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MG271909.1__ATS93218.1__SLBS1_A46__00046
Bact-VirMG271909.1__ATS93218.1__SLBS1_A46__00046
Identity
- Accession:
- MG271909 ↗
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 157-202
Domain cluster:
rep: NC_042106.1__YP_009622881.1__FDJ31_gp83__00083__D120-165
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.71 | 50.0 | 4.34e-01 | 73.9% | 94.0% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.70 | 52.0 | 3.73e-01 | 78.3% | 54.8% |
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.70 | 49.0 | 3.65e-01 | 73.9% | 56.6% |
| 2mtzA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.64 | 47.0 | 4.61e-01 | 80.4% | 88.0% |
| 5fo5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 54.0 | 4.33e-01 | 95.7% | 50.0% |
| 1wi9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 52.0 | 4.84e-01 | 95.7% | 86.2% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 50.0 | 4.13e-01 | 95.7% | 64.0% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 50.0 | 4.33e-01 | 95.7% | 69.9% |
| 5y9sC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 47.0 | 3.95e-01 | 100.0% | 50.0% |
| 1mwrA03 | 3.30.1390.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Penicillin-binding protein 2a; domain 3 | 0.58 | 49.0 | 4.26e-01 | 93.5% | 88.6% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 47.0 | 3.41e-01 | 95.7% | 37.7% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 49.0 | 3.75e-01 | 97.8% | 50.5% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 46.0 | 3.89e-01 | 95.7% | 57.1% |
| 1s6lA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 47.0 | 4.58e-01 | 95.7% | 88.5% |
| 2iw3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 41.0 | 2.73e-01 | 82.6% | 31.5% |
| 3h5tA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.56 | 49.0 | 4.92e-01 | 100.0% | 100.0% |
| 3pfiA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 3.99e-01 | 95.7% | 61.6% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.54 | 44.0 | 3.43e-01 | 95.7% | 41.3% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.82e-01 | 95.7% | 74.0% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.50 | 40.0 | 3.18e-01 | 100.0% | 77.2% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4414927 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.86 | 79.0 | 6.81e-01 | 100.0% | 71.0% |
| 3171408 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.86 | 77.0 | 7.50e-01 | 97.8% | 96.0% |
| 3587703 | 101.1.14.0 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases | 0.80 | 71.0 | 6.97e-01 | 100.0% | 94.0% |
| 3948487 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.77 | 48.0 | 3.40e-01 | 80.4% | 21.5% |
| 3942056 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.75 | 53.0 | 5.35e-01 | 73.9% | 100.0% |
| 4278221 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.73 | 52.0 | 4.61e-01 | 76.1% | 78.5% |
| 3958148 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.72 | 50.0 | 3.55e-01 | 73.9% | 40.7% |
| 4034325 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.72 | 53.0 | 3.81e-01 | 78.3% | 43.2% |
| 2876157 | 101.1.9.105 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 | 0.71 | 48.0 | 4.65e-01 | 71.7% | 100.0% |
| 3291061 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.71 | 48.0 | 3.61e-01 | 71.7% | 47.8% |
| 3268224 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.69 | 48.0 | 4.55e-01 | 73.9% | 87.3% |
| 3698670 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.69 | 54.0 | 4.92e-01 | 84.8% | 83.3% |
| 3976327 | 101.1.9.41 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › ORF6N | 0.69 | 51.0 | 5.18e-01 | 82.6% | 80.0% |
| 4158216 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.68 | 47.0 | 4.36e-01 | 73.9% | 85.0% |
| 4447894 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.67 | 52.0 | 4.86e-01 | 82.6% | 96.4% |
| 3513182 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.67 | 53.0 | 3.97e-01 | 89.1% | 99.2% |
| 3611431 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.63 | 46.0 | 4.26e-01 | 80.4% | 96.7% |
| 4310740 | 101.1.2.81 ↗ | alpha arrays › HTH › HTH › winged helix domain › Put_DNA-bind_N | 0.63 | 53.0 | 4.39e-01 | 95.7% | 53.8% |
| 3788382 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.61 | 51.0 | 4.30e-01 | 95.7% | 60.0% |
| 3587532 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.61 | 51.0 | 4.87e-01 | 95.7% | 85.5% |
| 3703451 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.61 | 51.0 | 4.11e-01 | 95.7% | 57.8% |
| 3240617 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.60 | 46.0 | 4.25e-01 | 84.8% | 86.7% |
| 3278087 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.58 | 49.0 | 3.71e-01 | 95.7% | 50.0% |
