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MG592405.1__AUR82190.1__NVP1021C_27__00027
Bact-VirMG592405.1__AUR82190.1__NVP1021C_27__00027
Identity
- Accession:
- MG592405 ↗
- Kingdom:
- phage
Quality
77.7
mean pLDDT
Taxonomy
TaxID: 1881417
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-48
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cegA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.64 | 50.0 | 3.01e-01 | 100.0% | 12.7% |
| 3wirA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.59 | 45.0 | 2.68e-01 | 88.4% | 21.5% |
| 3hdeC00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.59 | 50.0 | 3.42e-01 | 100.0% | 25.6% |
| 1vwxY00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 45.0 | 3.13e-01 | 83.7% | 75.4% |
| 4id8A00 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 39.0 | 3.48e-01 | 72.1% | 89.2% |
| 1u7pD00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.57 | 49.0 | 3.37e-01 | 100.0% | 58.4% |
| 1khiA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 38.0 | 3.29e-01 | 72.1% | 50.0% |
| 1iqzA00 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.15e-01 | 74.4% | 77.8% |
| 6kghA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 44.0 | 2.95e-01 | 100.0% | 53.1% |
| 7z2bK01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 45.0 | 2.73e-01 | 100.0% | 52.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3957844 | 375.1.1.49 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RbpA | 0.70 | 41.0 | 3.49e-01 | 74.4% | 40.0% |
| 3689101 | 7579.1.1.23 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PAF-AH_p_II | 0.68 | 51.0 | 3.00e-01 | 83.7% | 61.7% |
| 3295061 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 44.0 | 3.20e-01 | 74.4% | 32.5% |
| 3468460 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 44.0 | 3.02e-01 | 74.4% | 21.3% |
| 3438608 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 44.0 | 2.90e-01 | 74.4% | 18.9% |
| 3821486 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.62 | 43.0 | 2.97e-01 | 74.4% | 21.3% |
| 3289539 | 150.8.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE | 0.60 | 43.0 | 2.68e-01 | 74.4% | 64.9% |
| 3579413 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 38.0 | 3.94e-01 | 74.4% | 67.5% |
| 4830953 | 101.1.2.9 ↗ | alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV | 0.58 | 52.0 | 3.42e-01 | 100.0% | 37.6% |
| 3692489 | 376.1.4.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog | 0.56 | 45.0 | 4.48e-01 | 100.0% | 84.4% |
| 3721318 | 2484.1.1.110 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE | 0.55 | 41.0 | 3.24e-01 | 79.1% | 45.9% |
| 3229247 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.55 | 44.0 | 2.89e-01 | 100.0% | 44.7% |
| 3322017 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 36.0 | 3.70e-01 | 74.4% | 75.0% |
| 3627201 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.53 | 42.0 | 3.48e-01 | 83.7% | 72.9% |
| 3179147 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.52 | 46.0 | 3.69e-01 | 100.0% | 63.5% |
| 3217862 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.50 | 42.0 | 2.72e-01 | 100.0% | 86.4% |