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MG450654.1__ATW62720.1__SCBWM1_gp36__00037

Bact-Vir

MG450654.1__ATW62720.1__SCBWM1_gp36__00037

Identity

Accession:
MG450654 ↗
Kingdom:
phage

Quality

80.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 59-149
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03330.25 best DPBB_1 81.9 4.50e-23 98.9% 87.9%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4avrA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.98 95.0 9.41e-01 100.0% 98.9%
3d30A01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.81 76.0 7.13e-01 100.0% 92.6%
4jcwA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.81 76.0 7.21e-01 100.0% 96.2%
3sumB00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.79 73.0 6.31e-01 98.9% 87.5%
1qcsA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.79 65.0 6.85e-01 100.0% 97.6%
1cr5A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.78 62.0 6.67e-01 100.0% 98.7%
1yleA02 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.78 52.0 6.07e-01 98.9% 95.4%
4ga6A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.76 64.0 6.68e-01 98.9% 97.6%
1bw3A00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.76 69.0 6.18e-01 100.0% 95.2%
3hu1A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.75 63.0 6.24e-01 100.0% 85.4%
2g5dA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.74 68.0 5.19e-01 100.0% 50.7%
3czbA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.74 69.0 5.46e-01 100.0% 57.6%
3ougA00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.73 61.0 5.76e-01 100.0% 75.5%
2ae0X01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.73 67.0 5.31e-01 100.0% 60.6%
1cz4A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.73 63.0 6.30e-01 100.0% 92.4%
1zc1A01 2.40.40.50 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain 0.72 66.0 6.31e-01 100.0% 92.2%
2napA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.70 63.0 5.84e-01 97.8% 99.1%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.70 57.0 5.91e-01 100.0% 96.4%
1h0hA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.69 63.0 5.05e-01 100.0% 73.9%
1ogyA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.68 61.0 5.53e-01 98.9% 94.3%
7eu1A01 1.10.274.100 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 0.67 62.0 5.27e-01 100.0% 73.9%
2e7zA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 61.0 4.99e-01 100.0% 83.2%
2vpzA05 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.66 59.0 4.92e-01 98.9% 80.5%
7nz1G01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.65 58.0 5.73e-01 96.7% 100.0%
2iv2X04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.64 59.0 5.76e-01 100.0% 99.0%
1ktbA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 45.0 4.57e-01 100.0% 74.7%
1b23P03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 40.0 3.97e-01 100.0% 63.8%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.60 50.0 4.56e-01 91.2% 87.6%
4gklA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 41.0 4.19e-01 100.0% 73.9%
2vbuA01 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.58 51.0 4.57e-01 100.0% 97.7%
4mloA01 2.60.120.810 Mainly Beta › Sandwich › Jelly Rolls › 0.58 35.0 2.92e-01 100.0% 34.6%
4il7A00 2.60.120.1300 Mainly Beta › Sandwich › Jelly Rolls › 0.58 38.0 3.96e-01 100.0% 72.9%
2d7eA01 3.40.1440.60 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain 0.56 32.0 3.30e-01 92.3% 56.7%
5by5A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 41.0 3.74e-01 100.0% 61.7%
1a8pA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 47.0 4.70e-01 100.0% 95.8%
1miqA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.53 45.0 3.81e-01 93.4% 76.3%
1bu8A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.52 36.0 3.43e-01 93.4% 60.4%
3lzqA00 2.60.40.2480 Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type 0.52 45.0 3.83e-01 97.8% 73.2%
2lgnA00 2.60.40.2850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 32.0 3.71e-01 96.7% 87.9%
2ed8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.69e-01 98.9% 76.7%
6b9tF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 38.0 3.62e-01 100.0% 67.0%
3nmeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 31.0 3.16e-01 93.4% 60.4%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3165363 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.99 96.0 7.55e-01 100.0% 56.4%
3974469 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.98 96.0 9.42e-01 100.0% 97.9%
4419943 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.98 95.0 9.17e-01 100.0% 93.0%
4370157 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.97 94.0 7.77e-01 100.0% 67.1%
3976753 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.93 90.0 7.33e-01 100.0% 60.7%
4880811 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 62.0 6.89e-01 72.5% 100.0%
4396535 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.86 71.0 7.54e-01 100.0% 97.5%
4243381 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.86 81.0 7.87e-01 100.0% 95.9%
3187650 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.85 81.0 7.37e-01 100.0% 94.8%
4500954 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 62.0 6.84e-01 100.0% 92.0%
3726745 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 79.0 7.56e-01 100.0% 98.1%
4299713 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.84 79.0 7.49e-01 100.0% 94.3%
3274054 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.84 79.0 7.11e-01 100.0% 84.2%
4115281 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.83 79.0 7.12e-01 100.0% 94.9%
3720989 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.83 79.0 7.31e-01 100.0% 93.6%
3264281 1.1.2.33 beta barrels › cradle loop barrel › RIFT-related › double psi › PF29515 0.83 78.0 6.77e-01 100.0% 82.3%
4586145 1.1.2.3 beta barrels › cradle loop barrel › RIFT-related › double psi › Barwin 0.82 67.0 6.44e-01 84.6% 94.0%
4623065 1.1.2.14 beta barrels › cradle loop barrel › RIFT-related › double psi › Cerato-platanin 0.80 75.0 6.65e-01 100.0% 92.0%
4205030 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.80 68.0 7.08e-01 98.9% 96.5%
5028227 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 69.0 7.21e-01 98.9% 98.8%
4986590 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 67.0 6.96e-01 98.9% 95.3%
4200720 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 68.0 7.03e-01 98.9% 96.5%
4445483 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.79 68.0 7.04e-01 98.9% 96.5%
4931749 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 68.0 7.03e-01 98.9% 96.5%
5041263 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 67.0 6.99e-01 98.9% 96.5%