| 3165082 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.58 | 46.0 | 4.52e-01 | 89.1% | 92.0% |
| 3401504 | 108.1.1.96 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 | 0.56 | 39.0 | 2.62e-01 | 73.9% | 62.7% |
| 4344000 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.51 | 37.0 | 2.58e-01 | 82.6% | 51.4% |
D2
medium
residues 9-55
Domain cluster:
representative
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fcyB02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 69.0 | 6.28e-01 | 100.0% | 76.9% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 67.0 | 5.48e-01 | 100.0% | 51.6% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 60.0 | 5.67e-01 | 91.5% | 87.5% |
| 2c5uA02 | 1.10.3550.20 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › | 0.73 | 61.0 | 4.51e-01 | 100.0% | 35.1% |
| 2qbyA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 62.0 | 5.13e-01 | 100.0% | 54.4% |
| 1tt5B02 | 1.10.10.520 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 | 0.73 | 62.0 | 5.35e-01 | 100.0% | 93.5% |
| 3ecsC01 | 1.20.120.1070 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain | 0.73 | 63.0 | 4.98e-01 | 100.0% | 66.0% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.71 | 59.0 | 5.07e-01 | 97.9% | 64.2% |
| 7z7vE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.71 | 56.0 | 5.21e-01 | 89.4% | 81.7% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.70 | 59.0 | 4.89e-01 | 100.0% | 64.8% |
| 3snoA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.70 | 61.0 | 4.53e-01 | 100.0% | 71.1% |
| 3cuqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.12e-01 | 100.0% | 66.7% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 47.0 | 4.42e-01 | 72.3% | 74.1% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.68 | 56.0 | 4.20e-01 | 100.0% | 64.7% |
| 3bz6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 4.68e-01 | 100.0% | 64.4% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 48.0 | 4.42e-01 | 100.0% | 57.6% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.66 | 51.0 | 3.99e-01 | 87.2% | 74.5% |
| 1ni5A02 | 1.20.59.20 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › | 0.65 | 53.0 | 4.54e-01 | 97.9% | 55.8% |
| 3qkaE02 | 1.10.287.2460 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 43.0 | 4.45e-01 | 70.2% | 79.1% |
| 4hacB01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.65 | 53.0 | 3.69e-01 | 100.0% | 42.5% |
| 1pbwB00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.64 | 54.0 | 3.66e-01 | 100.0% | 44.6% |
| 3rmqA02 | 6.10.140.1650 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 52.0 | 4.91e-01 | 95.7% | 75.0% |
| 3vwaA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.64 | 52.0 | 3.83e-01 | 97.9% | 66.4% |
| 1jr8A00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.63 | 54.0 | 4.24e-01 | 100.0% | 83.8% |
| 3hklA00 | 1.10.2000.10 | Mainly Alpha › Orthogonal Bundle › Frizzled cysteine-rich domain › Frizzled cysteine-rich domain | 0.63 | 52.0 | 3.79e-01 | 97.9% | 73.0% |
| 1pieA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.62 | 49.0 | 3.37e-01 | 100.0% | 36.5% |
| 1xriA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.62 | 50.0 | 3.63e-01 | 100.0% | 30.5% |
| 5jxxA02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.62 | 52.0 | 4.76e-01 | 100.0% | 77.3% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.62 | 50.0 | 4.60e-01 | 91.5% | 87.1% |
| 3crvA02 | 1.10.275.30 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › | 0.61 | 46.0 | 3.54e-01 | 80.9% | 67.6% |
| 2b4lA02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.61 | 50.0 | 3.62e-01 | 100.0% | 83.4% |
| 3t9jA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 49.0 | 3.63e-01 | 97.9% | 53.5% |
| 1wtyA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.61 | 47.0 | 3.63e-01 | 87.2% | 82.8% |
| 3u62A01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.61 | 49.0 | 3.59e-01 | 89.4% | 97.6% |
| 2vsnA02 | 3.40.50.11380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 46.0 | 3.00e-01 | 87.2% | 84.6% |
| 2gshA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 48.0 | 3.42e-01 | 97.9% | 31.5% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.58 | 48.0 | 4.09e-01 | 100.0% | 59.3% |
| 2rpaA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.57 | 46.0 | 3.99e-01 | 91.5% | 79.2% |
| 4qclA05 | 1.10.132.60 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain | 0.57 | 45.0 | 3.27e-01 | 100.0% | 82.7% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 46.0 | 3.65e-01 | 100.0% | 59.1% |
| 3onqA01 | 1.20.5.5100 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 40.0 | 4.15e-01 | 80.9% | 100.0% |
| 2lbfB01 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 43.0 | 4.00e-01 | 100.0% | 91.3% |
| 8jpdG01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.55 | 43.0 | 3.26e-01 | 100.0% | 45.5% |
