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MG592425.1__AUR83847.1__NVP1042O_59__00059
Bact-VirMG592425.1__AUR83847.1__NVP1042O_59__00059
Identity
- Accession:
- MG592425 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Taxonomy
TaxID: 1881301
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-48
Domain cluster:
representative
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ew2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.78 | 68.0 | 4.74e-01 | 97.7% | 35.8% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.76 | 59.0 | 4.18e-01 | 88.6% | 53.6% |
| 3d3oA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.75 | 59.0 | 3.93e-01 | 95.5% | 22.2% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.75 | 55.0 | 4.20e-01 | 93.2% | 33.0% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.75 | 63.0 | 4.95e-01 | 97.7% | 46.9% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.75 | 61.0 | 5.08e-01 | 97.7% | 51.9% |
| 3k59A06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.73 | 51.0 | 5.07e-01 | 75.0% | 76.6% |
| 16vpA00 | 1.10.1290.10 | Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) | 0.73 | 64.0 | 3.84e-01 | 100.0% | 52.4% |
| 1u61A00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.73 | 64.0 | 4.56e-01 | 100.0% | 70.1% |
| 1knzA01 | 6.10.280.20 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Rotavirus non-structural protein NSP3, N-terminal domain | 0.73 | 59.0 | 4.65e-01 | 97.7% | 46.1% |
| 1q6hA01 | 1.10.287.460 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain | 0.73 | 59.0 | 4.39e-01 | 88.6% | 36.4% |
| 2janA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.72 | 50.0 | 3.82e-01 | 84.1% | 29.7% |
| 1xx7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.70 | 59.0 | 3.92e-01 | 95.5% | 65.7% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.69 | 55.0 | 4.95e-01 | 95.5% | 82.4% |
| 1gakA00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.69 | 57.0 | 4.16e-01 | 100.0% | 31.4% |
| 4i8oA03 | 1.10.8.1130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial toxin RNase RnlA/LsoA, C-terminal Dmd-binding domain | 0.69 | 54.0 | 4.77e-01 | 97.7% | 58.2% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.69 | 55.0 | 4.29e-01 | 97.7% | 38.4% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.69 | 54.0 | 5.02e-01 | 88.6% | 80.7% |
| 2euiA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.69 | 53.0 | 3.84e-01 | 93.2% | 28.6% |
| 1gnlA01 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.68 | 61.0 | 4.26e-01 | 100.0% | 64.7% |
| 2h92A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 55.0 | 3.57e-01 | 95.5% | 79.6% |
| 3u9rB02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.67 | 54.0 | 3.43e-01 | 100.0% | 16.3% |
| 6qelA01 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.67 | 53.0 | 3.67e-01 | 88.6% | 74.2% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.67 | 56.0 | 4.03e-01 | 100.0% | 35.7% |
| 2yxyA01 | 1.10.287.880 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Hypothetical protein YfhH domain | 0.66 | 50.0 | 4.86e-01 | 81.8% | 88.0% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 50.0 | 4.19e-01 | 86.4% | 46.3% |
| 1wtyA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.66 | 56.0 | 4.16e-01 | 97.7% | 68.1% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 4.26e-01 | 86.4% | 52.0% |
| 2xb4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 46.0 | 3.02e-01 | 79.5% | 34.5% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 48.0 | 3.74e-01 | 90.9% | 34.2% |
| 3wajA03 | 1.20.58.1650 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 52.0 | 3.95e-01 | 88.6% | 58.0% |
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.64 | 50.0 | 4.02e-01 | 95.5% | 43.1% |
| 2k9pA00 | 1.10.287.920 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Pheromone alpha factor receptor. | 0.63 | 42.0 | 3.52e-01 | 70.5% | 66.3% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.63 | 51.0 | 4.27e-01 | 97.7% | 80.5% |
| 7dg2C01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.63 | 46.0 | 4.06e-01 | 84.1% | 49.3% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 47.0 | 4.40e-01 | 81.8% | 80.4% |
| 2bl0C01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.63 | 53.0 | 4.51e-01 | 97.7% | 96.0% |
| 3vkgA15 | 1.10.8.1220 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 50.0 | 4.15e-01 | 100.0% | 62.8% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 46.0 | 3.89e-01 | 77.3% | 50.0% |
| 4rr9A01 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.61 | 48.0 | 3.43e-01 | 88.6% | 56.0% |
| 1o9gA02 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 48.0 | 4.85e-01 | 93.2% | 88.4% |
| 4ofzA01 | 1.20.58.1800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 49.0 | 3.70e-01 | 97.7% | 38.1% |
| 3o2iA00 | 3.30.70.2710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 45.0 | 3.58e-01 | 84.1% | 43.0% |
| 4ezbA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.59 | 52.0 | 3.82e-01 | 97.7% | 43.6% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.59 | 50.0 | 3.26e-01 | 100.0% | 44.0% |
| 3d5lA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 46.0 | 4.45e-01 | 88.6% | 78.8% |
| 4griA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.58 | 42.0 | 4.15e-01 | 93.2% | 75.5% |