5076635 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 68.0 7.05e-01 100.0% 97.6%
4488210 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.78 66.0 6.89e-01 98.9% 95.3%
4977837 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 67.0 6.90e-01 98.9% 96.5%
4941448 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 67.0 6.92e-01 98.9% 96.5%
1141837 1.13.1.2 beta barrels › cradle loop barrel › Arginine N-succinyltransferase alpha chain C-terminal domain › Arginine N-succinyltransferase alpha chain C-terminal domain › PF29831 0.78 53.0 6.12e-01 100.0% 95.5%
4970929 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 67.0 6.96e-01 100.0% 97.6%
5069203 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 68.0 6.87e-01 100.0% 93.3%
4981335 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 67.0 6.95e-01 98.9% 97.6%
5055583 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 67.0 6.93e-01 98.9% 97.6%
1883479 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.77 67.0 6.76e-01 100.0% 93.3%
5053173 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 65.0 6.42e-01 100.0% 85.3%
3602941 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 66.0 6.81e-01 100.0% 96.5%
4526788 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.77 64.0 6.80e-01 97.8% 98.8%
5053341 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.77 69.0 6.69e-01 100.0% 88.0%
3973129 1.13.1.0 beta barrels › cradle loop barrel › Arginine N-succinyltransferase alpha chain C-terminal domain › Arginine N-succinyltransferase alpha chain C-terminal domain 0.77 53.0 6.06e-01 100.0% 95.6%
5060218 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 66.0 6.89e-01 98.9% 98.8%
5074694 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 63.0 5.41e-01 97.8% 57.1%
4946804 1.1.2.44 beta barrels › cradle loop barrel › RIFT-related › double psi › Glycos_trans_3N 0.76 65.0 6.78e-01 100.0% 97.6%
5060748 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 66.0 6.15e-01 100.0% 76.4%
3828556 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 71.0 6.00e-01 98.9% 94.3%
3332068 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 70.0 5.77e-01 98.9% 99.4%
5060583 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.76 65.0 6.78e-01 100.0% 98.8%
4938514 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 64.0 6.62e-01 96.7% 95.3%
5054391 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 64.0 6.67e-01 100.0% 96.5%
3463336 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 71.0 6.85e-01 100.0% 96.0%
4970084 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 66.0 6.82e-01 98.9% 100.0%
5074983 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 64.0 6.49e-01 100.0% 92.2%
3605376 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.75 70.0 6.95e-01 100.0% 96.8%
4263053 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 63.0 6.58e-01 98.9% 96.5%
5053172 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 64.0 6.66e-01 100.0% 97.6%
5052052 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.75 65.0 6.40e-01 100.0% 88.4%
4979696 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 64.0 6.62e-01 100.0% 97.6%
5077330 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 63.0 5.97e-01 98.9% 77.1%
4021338 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 69.0 6.69e-01 100.0% 95.0%
5001338 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.74 66.0 6.51e-01 100.0% 91.6%
3748306 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 68.0 6.74e-01 100.0% 95.8%
4122334 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.74 62.0 5.28e-01 100.0% 57.9%
4639326 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.74 62.0 5.76e-01 100.0% 73.6%
4030729 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.74 69.0 6.54e-01 100.0% 94.3%
4145927 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.74 61.0 5.33e-01 100.0% 60.0%
4027672 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.74 68.0 6.47e-01 100.0% 86.7%
4669978 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 61.0 5.58e-01 100.0% 68.1%
4013955 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 68.0 6.06e-01 100.0% 94.4%
3557903 1.1.2.19 beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.74 65.0 6.44e-01 100.0% 91.6%
4087090 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.73 61.0 5.31e-01 100.0% 60.0%
4245831 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.73 61.0 5.25e-01 100.0% 57.9%
4040376 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.73 61.0 5.38e-01 100.0% 62.3%
5053174 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 61.0 6.23e-01 100.0% 92.2%
3186315 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 67.0 6.48e-01 100.0% 94.0%
5042283 208.1.1.56 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › MazE_antitoxin 0.72 67.0 4.55e-01 100.0% 30.5%
3412967 1.1.2.19 beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.72 64.0 6.51e-01 100.0% 97.8%
4485138 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.72 60.0 5.38e-01 100.0% 64.8%
3783660 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 65.0 6.32e-01 100.0% 89.0%
4508340 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 67.0 6.33e-01 100.0% 85.7%
5032396 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 66.0 6.44e-01 100.0% 90.0%
5000008 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.72 66.0 5.99e-01 98.9% 90.0%
4890564 101.1.2.869 alpha arrays › HTH › HTH › winged helix domain › IML1_N 0.71 58.0 6.16e-01 98.9% 98.8%
4200338 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 66.0 6.27e-01 100.0% 93.3%
4357009 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 61.0 6.37e-01 96.7% 98.8%
3169042 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.70 63.0 6.15e-01 100.0% 89.0%
4990996 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 64.0 5.55e-01 100.0% 92.1%
4405973 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.70 63.0 6.21e-01 100.0% 92.6%
3391397 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.70 59.0 5.99e-01 100.0% 92.2%
5008659 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 63.0 5.44e-01 98.9% 93.6%
3386113 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 62.0 5.95e-01 98.9% 92.4%
3343849 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 59.0 5.90e-01 98.9% 93.7%
4958644 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 59.0 5.83e-01 96.7% 100.0%
3627366 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.61 56.0 5.45e-01 100.0% 93.0%
5081216 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.53 40.0 3.86e-01 100.0% 70.5%