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MG592422.1__AUR83620.1__NVP1038O_10__00010

Bact-Vir

MG592422.1__AUR83620.1__NVP1038O_10__00010

Identity

Accession:
MG592422 ↗
Kingdom:
phage

Quality

69.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.038.O._10N.286.51.C2

TaxID: 1881298

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-93
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.66 57.0 4.45e-01 100.0% 83.1%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 40.0 4.48e-01 100.0% 80.0%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 43.0 3.54e-01 100.0% 37.6%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 41.0 3.54e-01 100.0% 40.8%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 40.0 4.31e-01 98.7% 77.3%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 39.0 4.50e-01 97.4% 94.2%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.60 34.0 4.38e-01 72.7% 95.7%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 41.0 4.46e-01 90.9% 85.7%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 37.0 4.39e-01 87.0% 95.9%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 36.0 3.85e-01 88.3% 69.6%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.59 39.0 4.39e-01 100.0% 88.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.58 34.0 4.19e-01 94.8% 95.8%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 35.0 4.25e-01 97.4% 96.0%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.57 37.0 3.38e-01 100.0% 49.0%
1iwlA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.57 49.0 3.86e-01 100.0% 75.7%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 36.0 4.07e-01 97.4% 87.5%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.57 35.0 4.16e-01 94.8% 92.3%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 36.0 4.22e-01 97.4% 96.1%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.57 45.0 4.21e-01 87.0% 88.4%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 36.0 3.92e-01 98.7% 78.1%
3u0aA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.57 41.0 2.79e-01 75.3% 43.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 38.0 3.95e-01 100.0% 74.0%
1okeB02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.56 38.0 3.85e-01 100.0% 70.1%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.56 50.0 4.81e-01 100.0% 98.9%
2k4yA00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.56 45.0 4.36e-01 100.0% 77.9%
4u3qB00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.55 48.0 4.49e-01 100.0% 84.8%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.55 39.0 4.20e-01 100.0% 86.6%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.55 36.0 4.23e-01 94.8% 98.1%
2hzmA02 2.20.140.20 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › 0.55 49.0 4.74e-01 100.0% 95.3%
3wmyA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 46.0 3.14e-01 97.4% 71.5%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.54 42.0 3.59e-01 83.1% 84.4%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 37.0 3.82e-01 98.7% 76.1%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.53 39.0 4.14e-01 81.8% 90.9%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 38.0 4.11e-01 100.0% 92.4%
3flpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.26e-01 100.0% 61.3%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.51 39.0 3.66e-01 83.1% 76.5%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.50 39.0 3.58e-01 83.1% 86.3%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.50 41.0 3.21e-01 97.4% 68.7%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3781085 239.3.1.0 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain 0.71 47.0 3.58e-01 72.7% 31.5%
3971267 3794.1.1.2 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCC_alpha_BT 0.65 49.0 4.09e-01 89.6% 48.0%
4342488 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 40.0 4.40e-01 100.0% 76.2%
1482194 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.65 40.0 4.48e-01 100.0% 80.0%
4163851 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 40.0 4.49e-01 100.0% 80.0%
4940673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 42.0 4.79e-01 100.0% 86.7%
4011604 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 44.0 4.45e-01 100.0% 72.0%
4668201 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.64 36.0 4.42e-01 85.7% 88.0%
4499953 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 40.0 4.50e-01 100.0% 83.3%
4009281 219.1.1.65 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like 0.63 41.0 3.69e-01 100.0% 48.6%
4656461 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 39.0 4.35e-01 100.0% 80.0%
1263519 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.63 41.0 4.52e-01 98.7% 82.3%
4029082 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 37.0 4.46e-01 87.0% 90.0%
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 41.0 4.44e-01 100.0% 80.0%
4973749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 44.0 4.67e-01 97.4% 81.4%
4169657 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.62 38.0 4.56e-01 88.3% 94.0%
4451993 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 39.0 4.41e-01 100.0% 83.3%