| 1bccA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 43.0 | 2.98e-01 | 100.0% | 71.6% |
| 2kvdA02 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.53 | 37.0 | 3.53e-01 | 85.1% | 60.3% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 40.0 | 3.67e-01 | 100.0% | 61.5% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4380725 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 72.0 | 6.23e-01 | 100.0% | 66.7% |
| 3942599 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 73.0 | 6.09e-01 | 100.0% | 63.7% |
| 3224502 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.82 | 71.0 | 6.78e-01 | 100.0% | 94.5% |
| 4943354 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 68.0 | 5.71e-01 | 95.7% | 60.8% |
| 5072225 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 69.0 | 6.44e-01 | 100.0% | 80.0% |
| 5029778 | 101.1.2.43 ↗ | alpha arrays › HTH › HTH › winged helix domain › Pox_D5 | 0.78 | 70.0 | 5.61e-01 | 100.0% | 54.4% |
| 3636754 | 101.1.2.466 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C | 0.77 | 67.0 | 5.65e-01 | 100.0% | 67.5% |
| 4933997 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.77 | 67.0 | 5.01e-01 | 100.0% | 45.0% |
| 4979490 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.77 | 67.0 | 4.98e-01 | 100.0% | 45.8% |
| 5060192 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 66.0 | 5.98e-01 | 100.0% | 80.0% |
| 4314672 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.76 | 66.0 | 5.14e-01 | 100.0% | 45.7% |
| 5057991 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 65.0 | 5.80e-01 | 100.0% | 74.3% |
| 4392375 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.76 | 67.0 | 5.09e-01 | 100.0% | 50.0% |
| 3646654 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 67.0 | 4.96e-01 | 100.0% | 46.7% |
| 3358320 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.76 | 66.0 | 6.33e-01 | 100.0% | 87.3% |
| 4983039 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.76 | 66.0 | 5.23e-01 | 100.0% | 55.6% |
| 5027755 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 65.0 | 5.52e-01 | 100.0% | 63.7% |
| 3954610 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 65.0 | 5.64e-01 | 100.0% | 70.7% |
| 4976651 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 66.0 | 5.81e-01 | 100.0% | 70.0% |
| 5065308 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.75 | 65.0 | 4.85e-01 | 100.0% | 45.8% |
| 3340670 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 65.0 | 6.22e-01 | 100.0% | 87.3% |
| 5052010 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 64.0 | 5.45e-01 | 100.0% | 60.0% |
| 3434511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 64.0 | 5.84e-01 | 100.0% | 73.8% |
| 3727770 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 66.0 | 4.36e-01 | 100.0% | 51.1% |
| 3982565 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.75 | 63.0 | 6.04e-01 | 100.0% | 89.1% |
| 3932319 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.74 | 63.0 | 5.11e-01 | 100.0% | 58.9% |
| 4205244 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.74 | 62.0 | 5.45e-01 | 100.0% | 65.3% |
| 3402666 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.74 | 65.0 | 5.15e-01 | 100.0% | 57.9% |
| 3984312 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.73 | 61.0 | 5.29e-01 | 100.0% | 61.3% |
| 3217790 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.73 | 62.0 | 5.44e-01 | 95.7% | 91.4% |
| 3622919 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.73 | 61.0 | 5.28e-01 | 100.0% | 70.0% |
| 3709551 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 58.0 | 5.47e-01 | 100.0% | 73.3% |
| 3463735 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.73 | 63.0 | 6.06e-01 | 100.0% | 87.3% |
| 3606798 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 63.0 | 6.06e-01 | 100.0% | 92.7% |
| 3468869 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 63.0 | 6.03e-01 | 100.0% | 87.3% |
| 4378615 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.73 | 61.0 | 5.85e-01 | 95.7% | 83.6% |
| 3973616 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 58.0 | 5.44e-01 | 100.0% | 71.7% |
| 3627089 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.72 | 61.0 | 5.24e-01 | 100.0% | 75.0% |
| 3535212 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.72 | 60.0 | 5.03e-01 | 100.0% | 61.1% |
| 3421598 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.72 | 61.0 | 4.57e-01 | 100.0% | 45.6% |
| 143247 | 592.2.1.1 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › DUF1871 | 0.72 | 59.0 | 5.01e-01 | 95.7% | 62.2% |
| 3388668 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.72 | 61.0 | 5.04e-01 | 100.0% | 62.2% |
