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MG545917.1__AUG87701.1__X__00001
Bact-VirMG545917.1__AUG87701.1__X__00001
Identity
- Accession:
- MG545917 ↗
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autosignataviridae›
Trungvirus›
Vibrio_phage_VEN
TaxID: 2059879
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-41
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dgpA00 | 3.30.70.2610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.79 | 67.0 | 5.80e-01 | 100.0% | 62.9% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.77 | 65.0 | 4.91e-01 | 100.0% | 43.8% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.73 | 61.0 | 5.16e-01 | 100.0% | 58.6% |
| 3rheA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.73 | 62.0 | 4.53e-01 | 100.0% | 36.8% |
| 2lepA00 | 3.30.70.2350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 59.0 | 5.19e-01 | 100.0% | 65.1% |
| 7bgsA01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.73 | 53.0 | 3.79e-01 | 84.2% | 26.1% |
| 1mpyA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.72 | 61.0 | 4.10e-01 | 100.0% | 29.1% |
| 3e5dA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.72 | 58.0 | 4.15e-01 | 97.4% | 36.0% |
| 1mhyD00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.70 | 50.0 | 2.81e-01 | 78.9% | 27.1% |
| 4yurA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.67 | 53.0 | 3.60e-01 | 86.8% | 43.7% |
| 3t5xA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 49.0 | 4.32e-01 | 100.0% | 76.4% |
| 1kllA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.65 | 52.0 | 3.83e-01 | 100.0% | 35.2% |
| 3jckC00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 51.0 | 3.02e-01 | 100.0% | 12.7% |
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 47.0 | 4.03e-01 | 73.7% | 90.0% |
| 2xmjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 51.0 | 4.52e-01 | 100.0% | 68.3% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.62 | 49.0 | 3.53e-01 | 97.4% | 47.7% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 51.0 | 4.33e-01 | 92.1% | 80.0% |
| 5ttjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 52.0 | 3.25e-01 | 97.4% | 57.9% |
| 3ng7X01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 50.0 | 3.16e-01 | 97.4% | 59.7% |
| 4izzB03 | 1.10.10.1670 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain | 0.60 | 50.0 | 3.60e-01 | 94.7% | 93.9% |
| 5erdA03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.60 | 48.0 | 3.62e-01 | 100.0% | 41.8% |
| 3egyX00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.59 | 45.0 | 2.81e-01 | 86.8% | 17.5% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 44.0 | 3.48e-01 | 100.0% | 36.1% |
| 4lqbA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 42.0 | 3.16e-01 | 100.0% | 31.5% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 50.0 | 3.94e-01 | 100.0% | 80.8% |
| 1zpsA01 | 3.10.20.810 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase | 0.54 | 41.0 | 3.33e-01 | 97.4% | 73.7% |
| 2l4mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.48e-01 | 97.4% | 65.2% |
| 1zxhA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 40.0 | 3.72e-01 | 100.0% | 96.4% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.50 | 42.0 | 3.66e-01 | 92.1% | 77.2% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4926952 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.85 | 74.0 | 5.99e-01 | 97.4% | 52.9% |
| 3292464 | 4340.1.1.2 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C | 0.84 | 72.0 | 6.40e-01 | 97.4% | 67.3% |
| 4660335 | 327.16.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 | 0.83 | 75.0 | 6.58e-01 | 100.0% | 72.7% |
| 3258420 | 4340.1.1.2 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C | 0.83 | 69.0 | 6.21e-01 | 97.4% | 67.3% |
| 3790028 | 4340.1.1.2 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C | 0.82 | 67.0 | 5.80e-01 | 97.4% | 58.7% |
| 3550962 | 4340.1.1.2 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C | 0.81 | 67.0 | 6.06e-01 | 97.4% | 67.3% |
| 4503510 | 4340.1.1.2 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C | 0.81 | 67.0 | 5.73e-01 | 97.4% | 58.5% |
| 4471453 | 327.16.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 | 0.81 | 71.0 | 6.11e-01 | 100.0% | 66.7% |
| 3975095 | 327.16.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 | 0.81 | 70.0 | 6.01e-01 | 97.4% | 63.3% |
| 5015890 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.81 | 69.0 | 5.27e-01 | 100.0% | 43.3% |
| 4167630 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.81 | 71.0 | 5.33e-01 | 100.0% | 61.1% |
| 2117204 | 4340.1.1.2 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C | 0.80 | 66.0 | 5.27e-01 | 97.4% | 45.7% |
| 4773815 | 4340.1.1.2 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C | 0.79 | 67.0 | 5.80e-01 | 100.0% | 62.9% |
