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MG575421.1__QDH85578.1__X__00071

Bact-Vir

MG575421.1__QDH85578.1__X__00071

Identity

Accession:
MG575421 ↗
Kingdom:
phage

Quality

78.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Proteus_phage_vB_PmiP_RS51pmB

TaxID: 2250313

Cluster

View cluster (247 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-111
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pp6A02 2.40.10.210 Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) 0.79 44.0 5.86e-01 82.9% 98.4%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.71 50.0 5.82e-01 82.9% 100.0%
3f3bA00 2.40.10.370 Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 0.69 57.0 5.64e-01 86.5% 94.8%
2kz4A00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.69 61.0 6.09e-01 94.6% 96.4%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.66 50.0 5.32e-01 81.1% 100.0%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.64 47.0 4.69e-01 91.0% 73.5%
1ia9A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 46.0 4.16e-01 74.8% 100.0%
2kcaA00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.63 51.0 5.15e-01 86.5% 91.7%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 49.0 3.97e-01 86.5% 67.6%
3fgeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 53.0 4.54e-01 95.5% 80.2%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 40.0 4.25e-01 88.3% 82.6%
5fahA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 45.0 4.47e-01 85.6% 79.5%
2furB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 46.0 3.78e-01 85.6% 68.9%
5brrE01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 45.0 4.29e-01 87.4% 81.3%
5fcrA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 45.0 4.42e-01 86.5% 81.1%
1autC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 45.0 4.22e-01 85.6% 79.1%
3h7tB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 45.0 4.37e-01 85.6% 81.1%
2zgcA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 44.0 4.26e-01 85.6% 81.0%
1m9uA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 44.0 4.18e-01 86.5% 80.3%
3qwnD01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.54 26.0 3.14e-01 83.8% 68.6%
2fgzA01 2.60.40.1130 Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain 0.53 37.0 3.66e-01 72.1% 79.1%
1uenA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 33.0 3.24e-01 73.0% 56.0%
1wxrA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 45.0 3.51e-01 96.4% 94.2%
4mypA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 35.0 3.40e-01 85.6% 64.5%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4669352 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.94 87.0 8.80e-01 98.2% 96.4%
3949274 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 68.0 6.79e-01 94.6% 98.3%
3502329 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 51.0 5.57e-01 72.1% 100.0%
5003311 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 59.0 5.93e-01 85.6% 99.1%
4034130 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.71 59.0 6.23e-01 91.0% 98.0%
4988096 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 57.0 5.72e-01 85.6% 98.2%
169594 1.1.13.14 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF3599 0.69 57.0 5.64e-01 86.5% 94.8%
3058418 1.1.13.2 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach 0.67 57.0 5.93e-01 100.0% 99.0%
3428387 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.62 47.0 3.95e-01 87.4% 48.9%
3843200 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.60 48.0 3.65e-01 85.6% 39.8%
4028981 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.59 47.0 3.81e-01 87.4% 90.5%
2595159 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.58 47.0 4.09e-01 87.4% 80.7%
3750304 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 32.0 3.15e-01 82.9% 49.2%
4771581 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.57 45.0 4.11e-01 85.6% 66.4%
3235083 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.56 45.0 3.34e-01 85.6% 37.2%
4189226 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 47.0 3.72e-01 92.8% 93.0%
3552749 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 46.0 3.70e-01 92.8% 90.1%
4432655 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 48.0 3.77e-01 96.4% 92.1%
3778454 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 44.0 3.81e-01 86.5% 55.4%
3391188 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 45.0 3.62e-01 92.8% 93.8%
5028431 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 34.0 3.89e-01 70.3% 91.3%
3991293 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 27.0 2.62e-01 73.0% 41.6%
3508173 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.51 35.0 3.83e-01 83.8% 83.2%
3700518 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.51 36.0 3.45e-01 73.0% 73.1%
5010503 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 33.0 3.54e-01 70.3% 77.9%