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MG592398.1__AUR81775.1__NVP1013O_28__00028

Bact-Vir

MG592398.1__AUR81775.1__NVP1013O_28__00028

Identity

Accession:
MG592398 ↗
Kingdom:
phage

Quality

54.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 476-549
PDB
D2 medium residues 16-55
PDB
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 3.64e-01 72.5% 44.4%
1eg7A02 3.30.1510.10 Alpha Beta › 2-Layer Sandwich › Domain 2, N(10)-formyltetrahydrofolate synthetase › Domain 2, N(10)-formyltetrahydrofolate synthetase 0.61 44.0 3.23e-01 80.0% 79.0%
2w2kA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 44.0 3.11e-01 87.5% 22.8%
3hwcA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.58 48.0 3.04e-01 95.0% 56.7%
1p97A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 47.0 3.49e-01 95.0% 38.6%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.72 48.0 2.81e-01 70.0% 72.8%
4032551 2498.1.1.7 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3,Peptidase_M3_N 0.67 47.0 2.60e-01 75.0% 5.2%
3173752 2002.1.1.192 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase 0.61 50.0 2.82e-01 100.0% 28.3%
3947658 2484.1.1.32 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C 0.59 41.0 2.54e-01 72.5% 11.9%
5053378 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.58 49.0 3.42e-01 100.0% 47.9%
7525 323.1.1.5 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.56 44.0 2.93e-01 87.5% 69.3%
3263160 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.55 46.0 3.56e-01 100.0% 71.4%
3264325 101.1.2.106 alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 0.54 39.0 2.59e-01 80.0% 21.7%
3249549 109.4.1.109 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 0.53 41.0 2.65e-01 100.0% 69.2%
D3 medium residues 213-266
PDB
D4 medium residues 668-779
PDB
CATH (86)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bwpA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.84 73.0 5.78e-01 96.4% 48.1%
2o14A02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.83 76.0 6.05e-01 96.4% 56.8%
2waaA02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.83 78.0 6.14e-01 99.1% 68.4%
4rw0A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.83 77.0 6.39e-01 98.2% 59.8%
3kvnA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.83 77.0 5.44e-01 100.0% 60.5%
1ivnA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.82 76.0 6.32e-01 97.3% 78.7%
3bzwF00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.82 76.0 5.71e-01 98.2% 58.0%
1k7cA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.80 72.0 5.53e-01 95.5% 57.9%
3milB00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.80 74.0 5.68e-01 99.1% 51.3%
2vptA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.80 75.0 6.01e-01 99.1% 62.7%
4k7jA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.79 74.0 5.76e-01 100.0% 51.8%
5b5lA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.78 72.0 5.73e-01 97.3% 62.8%
7tjbA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.75 69.0 5.53e-01 98.2% 59.2%
2cvhA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 61.0 4.93e-01 98.2% 52.3%
1szpB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 62.0 5.01e-01 100.0% 55.0%
1n5dA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 60.0 4.44e-01 97.3% 80.9%
3l77A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 60.0 4.67e-01 97.3% 79.1%
3svtA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 61.0 4.56e-01 100.0% 69.3%
4nqrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 53.0 4.71e-01 97.3% 60.6%
3itlD00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.66 53.0 3.56e-01 84.8% 48.0%
5g4kA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 60.0 4.56e-01 100.0% 72.0%
3edmD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 60.0 4.83e-01 100.0% 85.9%
1g0nB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 60.0 4.59e-01 100.0% 76.0%
4nimA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 59.0 4.64e-01 100.0% 78.8%
8fazD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 58.0 4.63e-01 98.2% 52.8%
5b1yA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 59.0 4.65e-01 99.1% 80.3%
5ilgB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 59.0 4.55e-01 100.0% 72.9%
3ksuB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 59.0 4.75e-01 100.0% 83.9%
3wdsA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 60.0 4.55e-01 100.0% 71.6%
5ig2A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 59.0 4.42e-01 99.1% 69.4%
6oz7B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 58.0 4.53e-01 96.4% 78.4%
5iz4A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 58.0 4.52e-01 98.2% 78.5%
3ai2A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 59.0 4.50e-01 100.0% 71.9%
4m9rB00 3.40.50.1460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 58.0 4.66e-01 100.0% 61.4%
4impA02 3.40.50.11460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 58.0 4.71e-01 100.0% 52.6%