| 5022532 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 60.0 | 5.23e-01 | 100.0% | 72.0% |
| 3500575 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.71 | 58.0 | 5.54e-01 | 100.0% | 93.3% |
| 4934293 | 4993.1.1.0 ↗ | extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit | 0.71 | 60.0 | 5.15e-01 | 100.0% | 63.7% |
| 3448615 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.71 | 59.0 | 4.77e-01 | 100.0% | 59.0% |
| 4520559 | 592.2.1.1 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › DUF1871 | 0.70 | 60.0 | 5.03e-01 | 100.0% | 61.2% |
| 4960595 | 101.1.1.549 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_1_5 | 0.70 | 57.0 | 5.00e-01 | 100.0% | 91.3% |
| 4029825 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.70 | 60.0 | 5.03e-01 | 100.0% | 58.3% |
| 3442072 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.69 | 59.0 | 4.43e-01 | 100.0% | 44.8% |
| 3944357 | 101.1.1.394 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4158 | 0.69 | 58.0 | 4.91e-01 | 100.0% | 60.0% |
| 3363421 | 101.1.2.730 ↗ | alpha arrays › HTH › HTH › winged helix domain › Eaf7 | 0.69 | 58.0 | 5.31e-01 | 100.0% | 78.5% |
| 3447076 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 59.0 | 4.86e-01 | 100.0% | 62.2% |
| 4214506 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.69 | 55.0 | 5.32e-01 | 93.6% | 83.6% |
| 3396619 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.68 | 54.0 | 4.50e-01 | 100.0% | 58.0% |
| 3220510 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.68 | 56.0 | 5.53e-01 | 100.0% | 90.0% |
| 3987997 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 55.0 | 4.89e-01 | 100.0% | 74.7% |
| 3884427 | 103.11.1.1 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related › RMI1_N_N | 0.65 | 44.0 | 4.02e-01 | 76.6% | 50.8% |
| 3398024 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 51.0 | 4.09e-01 | 87.2% | 78.9% |
| 3396670 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.65 | 55.0 | 4.48e-01 | 100.0% | 80.0% |
| 4230026 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.65 | 55.0 | 4.61e-01 | 97.9% | 60.0% |
| 5018002 | 2007.2.3.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTP-SAK | 0.65 | 53.0 | 3.69e-01 | 95.7% | 31.2% |
| 3823640 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.64 | 55.0 | 4.19e-01 | 100.0% | 87.0% |
| 3253015 | 6088.1.1.2 ↗ | alpha arrays › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › PF26051 | 0.64 | 50.0 | 4.48e-01 | 100.0% | 67.5% |
| 3644264 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.63 | 53.0 | 5.25e-01 | 95.7% | 98.0% |
| 5084004 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.61 | 50.0 | 3.39e-01 | 95.7% | 46.2% |
| 3417818 | 101.1.1.138 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD | 0.61 | 49.0 | 4.14e-01 | 100.0% | 62.1% |
| 4098910 | 212.1.1.4 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N,GalKase_gal_bdg | 0.61 | 49.0 | 3.48e-01 | 100.0% | 31.4% |
| 4567493 | 212.1.1.4 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N,GalKase_gal_bdg | 0.61 | 47.0 | 3.28e-01 | 100.0% | 26.2% |
| 5051738 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.47e-01 | 100.0% | 77.1% |
| 4105091 | 101.8.1.2 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 | 0.59 | 46.0 | 3.24e-01 | 100.0% | 36.4% |
| 3486180 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.59 | 45.0 | 4.35e-01 | 87.2% | 94.5% |
| 3921832 | 4019.1.1.5 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Glutaminase | 0.55 | 44.0 | 3.23e-01 | 91.5% | 86.9% |
D3
medium
residues 85-95_113-152
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ornA01 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.61 | 47.0 | 3.68e-01 | 86.3% | 66.1% |
| 3s4lA00 | 1.10.3210.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.59 | 45.0 | 3.17e-01 | 90.2% | 85.3% |
| 2hr3D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 38.0 | 3.69e-01 | 72.5% | 95.2% |
| 2hv2C02 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.56 | 45.0 | 3.64e-01 | 100.0% | 88.0% |
| 3ihmA03 | 6.10.250.650 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 32.0 | 3.28e-01 | 92.2% | 57.1% |
| 1aueB00 | 1.20.120.150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain | 0.54 | 37.0 | 3.19e-01 | 74.5% | 67.0% |
| 7wu8B01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.53 | 41.0 | 3.74e-01 | 94.1% | 86.1% |
| 4ezbA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 41.0 | 2.92e-01 | 92.2% | 91.7% |
| 2qi2A03 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.52 | 42.0 | 3.64e-01 | 100.0% | 81.9% |
| 2llwA00 | 1.10.260.100 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.50 | 32.0 | 2.89e-01 | 86.3% | 46.5% |
| 4s2rQ03 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.50 | 40.0 | 2.60e-01 | 96.1% | 97.3% |