3934826 207.1.1.45 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4,LRR_8 0.62 47.0 2.83e-01 82.0% 25.0%
3454119 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.62 51.0 3.82e-01 100.0% 83.4%
3592269 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 47.0 3.52e-01 88.0% 31.9%
4411025 284.1.3.3 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › DUF4346 0.61 46.0 4.14e-01 98.0% 55.0%
3278704 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.61 47.0 4.17e-01 100.0% 55.0%
3517917 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.61 48.0 4.55e-01 94.0% 96.9%
3274094 223.2.1.6 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.60 50.0 3.64e-01 100.0% 46.5%
4622312 2003.1.2.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.60 40.0 2.34e-01 70.0% 23.7%
2035523 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.60 44.0 3.48e-01 82.0% 58.9%
5002490 2004.1.1.308 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.59 42.0 2.53e-01 82.0% 9.7%
3351840 284.1.3.2 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.59 46.0 4.22e-01 98.0% 65.2%
3517620 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.59 41.0 2.58e-01 76.0% 30.6%
4034091 4325.1.1.7 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 0.58 45.0 4.54e-01 90.0% 90.0%
5004462 3454.1.1.0 ↗ beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like 0.58 44.0 3.77e-01 94.0% 48.9%
3636403 4001.1.1.4 ↗ a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB 0.58 46.0 3.42e-01 88.0% 76.2%
3957641 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.58 44.0 4.34e-01 86.0% 85.5%
3274239 330.1.1.18 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 0.58 45.0 3.70e-01 98.0% 68.7%
5053339 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 47.0 3.74e-01 100.0% 57.4%
3206409 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.57 47.0 3.35e-01 94.0% 34.4%
4964699 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.57 42.0 3.42e-01 84.0% 41.0%
4930437 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.56 42.0 3.36e-01 86.0% 39.0%
3708741 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 42.0 2.56e-01 82.0% 69.2%
3709549 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.56 46.0 3.22e-01 92.0% 87.9%
3972135 205.1.1.71 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7, Fer4_11 0.56 46.0 3.24e-01 98.0% 80.0%
3834577 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 45.0 3.47e-01 96.0% 76.9%
4682079 4.6.1.6 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.55 41.0 3.58e-01 86.0% 65.9%
5027780 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.55 45.0 4.33e-01 100.0% 88.3%
3541127 2.1.1.170 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SHLD2_OB2 0.55 39.0 3.54e-01 84.0% 53.3%
5004264 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.54 42.0 3.34e-01 94.0% 38.2%
3215667 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.53 43.0 3.44e-01 100.0% 70.0%
3279044 2.1.1.314 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27099 0.53 43.0 4.04e-01 96.0% 81.5%
3183690 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 42.0 3.08e-01 88.0% 81.3%
4097524 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 38.0 3.44e-01 76.0% 98.6%
4595166 5076.2.1.0 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ 0.53 44.0 2.99e-01 100.0% 40.9%
5046521 3326.1.1.1 ↗ alpha arrays › DNA-binding domain in UvrA › DNA-binding domain in UvrA › DNA-binding domain in UvrA › UvrA_DNA-bind 0.53 38.0 2.96e-01 80.0% 38.3%
4943626 330.2.1.0 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.53 42.0 3.38e-01 98.0% 45.0%
3678038 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.53 44.0 3.89e-01 96.0% 74.7%
4951717 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.52 37.0 3.33e-01 78.0% 85.3%
3592578 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 42.0 2.61e-01 100.0% 30.4%
3194847 3343.1.1.2 ↗ alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal 0.52 44.0 2.47e-01 96.0% 44.7%
3698019 11.8.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.52 44.0 3.17e-01 94.0% 44.8%
3743107 227.1.1.11 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.50 36.0 2.71e-01 78.0% 73.6%
3798928 59.1.4.2 ↗ beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › DUF3591 0.50 40.0 2.35e-01 92.0% 67.3%
3475901 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.50 39.0 3.36e-01 92.0% 84.4%
3839607 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.50 41.0 3.28e-01 100.0% 68.6%
5053329 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 40.0 3.23e-01 100.0% 85.8%