4058919 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.62 36.0 4.35e-01 87.0% 90.0%
4252943 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.61 36.0 4.30e-01 87.0% 90.0%
3673317 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 38.0 4.43e-01 97.4% 89.1%
4359892 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.61 40.0 4.02e-01 100.0% 65.0%
4053957 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.61 37.0 4.46e-01 97.4% 94.0%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 42.0 4.54e-01 100.0% 84.6%
3788921 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.61 43.0 3.93e-01 72.7% 88.0%
4583465 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.61 36.0 4.26e-01 97.4% 90.0%
5001903 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 43.0 4.52e-01 97.4% 81.4%
3222051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 38.0 4.08e-01 92.2% 75.4%
4585317 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.60 36.0 4.17e-01 97.4% 83.6%
3510526 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 39.0 4.45e-01 100.0% 92.7%
3254492 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.60 53.0 4.37e-01 100.0% 55.1%
3817476 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.60 37.0 4.44e-01 97.4% 96.0%
4170351 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.60 36.0 3.65e-01 98.7% 61.3%
4985969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 40.0 4.48e-01 97.4% 88.3%
3675341 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.60 37.0 4.24e-01 100.0% 87.3%
3218198 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 36.0 4.16e-01 87.0% 85.5%
3590315 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.59 47.0 4.80e-01 100.0% 86.7%
4342110 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 41.0 4.21e-01 100.0% 75.3%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 36.0 3.54e-01 97.4% 56.5%
5018743 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.59 47.0 4.77e-01 100.0% 86.7%
3546607 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.59 35.0 4.22e-01 96.1% 92.0%
5054597 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.59 47.0 4.76e-01 100.0% 86.7%
3436022 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.59 36.0 4.17e-01 100.0% 87.3%
3913334 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 38.0 4.01e-01 98.7% 72.9%
3299797 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.59 37.0 4.11e-01 98.7% 81.7%
3649741 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.59 37.0 3.81e-01 100.0% 66.7%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 38.0 4.38e-01 100.0% 92.7%
3535278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 38.0 4.27e-01 92.2% 86.7%
4953054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 41.0 4.19e-01 97.4% 76.0%
3253595 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.58 50.0 3.88e-01 92.2% 49.0%
5004476 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 38.0 4.12e-01 100.0% 80.0%
3721794 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 38.0 4.28e-01 100.0% 88.3%
3562168 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 38.0 3.64e-01 100.0% 58.9%
3228278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 36.0 3.91e-01 100.0% 76.9%
5012053 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.57 46.0 4.71e-01 100.0% 89.2%
3616243 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 37.0 4.19e-01 100.0% 92.7%
3577864 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.57 37.0 3.66e-01 100.0% 61.2%
3279724 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.57 51.0 4.24e-01 98.7% 65.4%
3998022 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.56 36.0 4.22e-01 96.1% 92.7%
3938389 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 40.0 3.89e-01 100.0% 67.1%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 37.0 3.99e-01 100.0% 80.0%
3420348 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.56 35.0 4.06e-01 97.4% 89.1%
4936291 4.1.1.487 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7205 0.56 41.0 4.41e-01 97.4% 90.8%
3881119 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 38.0 3.77e-01 100.0% 67.5%
3830187 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 36.0 4.10e-01 98.7% 92.7%
3298989 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 36.0 3.18e-01 98.7% 46.4%
5041872 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.55 44.0 4.49e-01 100.0% 88.0%
3671986 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.55 37.0 3.87e-01 93.5% 75.7%
5074749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 37.0 3.92e-01 100.0% 77.1%
3907619 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.55 38.0 3.70e-01 97.4% 64.7%
3037102 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 37.0 4.07e-01 92.2% 85.5%
5033242 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.55 42.0 4.11e-01 81.8% 84.7%
3999723 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 37.0 2.96e-01 100.0% 36.0%
3604145 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 40.0 4.41e-01 96.1% 100.0%
2363 4200.1.1.1 ↗ beta barrels › YmcC-like › YmcC-like › YmcC-like › YjbF 0.50 41.0 3.21e-01 97.4% 68.7%