3i3oG00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 58.0 4.52e-01 100.0% 75.1%
2c2xA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.64 52.0 4.71e-01 96.4% 63.6%
4b4uA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.64 47.0 5.22e-01 85.7% 100.0%
2a4kB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 58.0 4.83e-01 100.0% 77.6%
8eh2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 54.0 4.24e-01 94.6% 68.5%
1w6uD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 57.0 4.28e-01 100.0% 66.3%
2wjwA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 50.0 4.45e-01 96.4% 58.9%
5ix8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 56.0 5.01e-01 100.0% 69.2%
6ecpB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.63 53.0 4.84e-01 96.4% 70.3%
3mtqB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.62 49.0 4.65e-01 98.2% 69.3%
4ix9A00 3.40.50.10580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ATPase, V1 complex, subunit F 0.62 48.0 5.17e-01 96.4% 100.0%
5ailA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.62 54.0 4.62e-01 96.4% 78.9%
1tufA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.62 50.0 3.94e-01 90.2% 89.1%
1knwA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.62 50.0 3.95e-01 89.3% 89.4%
1yxmC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 54.0 4.15e-01 98.2% 62.9%
4iqyB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.61 55.0 4.42e-01 99.1% 87.7%
3r7wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 54.0 4.66e-01 99.1% 68.1%
3wtbC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 53.0 4.20e-01 98.2% 78.2%
4y9tA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 55.0 4.73e-01 100.0% 68.2%
1edzA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.60 50.0 4.77e-01 95.5% 77.9%
7wkqB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 52.0 4.33e-01 98.2% 83.7%
2jh3A02 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 48.0 4.66e-01 94.6% 78.9%
4bubA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.59 52.0 4.14e-01 97.3% 83.0%
2iksB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 52.0 4.50e-01 97.3% 64.8%
3lf2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 51.0 4.04e-01 97.3% 67.6%
6n2aB02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.59 48.0 3.81e-01 88.4% 79.0%
4yhsA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 53.0 5.13e-01 100.0% 89.7%
1jx6A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 53.0 4.81e-01 100.0% 76.2%
1tjyA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 52.0 4.73e-01 99.1% 76.5%
4rxtA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 53.0 4.70e-01 99.1% 74.7%
2wjwA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 52.0 4.26e-01 98.2% 66.8%
3g1wA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 52.0 4.75e-01 98.2% 78.8%
4ru1A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 51.0 4.71e-01 98.2% 76.4%
4d86A01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.58 49.0 4.22e-01 95.5% 80.9%
2ac2A01 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 51.0 4.49e-01 98.2% 87.3%
2fexA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.58 52.0 4.33e-01 97.3% 82.4%
6gt9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 51.0 4.42e-01 98.2% 66.7%
1tezA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 50.0 4.83e-01 96.4% 100.0%
2wagA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 48.0 3.90e-01 92.0% 59.0%
5izlA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 51.0 4.36e-01 99.1% 66.5%
3gbvA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 47.0 4.27e-01 97.3% 68.5%
3vzpC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 48.0 3.82e-01 97.3% 77.0%
5dcaA09 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 48.0 3.98e-01 98.2% 59.0%
2gmwA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 48.0 4.11e-01 97.3% 85.7%
3gffA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 46.0 3.38e-01 94.6% 66.5%
3l8hA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 46.0 3.97e-01 97.3% 82.0%
1kjwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 4.26e-01 98.2% 86.8%
2egvA02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.51 45.0 4.05e-01 100.0% 91.4%
3loqA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 45.0 4.19e-01 100.0% 97.2%
2x7jA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.50 42.0 3.56e-01 93.8% 76.9%
3wp0A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 43.0 3.75e-01 98.2% 91.7%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3902230 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.88 76.0 6.29e-01 100.0% 56.1%
3511453 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.84 73.0 5.77e-01 96.4% 48.6%
3953400 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.84 79.0 6.30e-01 100.0% 61.0%
3398275 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.83 72.0 5.59e-01 96.4% 45.3%
3209714 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.83 77.0 5.62e-01 98.2% 47.1%
