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MG271909.1__ATS93202.1__SLBS1_A30__00030
Bact-VirMG271909.1__ATS93202.1__SLBS1_A30__00030
Identity
- Accession:
- MG271909 ↗
- Kingdom:
- phage
Quality
80.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 66-216
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00959.25 best | Phage_lysozyme | 88.9 | 4.70e-25 | 80.8% | 82.4% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2anvA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.81 | 72.0 | 7.40e-01 | 100.0% | 97.3% |
| 3hdeC00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 74.0 | 7.20e-01 | 100.0% | 88.4% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 72.0 | 7.29e-01 | 100.0% | 95.9% |
| 8b2sA01 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.78 | 72.0 | 7.22e-01 | 98.7% | 94.8% |
| 8hp8A01 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.76 | 67.0 | 6.70e-01 | 98.7% | 91.5% |
| 4aqnA02 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.74 | 69.0 | 6.32e-01 | 100.0% | 96.9% |
| 4evxA00 | 1.10.1740.240 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.68 | 42.0 | 5.21e-01 | 91.4% | 96.9% |
| 152lA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.67 | 61.0 | 6.00e-01 | 98.7% | 95.1% |
| 1xjuA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.66 | 62.0 | 6.16e-01 | 100.0% | 95.5% |
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.66 | 61.0 | 5.68e-01 | 98.7% | 81.4% |
| 1zu4A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.60 | 27.0 | 3.41e-01 | 83.4% | 70.1% |
| 1e9rA02 | 1.10.8.80 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain | 0.50 | 30.0 | 3.35e-01 | 80.8% | 76.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 136932 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.81 | 75.0 | 7.25e-01 | 100.0% | 87.9% |
| 159686 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.81 | 72.0 | 7.40e-01 | 100.0% | 97.3% |
| 2488339 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.80 | 72.0 | 7.29e-01 | 100.0% | 95.9% |
| 4019669 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.78 | 73.0 | 7.23e-01 | 100.0% | 95.5% |
| 7422 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.66 | 62.0 | 6.16e-01 | 100.0% | 95.5% |
| 3224257 | 3352.1.1.4 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Alg6_Alg8 | 0.60 | 54.0 | 3.84e-01 | 100.0% | 83.1% |
| 3244615 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.54 | 41.0 | 3.36e-01 | 79.5% | 80.7% |
| 3699890 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.53 | 36.0 | 3.84e-01 | 82.8% | 77.0% |
| 3367300 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.53 | 37.0 | 3.68e-01 | 100.0% | 68.1% |
| 3223628 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.51 | 39.0 | 3.19e-01 | 78.8% | 76.2% |
D2
high
residues 239-367
Domain cluster:
rep: SR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00274__D10-149
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08291.17 best | Peptidase_M15_3 | 60.9 | 1.70e-16 | 87.6% | 93.5% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lbuA02 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.82 | 76.0 | 7.61e-01 | 96.9% | 96.1% |
| 5hnmC00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.66 | 58.0 | 5.17e-01 | 93.8% | 84.8% |
| 4mphA00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.65 | 59.0 | 5.27e-01 | 99.2% | 81.8% |
| 2iusD01 | 3.30.980.40 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.65 | 43.0 | 4.83e-01 | 77.5% | 88.8% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 37.0 | 4.59e-01 | 85.3% | 94.7% |
| 1eluA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 37.0 | 3.93e-01 | 78.3% | 65.2% |
| 2zzeA04 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.62 | 43.0 | 4.87e-01 | 79.8% | 96.8% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.60 | 35.0 | 4.02e-01 | 79.1% | 77.1% |
| 1vknA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 43.0 | 3.94e-01 | 72.9% | 100.0% |
| 2p2sA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 38.0 | 3.27e-01 | 82.9% | 41.8% |
