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MG592405.1__AUR82210.1__NVP1021C_47__00047
Bact-VirMG592405.1__AUR82210.1__NVP1021C_47__00047
Identity
- Accession:
- MG592405 ↗
- Kingdom:
- phage
Quality
71.2
mean pLDDT
Taxonomy
TaxID: 1881417
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 46-133
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1idjA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 69.0 | 4.47e-01 | 96.6% | 47.9% |
| 1pxzA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 68.0 | 4.48e-01 | 96.6% | 30.6% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 70.0 | 5.11e-01 | 100.0% | 72.1% |
| 5gkdA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 66.0 | 4.58e-01 | 96.6% | 35.4% |
| 3n6zA01 | 2.160.20.110 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.73 | 66.0 | 4.67e-01 | 100.0% | 80.4% |
| 8tmsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 65.0 | 4.54e-01 | 100.0% | 73.2% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.72 | 57.0 | 5.51e-01 | 96.6% | 76.3% |
| 2bm5B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.71 | 54.0 | 4.23e-01 | 94.3% | 39.4% |
| 3riqA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.70 | 63.0 | 3.84e-01 | 100.0% | 35.3% |
| 2xt2B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.66 | 52.0 | 4.06e-01 | 97.7% | 38.7% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.64 | 56.0 | 3.95e-01 | 100.0% | 74.1% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 56.0 | 3.48e-01 | 100.0% | 22.0% |
| 3o53A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.61 | 53.0 | 3.70e-01 | 100.0% | 46.2% |
| 2j8iA01 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.61 | 54.0 | 5.14e-01 | 96.6% | 93.1% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 54.0 | 4.39e-01 | 95.5% | 60.1% |
| 1a9nC00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.59 | 50.0 | 4.16e-01 | 100.0% | 92.0% |
| 2j8kA01 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.58 | 49.0 | 4.04e-01 | 96.6% | 54.9% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 50.0 | 4.70e-01 | 96.6% | 88.7% |
| 2moiA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.54 | 34.0 | 3.27e-01 | 86.4% | 51.9% |
| 2cf5A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 42.0 | 3.58e-01 | 89.8% | 63.1% |
| 5wt3A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 38.0 | 3.13e-01 | 79.5% | 43.1% |
| 3ihtA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 39.0 | 3.29e-01 | 98.9% | 46.0% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1546258 | 207.2.1.67 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › LAM55_pectate-like | 0.79 | 70.0 | 4.70e-01 | 95.5% | 28.1% |
| 5034985 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.79 | 66.0 | 4.99e-01 | 94.3% | 40.5% |
| 5043031 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.78 | 67.0 | 4.64e-01 | 94.3% | 40.3% |
| 5045582 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.78 | 67.0 | 4.22e-01 | 93.2% | 19.8% |
| 3192323 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.78 | 68.0 | 4.95e-01 | 96.6% | 42.9% |
| 3381588 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.76 | 68.0 | 4.69e-01 | 95.5% | 40.0% |
| 4981827 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.76 | 71.0 | 5.25e-01 | 100.0% | 61.4% |
| 4981294 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.76 | 70.0 | 5.48e-01 | 100.0% | 78.3% |
| 3965473 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.75 | 69.0 | 5.01e-01 | 100.0% | 60.4% |
| 5020689 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.75 | 68.0 | 4.73e-01 | 100.0% | 64.9% |
| 4981077 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.75 | 69.0 | 4.85e-01 | 100.0% | 50.4% |
| 5027446 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.75 | 66.0 | 4.70e-01 | 95.5% | 45.3% |
| 4969618 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.74 | 68.0 | 4.96e-01 | 100.0% | 68.4% |
| 4981824 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.74 | 68.0 | 4.97e-01 | 100.0% | 58.7% |
| 4968215 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 66.0 | 4.67e-01 | 100.0% | 59.6% |
| 5006606 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.72 | 67.0 | 4.87e-01 | 100.0% | 57.3% |
| 5034080 | 207.2.2.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › beta-helix domain of fiber adhesin | 0.69 | 61.0 | 5.67e-01 | 96.6% | 79.1% |
| 3264291 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.68 | 59.0 | 4.17e-01 | 96.6% | 45.8% |
| 2429370 | 207.13.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix | 0.64 | 57.0 | 3.80e-01 | 98.9% | 35.2% |
| 4969960 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.63 | 54.0 | 5.32e-01 | 94.3% | 88.4% |
| 3936696 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.61 | 51.0 | 3.68e-01 | 94.3% | 32.1% |
| 3268714 | 207.9.1.7 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_3 | 0.61 | 53.0 | 4.03e-01 | 97.7% | 54.2% |
| 3286791 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.61 | 52.0 | 4.83e-01 | 94.3% | 83.6% |
| 4937200 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.60 | 54.0 | 4.52e-01 | 98.9% | 61.3% |
| 4333063 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.60 | 50.0 | 3.47e-01 | 94.3% | 77.5% |
| 3414943 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.59 | 52.0 | 4.10e-01 | 100.0% | 52.3% |
| 5006685 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.58 | 51.0 | 4.35e-01 | 97.7% | 75.0% |
| 4990150 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.57 | 47.0 | 3.21e-01 | 94.3% | 43.0% |