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MG450654.1__ATW62782.1__SCBWM1_gp98__00099
Bact-VirMG450654.1__ATW62782.1__SCBWM1_gp98__00099
Identity
- Accession:
- MG450654 ↗
- Kingdom:
- phage
Quality
62.1
mean pLDDT
Taxonomy
TaxID: 2053653
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-139
D2
high
residues 153-197
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zpjA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 63.0 | 4.18e-01 | 100.0% | 90.1% |
| 4evsA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 62.0 | 4.15e-01 | 100.0% | 28.1% |
| 1o9aA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.70 | 48.0 | 4.91e-01 | 91.1% | 75.0% |
| 4eygA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 61.0 | 4.09e-01 | 100.0% | 28.6% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 56.0 | 4.17e-01 | 100.0% | 92.9% |
| 2ci9B00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.67 | 56.0 | 4.45e-01 | 100.0% | 46.0% |
| 6pxcA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.65 | 54.0 | 4.25e-01 | 100.0% | 45.2% |
| 3lkbA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 57.0 | 3.82e-01 | 100.0% | 27.5% |
| 6mzoA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 52.0 | 3.96e-01 | 100.0% | 47.6% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.62 | 50.0 | 3.99e-01 | 93.3% | 93.0% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 49.0 | 4.09e-01 | 97.8% | 51.6% |
| 1bf5A04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 47.0 | 3.76e-01 | 95.6% | 43.4% |
| 5wceA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.62 | 45.0 | 3.22e-01 | 77.8% | 31.0% |
| 2ox7A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.60 | 44.0 | 3.89e-01 | 80.0% | 66.7% |
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 45.0 | 4.29e-01 | 91.1% | 68.4% |
| 1qyaB01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.60 | 50.0 | 3.61e-01 | 100.0% | 43.8% |
| 6wo0A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.60 | 48.0 | 3.19e-01 | 95.6% | 46.0% |
| 3li9A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 46.0 | 3.46e-01 | 91.1% | 39.5% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.58 | 46.0 | 3.90e-01 | 100.0% | 67.0% |
| 1u0kA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.58 | 47.0 | 3.51e-01 | 97.8% | 46.2% |
| 6g1yA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 46.0 | 3.53e-01 | 93.3% | 36.7% |
| 3licA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 43.0 | 3.11e-01 | 93.3% | 30.9% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.58 | 39.0 | 4.08e-01 | 71.1% | 83.8% |
| 3kysA00 | 2.70.50.80 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.58 | 45.0 | 3.00e-01 | 91.1% | 64.4% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 44.0 | 3.66e-01 | 100.0% | 47.5% |
| 4b9gA00 | 2.60.40.3480 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 44.0 | 3.12e-01 | 91.1% | 62.3% |
| 4l0mA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.55 | 39.0 | 2.53e-01 | 77.8% | 56.4% |
| 1s7jA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 47.0 | 3.41e-01 | 100.0% | 47.0% |
| 2budA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 40.0 | 3.31e-01 | 84.4% | 48.9% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 40.0 | 3.85e-01 | 91.1% | 68.4% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 43.0 | 3.00e-01 | 91.1% | 43.3% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 41.0 | 3.81e-01 | 86.7% | 66.1% |
| 1fsuA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.54 | 41.0 | 2.53e-01 | 91.1% | 79.5% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 37.0 | 3.51e-01 | 77.8% | 56.5% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 3.26e-01 | 82.2% | 65.1% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 44.0 | 2.80e-01 | 100.0% | 38.2% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 38.0 | 3.43e-01 | 82.2% | 56.1% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 37.0 | 3.49e-01 | 82.2% | 60.0% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.52 | 41.0 | 3.11e-01 | 100.0% | 32.4% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.52 | 38.0 | 2.87e-01 | 88.9% | 83.3% |
| 3ghgB02 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.51 | 39.0 | 2.61e-01 | 100.0% | 17.9% |
| 1xi7A00 | 4.10.40.20 | Few Secondary Structures › Irregular › Omega-AgatoxinV › | 0.51 | 39.0 | 3.97e-01 | 97.8% | 93.6% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 37.0 | 3.34e-01 | 84.4% | 54.4% |
| 1uc8A03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 37.0 | 3.06e-01 | 77.8% | 66.0% |
| 1m1jE01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.51 | 39.0 | 2.92e-01 | 100.0% | 29.7% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3517867 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.69 | 58.0 | 4.26e-01 | 100.0% | 35.4% |
| 3838288 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 57.0 | 4.33e-01 | 100.0% | 75.7% |