| 3w1hA01 | 3.90.1150.110 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.59 | 40.0 | 3.54e-01 | 79.8% | 47.1% |
| 2x5fA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 35.0 | 3.83e-01 | 79.1% | 72.1% |
| 1m32A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 37.0 | 3.91e-01 | 79.8% | 72.1% |
| 4zrlA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.57 | 44.0 | 4.64e-01 | 83.7% | 90.6% |
| 4kp4A02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 45.0 | 4.38e-01 | 91.5% | 89.2% |
| 1q9uA00 | 3.30.310.70 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TT1751-like domain | 0.54 | 37.0 | 3.72e-01 | 79.8% | 69.5% |
| 4bixB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.53 | 45.0 | 4.33e-01 | 91.5% | 87.8% |
| 3tz6A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 44.0 | 3.85e-01 | 91.5% | 100.0% |
| 2yv3A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 44.0 | 3.89e-01 | 91.5% | 100.0% |
| 2pb9A00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.52 | 40.0 | 3.62e-01 | 82.2% | 95.7% |
| 2vt8A00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.52 | 37.0 | 3.62e-01 | 98.4% | 66.4% |
| 4r3nA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 44.0 | 3.80e-01 | 92.2% | 100.0% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 32.0 | 3.24e-01 | 83.7% | 60.3% |
| 3sxxC01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 32.0 | 3.56e-01 | 85.3% | 81.4% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018092 | 307.1.1.5 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15_3 | 0.88 | 75.0 | 6.50e-01 | 100.0% | 62.2% |
| 5588 | 307.1.1.5 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15_3 | 0.83 | 76.0 | 7.65e-01 | 97.7% | 96.2% |
| 3285027 | 307.1.1.5 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15_3 | 0.80 | 71.0 | 6.43e-01 | 100.0% | 71.8% |
| 5081052 | 307.1.1.5 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15_3 | 0.80 | 75.0 | 7.18e-01 | 100.0% | 100.0% |
| 3942276 | 307.1.1.8 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15_2 | 0.77 | 72.0 | 6.89e-01 | 97.7% | 99.3% |
| 4253075 | 304.156.1.1 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › FtsK_alpha | 0.66 | 44.0 | 4.93e-01 | 76.7% | 88.0% |
| 3941794 | 298.1.1.5 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Semialdhyde_dhC | 0.64 | 45.0 | 4.01e-01 | 72.1% | 100.0% |
| 4360595 | 304.156.1.1 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › FtsK_alpha | 0.64 | 43.0 | 4.65e-01 | 77.5% | 80.0% |
| 4400002 | 298.1.1.5 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Semialdhyde_dhC | 0.63 | 46.0 | 3.99e-01 | 75.2% | 97.9% |
| 1151720 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.63 | 37.0 | 4.25e-01 | 78.3% | 79.8% |
| 4997324 | 298.1.1.7 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Gp_dh_C | 0.63 | 46.0 | 4.23e-01 | 76.0% | 100.0% |
| 5039253 | 298.1.1.7 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Gp_dh_C | 0.63 | 46.0 | 4.18e-01 | 76.0% | 99.4% |
| 4478921 | 304.156.1.1 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › FtsK_alpha | 0.62 | 41.0 | 4.84e-01 | 74.4% | 100.0% |
| 5066702 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.62 | 37.0 | 4.56e-01 | 94.6% | 100.0% |
| 3603805 | 298.1.1.7 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Gp_dh_C | 0.62 | 45.0 | 4.13e-01 | 76.0% | 99.4% |
| 4074443 | 304.156.1.1 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › FtsK_alpha | 0.62 | 49.0 | 5.22e-01 | 89.9% | 98.2% |
| 3960213 | 304.156.1.5 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › PF31086 | 0.60 | 46.0 | 4.85e-01 | 80.6% | 97.4% |
| 3953238 | 3513.1.1.2 ↗ | a+b two layers › Putative lipoprotein LppA › Putative lipoprotein LppA › Putative lipoprotein LppA › LppA | 0.59 | 44.0 | 4.19e-01 | 77.5% | 81.3% |
| 4964302 | 309.1.2.1 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD | 0.58 | 46.0 | 4.26e-01 | 82.9% | 98.1% |
| 5052498 | 309.1.2.1 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD | 0.58 | 42.0 | 4.04e-01 | 75.2% | 100.0% |
| 5036578 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.57 | 39.0 | 4.49e-01 | 76.7% | 100.0% |
