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MG575421.1__QDH85530.1__X__00023
Bact-VirMG575421.1__QDH85530.1__X__00023
Identity
- Accession:
- MG575421 ↗
- Kingdom:
- phage
Quality
68.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-107
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k3qA00 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.61 | 31.0 | 2.98e-01 | 82.5% | 40.7% |
| 6xm1A02 | 3.90.830.10 | Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a | 0.58 | 34.0 | 3.27e-01 | 79.6% | 52.2% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 34.0 | 3.82e-01 | 81.6% | 75.3% |
| 8ek4A01 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.57 | 36.0 | 3.35e-01 | 83.5% | 50.4% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.55 | 35.0 | 3.40e-01 | 83.5% | 58.0% |
| 3etvA01 | 1.10.287.3290 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 40.0 | 4.39e-01 | 74.8% | 98.8% |
| 1bgcA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 41.0 | 3.56e-01 | 81.6% | 91.8% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.52 | 31.0 | 3.33e-01 | 83.5% | 66.3% |
| 3d3mA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.50 | 42.0 | 3.72e-01 | 95.1% | 93.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3670774 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.66 | 40.0 | 3.75e-01 | 84.5% | 49.6% |
| 3222373 | 605.4.1.18 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › PF29357 | 0.64 | 36.0 | 4.01e-01 | 84.5% | 69.4% |
| 4176312 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.61 | 35.0 | 3.63e-01 | 80.6% | 60.0% |
| 3214360 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.59 | 33.0 | 3.59e-01 | 97.1% | 64.7% |
| 3750735 | 601.1.2.15 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Frag1 | 0.58 | 37.0 | 3.80e-01 | 90.3% | 67.0% |
| 3495293 | 1203.1.2.0 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 | 0.55 | 43.0 | 3.88e-01 | 82.5% | 96.4% |
| 3196266 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 30.0 | 3.10e-01 | 76.7% | 52.0% |
| 3996112 | 601.7.1.21 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › NICE-3 | 0.54 | 39.0 | 3.75e-01 | 75.7% | 65.8% |
| 3797599 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.54 | 39.0 | 3.89e-01 | 76.7% | 72.7% |
| 4860885 | 633.6.1.6 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACAD9-ACADV_C | 0.53 | 34.0 | 3.45e-01 | 83.5% | 64.8% |
| 4955523 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.53 | 37.0 | 3.64e-01 | 77.7% | 66.1% |
| 3359819 | 185.1.1.2 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › LTP_2 | 0.53 | 36.0 | 3.82e-01 | 70.9% | 100.0% |
| 3228604 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.52 | 37.0 | 3.58e-01 | 74.8% | 65.8% |
| 3608496 | 622.1.1.5 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › TMEM18 | 0.51 | 35.0 | 3.34e-01 | 94.2% | 59.2% |