| 3505867 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.67 | 44.0 | 3.81e-01 | 71.1% | 41.3% |
| 3651713 | 223.1.1.12 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_2 | 0.67 | 53.0 | 3.67e-01 | 95.6% | 26.9% |
| 3226032 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.66 | 56.0 | 5.30e-01 | 93.3% | 83.0% |
| 4337723 | 4000.1.1.1 ↗ | a+b two layers › Escherichia coli HybE › Escherichia coli HybE › Escherichia coli HybE › NiFe-hyd_HybE | 0.66 | 53.0 | 3.80e-01 | 93.3% | 50.0% |
| 3519226 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.66 | 52.0 | 5.09e-01 | 88.9% | 88.0% |
| 5016546 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 53.0 | 4.56e-01 | 93.3% | 61.3% |
| 3400787 | 5.1.4.408 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C | 0.65 | 51.0 | 2.92e-01 | 93.3% | 13.3% |
| 3623941 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.65 | 52.0 | 5.24e-01 | 93.3% | 91.1% |
| 4087511 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.64 | 53.0 | 4.14e-01 | 100.0% | 80.9% |
| 3625308 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.62 | 52.0 | 3.92e-01 | 100.0% | 36.8% |
| 3737235 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.62 | 44.0 | 3.99e-01 | 91.1% | 53.8% |
| 3623942 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.61 | 48.0 | 4.56e-01 | 93.3% | 75.9% |
| 5038531 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.61 | 47.0 | 4.22e-01 | 86.7% | 80.0% |
| 4020590 | 2008.1.1.99 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_12 | 0.60 | 49.0 | 3.14e-01 | 100.0% | 26.9% |
| 3386292 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 48.0 | 3.83e-01 | 93.3% | 42.0% |
| 5004588 | 2011.2.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 | 0.60 | 47.0 | 2.95e-01 | 88.9% | 19.6% |
| 3967506 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.59 | 46.0 | 3.06e-01 | 100.0% | 54.2% |
| 3941356 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.59 | 48.0 | 3.67e-01 | 100.0% | 37.5% |
| 5045741 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 45.0 | 4.17e-01 | 93.3% | 76.9% |
| 3937854 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 47.0 | 3.83e-01 | 100.0% | 45.0% |
| 5006332 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.58 | 44.0 | 3.78e-01 | 93.3% | 50.6% |
| 3718300 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 39.0 | 3.36e-01 | 73.3% | 42.7% |
| 3936468 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 3.75e-01 | 100.0% | 50.0% |
| 5059673 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 46.0 | 3.73e-01 | 100.0% | 82.0% |
| 4080655 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.57 | 42.0 | 3.53e-01 | 91.1% | 46.3% |
| 1177166 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 39.0 | 4.01e-01 | 75.6% | 75.0% |
| 4680387 | 1.1.10.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Surface presentation of antigens (SPOA) | 0.56 | 44.0 | 3.78e-01 | 93.3% | 76.2% |
| 4977613 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.56 | 43.0 | 3.28e-01 | 100.0% | 34.3% |
| 3371853 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.55 | 40.0 | 2.68e-01 | 84.4% | 28.1% |
| 4951973 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 38.0 | 3.62e-01 | 75.6% | 61.8% |
| 3558188 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.53 | 40.0 | 3.48e-01 | 84.4% | 50.7% |
| 4216034 | 7512.1.1.24 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5 | 0.53 | 38.0 | 2.40e-01 | 80.0% | 17.4% |
| 3876831 | 389.1.2.8 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › PF28847 | 0.53 | 43.0 | 3.80e-01 | 100.0% | 65.3% |
| 3674876 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.52 | 39.0 | 2.92e-01 | 88.9% | 47.1% |
| 3762420 | 269.1.1.1 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C | 0.52 | 40.0 | 2.49e-01 | 100.0% | 13.2% |
| 3647873 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.52 | 39.0 | 3.15e-01 | 91.1% | 65.7% |
| 4973665 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 41.0 | 3.47e-01 | 95.6% | 75.3% |
| 5055120 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.51 | 34.0 | 2.63e-01 | 71.1% | 61.7% |
| 3574976 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.51 | 42.0 | 3.99e-01 | 100.0% | 92.7% |
| 3502668 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 40.0 | 3.74e-01 | 100.0% | 72.3% |
| 3920666 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 39.0 | 3.29e-01 | 100.0% | 46.7% |
| 3967986 | 4.7.1.2 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF | 0.50 | 38.0 | 3.33e-01 | 91.1% | 70.0% |
| 3926546 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.50 | 35.0 | 2.50e-01 | 80.0% | 31.8% |
| 3344424 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.50 | 41.0 | 2.58e-01 | 100.0% | 17.4% |
| 5036923 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.50 | 39.0 | 2.30e-01 | 95.6% | 28.1% |