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MG450654.1__ATW62778.1__SCBWM1_gp94__00095

Bact-Vir

MG450654.1__ATW62778.1__SCBWM1_gp94__00095

Identity

Accession:
MG450654 ↗
Kingdom:
phage

Quality

57.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aokuangvirus› Synechococcus_phage_S-CBWM1

TaxID: 2053653

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-23_82-163
PDB
D2 medium residues 24-66
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wa7A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.61 42.0 2.44e-01 100.0% 7.1%
3ikwA02 3.10.540.20 Alpha Beta › Roll › duf1285 like fold › 0.58 49.0 4.27e-01 100.0% 80.0%
2jl6101 2.20.150.30 Mainly Beta › Single Sheet › putative 5-dehydro-2- deoxygluconokinase like fold › 0.55 39.0 3.90e-01 97.7% 81.4%
1w2wB00 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.54 45.0 3.03e-01 100.0% 24.6%
1q1uA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 37.0 2.77e-01 79.1% 34.8%
4dzdA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.53 35.0 2.61e-01 95.3% 23.6%
3fi7A02 4.10.80.30 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 6 0.53 32.0 3.53e-01 100.0% 85.2%
4mb8D00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.53 43.0 2.66e-01 97.7% 14.5%
4bwiB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 41.0 2.75e-01 100.0% 21.1%
2qddA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 38.0 2.74e-01 97.7% 26.2%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.51 33.0 3.33e-01 100.0% 60.9%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3719123 304.102.1.1 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.69 52.0 3.08e-01 100.0% 10.6%
3709681 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 43.0 3.47e-01 74.4% 34.1%
3684690 328.1.1.0 ↗ a+b two layers › IF3-like › AlbA-like › AlbA-like 0.65 42.0 3.36e-01 100.0% 32.2%
3935723 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.62 51.0 3.57e-01 95.3% 48.3%
4026565 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.58 43.0 3.53e-01 86.0% 61.1%
4608078 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.56 46.0 2.75e-01 100.0% 11.7%
4883268 304.139.2.1 ↗ a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7f/Csy3 › Cas_Csy3 0.54 42.0 2.58e-01 97.7% 42.6%
4528481 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.52 37.0 2.93e-01 97.7% 34.0%
4851773 1.1.13.69 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DTP-pb9_A-dom_N 0.51 36.0 3.31e-01 97.7% 53.7%
3620279 3343.1.1.2 ↗ alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal 0.50 40.0 2.25e-01 93.0% 7.7%
3682431 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.50 40.0 3.54e-01 100.0% 61.6%