| 3732496 | 4340.1.1.2 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C | 0.79 | 65.0 | 5.87e-01 | 97.4% | 67.3% |
| 3934231 | 4340.1.1.2 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb2_C | 0.78 | 63.0 | 5.57e-01 | 97.4% | 61.7% |
| 5023789 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.78 | 65.0 | 5.07e-01 | 97.4% | 43.5% |
| 3341667 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.78 | 63.0 | 5.04e-01 | 100.0% | 55.3% |
| 4407103 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.78 | 67.0 | 5.81e-01 | 100.0% | 70.0% |
| 4969054 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.77 | 63.0 | 5.22e-01 | 100.0% | 62.7% |
| 4079863 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.75 | 59.0 | 4.30e-01 | 89.5% | 31.8% |
| 4327654 | 327.16.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 | 0.75 | 67.0 | 5.71e-01 | 100.0% | 66.7% |
| 5012700 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.75 | 61.0 | 4.90e-01 | 100.0% | 47.1% |
| 4172564 | 101.1.9.134 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 | 0.75 | 62.0 | 5.42e-01 | 97.4% | 65.0% |
| 3493366 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.74 | 60.0 | 5.13e-01 | 100.0% | 58.6% |
| 3647855 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.73 | 64.0 | 3.81e-01 | 100.0% | 90.2% |
| 4945921 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 58.0 | 4.99e-01 | 100.0% | 64.3% |
| 2713319 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.73 | 60.0 | 5.20e-01 | 100.0% | 61.5% |
| 3201747 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 58.0 | 3.32e-01 | 100.0% | 10.7% |
| 5068738 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 57.0 | 4.99e-01 | 97.4% | 70.8% |
| 4011288 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.72 | 57.0 | 5.14e-01 | 100.0% | 61.7% |
| 3185841 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.72 | 58.0 | 4.97e-01 | 100.0% | 54.3% |
| 4515846 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.70 | 58.0 | 3.67e-01 | 100.0% | 19.5% |
| 4597621 | 150.1.2.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Phenol_Hydrox | 0.70 | 50.0 | 2.81e-01 | 78.9% | 26.5% |
| 3715642 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.70 | 61.0 | 4.87e-01 | 100.0% | 62.7% |
| 3503496 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.69 | 53.0 | 4.88e-01 | 100.0% | 78.3% |
| 3597486 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 53.0 | 4.62e-01 | 100.0% | 70.0% |
| 3609864 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.68 | 53.0 | 3.41e-01 | 100.0% | 21.4% |
| 3785105 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 55.0 | 4.28e-01 | 100.0% | 47.4% |
| 3584449 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.67 | 53.0 | 4.40e-01 | 100.0% | 58.7% |
| 4467985 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.66 | 52.0 | 4.06e-01 | 100.0% | 48.0% |
| 4677652 | 2004.1.1.1017 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12, UvrD_C | 0.65 | 52.0 | 3.13e-01 | 94.7% | 13.4% |
| 3179548 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.65 | 50.0 | 4.41e-01 | 100.0% | 71.4% |
| 5050882 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 50.0 | 4.48e-01 | 100.0% | 70.8% |
| 3598016 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 54.0 | 4.36e-01 | 100.0% | 62.5% |
| 4407982 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.63 | 51.0 | 4.18e-01 | 100.0% | 68.8% |
| 4002798 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.63 | 48.0 | 4.23e-01 | 100.0% | 67.1% |
| 3624382 | 601.42.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle in ROQ domain › Helical bundle in ROQ domain | 0.63 | 53.0 | 3.54e-01 | 100.0% | 81.8% |
| 56460 | 150.1.2.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase | 0.61 | 53.0 | 2.95e-01 | 100.0% | 76.1% |
| 4641033 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 47.0 | 3.82e-01 | 100.0% | 50.0% |
| 3309668 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.60 | 48.0 | 3.79e-01 | 100.0% | 54.7% |
| 3195581 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.60 | 49.0 | 2.98e-01 | 97.4% | 17.4% |
| 3725291 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.59 | 44.0 | 3.52e-01 | 92.1% | 36.8% |
| 3763444 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.58 | 41.0 | 3.33e-01 | 86.8% | 54.7% |
| 3695186 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.57 | 40.0 | 3.44e-01 | 86.8% | 45.0% |
| 3725174 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.56 | 40.0 | 3.35e-01 | 84.2% | 45.0% |
| 3936571 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 3.63e-01 | 100.0% | 73.3% |
| 5024860 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.56 | 47.0 | 2.89e-01 | 97.4% | 57.5% |
| 3935843 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.56 | 39.0 | 3.32e-01 | 76.3% | 80.0% |