1492214 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.83 77.0 6.39e-01 98.2% 59.8%
3584467 2007.5.1.0 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.83 72.0 6.06e-01 96.4% 58.3%
4145907 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.82 70.0 5.90e-01 96.4% 57.5%
None 0.82 76.0 5.01e-01 100.0% 40.7%
3288559 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.81 76.0 5.81e-01 99.1% 50.4%
4962645 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.80 74.0 5.77e-01 99.1% 53.3%
178870 2007.5.1.1 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL 0.80 74.0 5.66e-01 99.1% 50.8%
4478613 2007.5.1.0 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.79 71.0 5.66e-01 95.5% 60.5%
3738220 2007.5.1.1 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL 0.79 72.0 5.79e-01 97.3% 54.1%
3895495 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.79 69.0 5.81e-01 94.6% 57.8%
4018681 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.78 72.0 5.64e-01 100.0% 59.6%
3990099 2007.5.1.0 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.76 63.0 5.03e-01 97.3% 46.7%
4158084 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.71 64.0 5.06e-01 98.2% 51.1%
5039613 2004.1.1.1217 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7125 0.71 61.0 5.01e-01 98.2% 51.7%
4928346 2004.1.1.1219 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7504 0.70 58.0 4.92e-01 99.1% 54.1%
None 0.70 63.0 5.03e-01 98.2% 51.6%
4931190 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.70 62.0 4.97e-01 98.2% 51.0%
5056137 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.69 62.0 4.81e-01 98.2% 46.8%
3274280 2004.1.1.200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 0.69 61.0 4.60e-01 98.2% 45.8%
3457573 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.68 62.0 4.59e-01 100.0% 49.6%
5040799 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 62.0 4.97e-01 100.0% 56.3%
None 0.68 62.0 4.58e-01 100.0% 49.6%
5072980 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.68 61.0 4.80e-01 99.1% 48.9%
4585462 2004.1.1.200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 0.68 61.0 4.50e-01 99.1% 43.4%
None 0.68 61.0 4.70e-01 100.0% 47.8%
None 0.67 61.0 4.58e-01 100.0% 51.6%
3606667 7515.1.1.0 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like 0.67 61.0 4.65e-01 100.0% 79.2%
4339055 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 60.0 3.99e-01 98.2% 30.1%
3512712 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 60.0 3.85e-01 99.1% 25.1%
4369824 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.67 59.0 4.60e-01 97.3% 58.2%
4456415 2003.1.1.84 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PRISE 0.67 59.0 4.04e-01 97.3% 49.9%
3946483 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.67 60.0 4.45e-01 100.0% 67.2%
3589232 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 60.0 4.00e-01 99.1% 31.2%
4410716 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 60.0 4.67e-01 100.0% 46.3%
5041095 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.66 46.0 4.32e-01 98.2% 59.3%
4972122 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 60.0 4.96e-01 99.1% 58.5%
2969846 7570.1.1.1 a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C 0.66 43.0 3.90e-01 85.7% 47.7%
3938568 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.66 59.0 4.46e-01 99.1% 85.6%
4677221 2007.1.6.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.66 51.0 5.15e-01 96.4% 81.7%
4274193 2007.1.6.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.65 53.0 5.26e-01 96.4% 84.3%
3187903 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.65 59.0 4.41e-01 100.0% 76.7%
3237223 2004.1.1.47 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › G-alpha 0.65 57.0 4.42e-01 98.2% 85.1%
3953416 129.1.1.70 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › SpnB_Rossmann 0.64 58.0 4.67e-01 100.0% 69.5%
3731093 2003.1.1.201 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short, NAD_binding_4 0.64 58.0 3.57e-01 100.0% 29.0%
3631090 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.64 55.0 4.11e-01 95.5% 67.8%
3274496 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 58.0 4.17e-01 100.0% 41.5%
4217318 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.64 51.0 3.56e-01 85.7% 63.6%
4413958 2007.1.6.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.64 53.0 4.99e-01 97.3% 74.8%
3716513 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 57.0 4.61e-01 98.2% 52.4%
3695908 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.63 49.0 4.00e-01 83.0% 90.5%
3245781 2005.1.1.36 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.63 56.0 4.55e-01 99.1% 68.8%
3182919 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.63 55.0 4.16e-01 98.2% 66.4%
3925641 2005.1.1.36 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.62 56.0 4.89e-01 100.0% 87.1%
1501440 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.62 54.0 4.60e-01 96.4% 78.0%
