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MG592413.1__AUR82862.1__NVP1029O_29__00029
Bact-VirMG592413.1__AUR82862.1__NVP1029O_29__00029
Identity
- Accession:
- MG592413 ↗
- Kingdom:
- phage
Quality
81.7
mean pLDDT
Taxonomy
TaxID: 1881381
Cluster
View cluster (247 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-128
Domain cluster:
rep: JF974295.1__AGH57514.1__PSYG_00053__00053__D42-120
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.69 | 43.0 | 4.72e-01 | 95.7% | 77.3% |
| 5hmaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 46.0 | 4.82e-01 | 97.8% | 74.7% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 32.0 | 3.77e-01 | 96.8% | 63.1% |
| 6hhuA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 41.0 | 4.39e-01 | 90.3% | 71.8% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.67 | 51.0 | 4.69e-01 | 100.0% | 63.2% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 29.0 | 3.59e-01 | 80.6% | 62.7% |
| 2cg7A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.65 | 28.0 | 3.82e-01 | 91.4% | 80.4% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.61 | 45.0 | 4.32e-01 | 95.7% | 67.0% |
| 1nrkA03 | 2.40.30.160 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 46.0 | 4.22e-01 | 80.6% | 82.0% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.59 | 47.0 | 3.90e-01 | 97.8% | 48.2% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 40.0 | 4.01e-01 | 93.5% | 68.4% |
| 3tfiA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.55 | 41.0 | 2.79e-01 | 81.7% | 26.6% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 42.0 | 4.10e-01 | 98.9% | 76.4% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 36.0 | 3.70e-01 | 93.5% | 71.1% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.53 | 32.0 | 2.20e-01 | 92.5% | 15.7% |
| 4oi3A00 | 3.30.70.3090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ORF SCO4226, nickel-binding ferredoxin-like monomer | 0.53 | 31.0 | 3.26e-01 | 90.3% | 63.0% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.67e-01 | 93.5% | 67.3% |
| 1v4pC01 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.53 | 43.0 | 4.13e-01 | 96.8% | 76.9% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 47.0 | 3.86e-01 | 100.0% | 68.6% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 42.0 | 4.10e-01 | 97.8% | 81.9% |
| 1kyfA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.50 | 35.0 | 3.33e-01 | 73.1% | 75.2% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4952364 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.79 | 51.0 | 5.35e-01 | 94.6% | 71.8% |
| 5001586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.79 | 51.0 | 5.19e-01 | 95.7% | 67.8% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.78 | 50.0 | 5.00e-01 | 95.7% | 64.2% |
| 5026244 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 50.0 | 5.15e-01 | 95.7% | 70.0% |
| 3210962 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 54.0 | 5.40e-01 | 97.8% | 74.7% |
| 3237729 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 52.0 | 4.98e-01 | 94.6% | 64.8% |
| 3289340 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 50.0 | 5.31e-01 | 94.6% | 85.0% |
| 3974181 | 1.1.5.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF29489 | 0.70 | 51.0 | 5.21e-01 | 97.8% | 77.8% |
| 160389 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.68 | 51.0 | 4.63e-01 | 98.9% | 60.2% |
| 2137681 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.66 | 49.0 | 4.63e-01 | 96.8% | 66.1% |
| 3968097 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.66 | 47.0 | 4.49e-01 | 95.7% | 63.6% |
| 3945543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 50.0 | 5.22e-01 | 97.8% | 90.6% |
| 3264338 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 43.0 | 4.41e-01 | 95.7% | 73.3% |
| 3868227 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 43.0 | 4.34e-01 | 94.6% | 69.5% |
| 4682467 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.62 | 42.0 | 4.23e-01 | 95.7% | 69.5% |
| 4946793 | 11.1.1.1392 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Metallophos | 0.61 | 42.0 | 3.88e-01 | 93.5% | 55.0% |
| 3730216 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.60 | 49.0 | 4.98e-01 | 97.8% | 88.9% |
| 3923531 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.59 | 39.0 | 3.01e-01 | 96.8% | 28.6% |
| 3588729 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.57 | 52.0 | 5.20e-01 | 97.8% | 95.8% |
| 3204458 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.57 | 46.0 | 4.65e-01 | 97.8% | 86.3% |
| 3639927 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.56 | 50.0 | 4.75e-01 | 98.9% | 90.9% |
| 4527829 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 39.0 | 3.95e-01 | 96.8% | 73.7% |
| 3267081 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.55 | 43.0 | 4.20e-01 | 100.0% | 77.1% |
| 4016863 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.55 | 48.0 | 4.30e-01 | 98.9% | 90.4% |
| 3809666 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 48.0 | 2.82e-01 | 96.8% | 44.0% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.54 | 47.0 | 4.59e-01 | 96.8% | 99.0% |
| 3890483 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.53 | 47.0 | 3.49e-01 | 100.0% | 79.2% |
| 2048187 | 12.1.1.28 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_106 | 0.53 | 32.0 | 3.33e-01 | 94.6% | 64.0% |
| 5052022 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.52 | 46.0 | 3.93e-01 | 100.0% | 74.7% |
| 3961541 | 11.1.1.315 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MalQ_N | 0.52 | 36.0 | 3.66e-01 | 92.5% | 70.5% |
| 3250648 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.52 | 39.0 | 3.86e-01 | 96.8% | 74.0% |
| 3270183 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.51 | 40.0 | 3.55e-01 | 94.6% | 57.8% |
| 3784816 | 331.9.1.1 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C | 0.51 | 36.0 | 3.27e-01 | 73.1% | 74.4% |
| 4988027 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.50 | 39.0 | 2.78e-01 | 83.9% | 33.6% |