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MG592415.1__AUR83122.1__NVP1031O_140__00140

Bact-Vir

MG592415.1__AUR83122.1__NVP1031O_140__00140

Identity

Accession:
MG592415 ↗
Kingdom:
phage

Quality

84.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.031.O._10N.261.46.F8

TaxID: 1881294

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 44-146
PDB
Domain cluster: rep: MG592420.1__AUR83526.1__NVP1036O_28__00028__D146-238
D2 high residues 162-257
PDB
Domain cluster: rep: MF034659.1__ARV77571.1__X__00007__D301-386
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ej9A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 47.0 3.81e-01 100.0% 98.9%
2eo4A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.52 36.0 3.13e-01 95.8% 45.6%
5dnoA00 3.10.590.10 Alpha Beta › Roll › ph1033 like fold › ph1033 like domains 0.52 40.0 3.39e-01 82.3% 56.1%
3ghgB02 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.51 45.0 3.34e-01 100.0% 80.2%
1lwuC01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.51 45.0 3.95e-01 100.0% 94.7%
1nj1A03 3.30.110.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS 0.51 32.0 3.55e-01 81.2% 84.3%
1orvA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 44.0 3.33e-01 100.0% 58.1%
7bkea01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 30.0 3.30e-01 88.5% 71.6%
1b78A00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.51 39.0 3.20e-01 83.3% 58.7%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.51 30.0 3.46e-01 84.4% 82.4%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4859120 3856.1.2.0 ↗ beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain 0.84 64.0 6.37e-01 79.2% 79.6%
2491358 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.82 77.0 4.84e-01 100.0% 26.4%
2409669 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.80 72.0 4.73e-01 97.9% 30.1%
3623889 1.1.9.8 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › YTH 0.55 38.0 3.29e-01 72.9% 56.9%
5038074 314.1.1.6 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB 0.52 45.0 3.55e-01 100.0% 79.5%
5008475 314.1.1.6 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB 0.51 45.0 3.65e-01 100.0% 90.5%
3568839 304.107.1.1 ↗ a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T 0.51 42.0 2.94e-01 95.8% 26.2%
4879440 2003.1.2.22 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_C 0.50 39.0 3.05e-01 83.3% 66.5%
4190110 269.1.1.2 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C,Fib_alpha 0.50 43.0 2.99e-01 100.0% 59.2%
2083983 269.1.1.2 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C,Fib_alpha 0.50 44.0 3.15e-01 100.0% 66.0%