5080108 2004.1.1.1200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF835 0.61 55.0 4.75e-01 100.0% 80.6%
4562022 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.61 50.0 3.93e-01 90.2% 88.4%
3603768 2484.1.1.24 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 51.0 4.81e-01 93.8% 87.1%
5049163 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.60 51.0 4.56e-01 94.6% 83.6%
3362218 2005.1.1.36 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.60 54.0 4.72e-01 100.0% 87.6%
3989325 2007.1.1.16 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase_5 0.60 54.0 4.07e-01 100.0% 63.3%
None 0.60 53.0 4.23e-01 98.2% 58.2%
1005403 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.59 53.0 5.03e-01 100.0% 86.5%
5034137 7590.1.1.1 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Peptidase_M29 0.58 53.0 4.59e-01 99.1% 71.8%
3947020 2007.1.2.10 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 0.58 51.0 4.83e-01 97.3% 80.0%
4936905 7590.1.1.1 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Peptidase_M29 0.58 52.0 4.57e-01 99.1% 72.4%
4962202 2484.1.1.49 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N 0.58 50.0 4.72e-01 95.5% 87.4%
3287922 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.58 52.0 4.69e-01 98.2% 76.0%
3323999 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 51.0 3.93e-01 99.1% 47.5%
3478500 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 47.0 3.90e-01 90.2% 81.4%
3837994 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.57 51.0 3.22e-01 100.0% 42.7%
3981336 2007.1.2.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_1 0.57 52.0 4.83e-01 100.0% 81.4%
3238720 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.56 48.0 3.71e-01 99.1% 49.5%
3279932 2004.1.1.202 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_28 0.55 49.0 3.91e-01 100.0% 80.4%
3855802 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.55 49.0 3.79e-01 100.0% 51.5%
4520769 7579.1.1.9 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase 0.55 48.0 3.70e-01 99.1% 64.2%
3889847 2004.1.1.118 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 0.55 48.0 3.87e-01 98.2% 53.9%
3285922 2004.1.1.970 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Barstar 0.54 47.0 4.27e-01 100.0% 85.0%
3937335 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 46.0 3.92e-01 96.4% 80.0%
3494357 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 46.0 3.69e-01 98.2% 81.3%
3967964 2488.1.1.12 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrans_RNA 0.51 45.0 3.99e-01 100.0% 91.5%
D5 medium residues 780-870
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7toiA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.84 69.0 5.09e-01 100.0% 36.7%
3p94A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.83 69.0 5.23e-01 100.0% 39.7%
4rshA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.76 56.0 4.48e-01 94.5% 40.0%
1bwpA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.74 59.0 4.44e-01 98.9% 36.3%
4rw0A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.74 58.0 4.54e-01 98.9% 40.8%
5b5lA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.72 56.0 4.21e-01 100.0% 35.7%
3rjtA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.63 56.0 4.16e-01 95.6% 57.5%
5vakA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 47.0 3.01e-01 84.6% 49.9%
1vnsA01 1.20.144.10 Mainly Alpha › Up-down Bundle › Vanadium-containing Chloroperoxidase; domain 1 › Phosphatidic acid phosphatase type 2/haloperoxidase 0.56 47.0 3.84e-01 93.4% 76.0%
3d0cB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 44.0 3.19e-01 93.4% 94.7%
2hcmA01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 36.0 3.15e-01 75.8% 45.6%
7zdtD02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 39.0 2.88e-01 80.2% 43.8%
6aikB00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.51 44.0 3.11e-01 100.0% 87.0%
6umqA01 1.20.930.60 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.50 38.0 3.60e-01 82.4% 99.1%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4999654 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.85 71.0 5.23e-01 100.0% 37.6%
4020091 2007.5.1.0 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.82 71.0 5.03e-01 100.0% 33.9%
4974344 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.81 62.0 4.81e-01 98.9% 40.0%
1411712 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.76 56.0 4.48e-01 94.5% 40.0%
3183799 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.75 70.0 5.02e-01 100.0% 40.4%
3738220 2007.5.1.1 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL 0.73 61.0 4.58e-01 100.0% 39.0%
4018681 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.71 55.0 4.08e-01 100.0% 33.3%
3467750 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 37.0 3.89e-01 96.7% 68.2%
5026112 3457.1.1.0 alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease 0.54 39.0 3.00e-01 90.1% 31.8%
3306744 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.50 42.0 2.64e-01 94.5% 23.2%