| 4990838 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.56 | 36.0 | 3.82e-01 | 92.2% | 73.6% |
| 4962505 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.55 | 46.0 | 4.40e-01 | 92.2% | 85.2% |
| 5045433 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.55 | 37.0 | 3.89e-01 | 92.2% | 76.5% |
| 4932559 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.54 | 37.0 | 3.95e-01 | 92.2% | 81.8% |
| 1383100 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.54 | 36.0 | 3.85e-01 | 79.1% | 78.1% |
| 5046058 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.53 | 44.0 | 4.39e-01 | 91.5% | 91.1% |
| 4317011 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.52 | 43.0 | 4.12e-01 | 92.2% | 85.8% |
| 4028481 | 811.1.1.1 ↗ | a+b complex topology › Cell cycle regulatory proteins › Cell cycle regulatory proteins › Cell cycle regulatory proteins › CKS | 0.50 | 32.0 | 3.75e-01 | 90.7% | 92.2% |
| 4982212 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.50 | 34.0 | 3.53e-01 | 83.7% | 74.2% |
D3
medium
residues 9-56
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ahuH01 | 3.30.70.3250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribonuclease P, Pop5 subunit | 0.76 | 47.0 | 3.76e-01 | 72.9% | 31.6% |
| 3c2bA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 51.0 | 4.99e-01 | 72.9% | 73.1% |
| 3swxA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.73 | 49.0 | 4.64e-01 | 72.9% | 58.6% |
| 3bz6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 50.0 | 4.10e-01 | 81.2% | 60.0% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.64 | 56.0 | 4.84e-01 | 100.0% | 75.0% |
| 4oa3A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.61 | 52.0 | 3.78e-01 | 100.0% | 62.4% |
| 1gveB00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.60 | 48.0 | 2.98e-01 | 91.7% | 28.6% |
| 3g7kB02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.60 | 43.0 | 3.01e-01 | 79.2% | 59.7% |
| 4muqA02 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.60 | 48.0 | 3.40e-01 | 87.5% | 56.2% |
| 2kd1A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.60 | 42.0 | 3.26e-01 | 77.1% | 31.4% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.58 | 49.0 | 3.71e-01 | 100.0% | 51.6% |
| 2l4eA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.57 | 38.0 | 3.64e-01 | 77.1% | 57.9% |
| 4i1mB01 | 1.20.120.1700 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 48.0 | 3.59e-01 | 100.0% | 85.3% |
| 5jc3A02 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.56 | 48.0 | 3.62e-01 | 100.0% | 66.7% |
| 1dysA00 | 3.20.20.40 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase | 0.55 | 38.0 | 2.34e-01 | 75.0% | 95.7% |
| 1h72C02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.53 | 42.0 | 3.08e-01 | 89.6% | 31.1% |
| 6wnta01 | 6.10.20.140 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › 50S ribosomal protein L1; Chain A, Domain 1 | 0.50 | 33.0 | 3.10e-01 | 83.3% | 52.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5082707 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.73 | 65.0 | 3.93e-01 | 97.9% | 53.8% |
| 3283044 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.73 | 49.0 | 4.35e-01 | 70.8% | 55.7% |
| 3955949 | 7565.1.1.1 ↗ | a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase | 0.72 | 54.0 | 3.73e-01 | 81.2% | 81.9% |
| 3278617 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.70 | 50.0 | 4.96e-01 | 77.1% | 76.0% |
| 4284318 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 55.0 | 4.79e-01 | 91.7% | 61.3% |
| 3685199 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.63 | 44.0 | 4.44e-01 | 75.0% | 74.0% |
| 4086723 | 316.1.1.43 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF294 | 0.62 | 45.0 | 3.16e-01 | 77.1% | 27.1% |
| 4100663 | 7575.1.1.11 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › PF31181 | 0.62 | 42.0 | 2.58e-01 | 75.0% | 10.6% |
| 3256686 | 568.1.1.0 ↗ | few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related | 0.60 | 42.0 | 4.10e-01 | 77.1% | 70.9% |
| 5052262 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 40.0 | 3.55e-01 | 77.1% | 52.0% |