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QAS68849.1

Arc-Vir

MG550112__QAS68849.1__HFTV1-gp16__00016

Identity

Accession:
MG550112 ↗
Protein ID:
QAS68849.1 ↗
Kingdom:
archaea

Quality

76.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kirjokansivirales› Haloferuviridae› Retbasiphovirus› Haloferax_tailed_virus_1

TaxID: 2507575

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-86
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k5cA00 3.10.20.830 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bifunctional heparan sulphate n-deacetylase/n-sulphotransferase 0.61 49.0 4.24e-01 100.0% 71.6%
2creA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 46.0 4.17e-01 100.0% 78.9%
2uzgA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 40.0 3.29e-01 85.4% 69.5%
2jubA01 3.30.160.860 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 34.0 3.59e-01 100.0% 94.6%
2hiyA01 3.30.70.1280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains 0.50 41.0 3.51e-01 100.0% 80.7%
7zj3D01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.50 40.0 3.52e-01 100.0% 56.8%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3306475 376.1.6.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR 0.62 42.0 3.79e-01 93.8% 50.7%
4001708 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.61 45.0 4.10e-01 100.0% 58.8%
4943069 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 40.0 3.00e-01 97.9% 26.4%
3460381 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.56 42.0 3.91e-01 100.0% 64.6%
3737810 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.56 45.0 4.09e-01 100.0% 65.2%
3911271 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.55 42.0 3.97e-01 100.0% 67.7%
3225707 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.55 46.0 4.16e-01 100.0% 68.6%
3939167 376.1.1.98 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF29721 0.55 42.0 3.53e-01 100.0% 94.5%
3354588 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.54 43.0 4.11e-01 95.8% 78.3%
3223788 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.54 40.0 3.12e-01 100.0% 33.6%
3628783 376.1.1.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.53 43.0 4.10e-01 97.9% 78.3%
3932949 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.53 41.0 3.56e-01 100.0% 53.8%
3706777 386.1.1.14 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-LYAR 0.52 37.0 3.61e-01 77.1% 80.0%
5011920 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 43.0 3.77e-01 100.0% 93.8%
3792562 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 34.0 3.15e-01 93.8% 52.3%
3519854 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 34.0 2.01e-01 70.8% 18.1%