| 1p49A02 | 1.10.287.550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.54 | 45.0 | 4.14e-01 | 95.5% | 91.5% |
| 6jrpA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.54 | 46.0 | 4.15e-01 | 97.7% | 96.7% |
| 1y74A00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.54 | 47.0 | 4.30e-01 | 97.7% | 75.4% |
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.53 | 46.0 | 3.80e-01 | 100.0% | 85.0% |
| 1qrvA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.50 | 41.0 | 3.62e-01 | 93.2% | 56.2% |
| 1v8wA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.50 | 42.0 | 2.98e-01 | 100.0% | 51.3% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5045083 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.85 | 76.0 | 4.88e-01 | 100.0% | 24.7% |
| 3703706 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.85 | 78.0 | 4.89e-01 | 100.0% | 22.0% |
| 3961336 | 3781.1.1.0 ↗ | a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain | 0.85 | 68.0 | 5.40e-01 | 97.7% | 44.4% |
| 3953929 | 518.1.1.0 ↗ | alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain | 0.84 | 67.0 | 5.16e-01 | 97.7% | 40.0% |
| 3254341 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.82 | 69.0 | 4.21e-01 | 93.2% | 21.9% |
| 3518933 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.81 | 67.0 | 5.95e-01 | 95.5% | 66.2% |
| 3922168 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.80 | 64.0 | 5.60e-01 | 95.5% | 58.6% |
| 3848681 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.80 | 64.0 | 5.71e-01 | 95.5% | 63.1% |
| 3520427 | 170.1.1.15 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › Retrotran_gag_2 | 0.80 | 69.0 | 5.36e-01 | 100.0% | 45.3% |
| 4559316 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.79 | 63.0 | 5.55e-01 | 95.5% | 58.6% |
| 3222309 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 65.0 | 6.00e-01 | 97.7% | 71.7% |
| 3873692 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.78 | 60.0 | 5.73e-01 | 93.2% | 72.7% |
| 3970080 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.77 | 63.0 | 4.44e-01 | 95.5% | 30.3% |
| 3547329 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.77 | 60.0 | 5.02e-01 | 95.5% | 48.2% |
| 5042877 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.77 | 57.0 | 5.59e-01 | 84.1% | 74.0% |
| 4021559 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.77 | 62.0 | 5.59e-01 | 95.5% | 66.2% |
| 3313301 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.76 | 64.0 | 5.23e-01 | 97.7% | 51.8% |
| 3533067 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.76 | 59.0 | 5.28e-01 | 95.5% | 58.6% |
| 4644218 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.76 | 64.0 | 5.27e-01 | 100.0% | 92.9% |
| 3203949 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 58.0 | 5.38e-01 | 88.6% | 65.0% |
| 3993206 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.76 | 61.0 | 5.36e-01 | 95.5% | 61.4% |
| 3797632 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 58.0 | 5.27e-01 | 95.5% | 63.1% |
| 3629401 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.74 | 59.0 | 5.24e-01 | 95.5% | 61.4% |
| 3622919 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.74 | 58.0 | 4.93e-01 | 95.5% | 51.2% |
| 3787500 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.74 | 59.0 | 4.93e-01 | 95.5% | 51.8% |
| 3798173 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 59.0 | 5.23e-01 | 95.5% | 61.4% |
| 3936163 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.74 | 58.0 | 5.27e-01 | 97.7% | 64.6% |
| 3634198 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 58.0 | 5.22e-01 | 93.2% | 63.1% |
| 4130412 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.73 | 61.0 | 4.97e-01 | 95.5% | 67.1% |
| 3563442 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.73 | 56.0 | 4.92e-01 | 95.5% | 54.7% |
| 3234731 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.73 | 58.0 | 5.24e-01 | 95.5% | 63.1% |
| 4527588 | 3755.1.1.25 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › H-kinase_dim | 0.72 | 51.0 | 3.92e-01 | 79.5% | 32.4% |
| 5055515 | 102.1.1.11 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 | 0.71 | 51.0 | 3.79e-01 | 86.4% | 29.6% |
| 5072566 | 604.4.1.0 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP | 0.71 | 58.0 | 5.16e-01 | 100.0% | 71.4% |
| 3935495 | 101.1.1.357 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ELP3_N | 0.71 | 55.0 | 4.87e-01 | 100.0% | 58.6% |
| 4969306 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 59.0 | 3.71e-01 | 100.0% | 16.6% |
| 3595890 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.69 | 56.0 | 3.87e-01 | 100.0% | 56.7% |
| 3966542 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.69 | 55.0 | 3.49e-01 | 100.0% | 16.8% |
| 4303875 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.68 | 54.0 | 4.43e-01 | 95.5% | 62.2% |
| 3608317 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.67 | 56.0 | 4.73e-01 | 100.0% | 55.0% |
| 3175298 | 130.1.1.51 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Tho1_MOS11_C | 0.67 | 56.0 | 5.12e-01 | 97.7% | 95.0% |
| 3438464 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.67 | 54.0 | 5.26e-01 | 95.5% | 96.0% |
| 3255275 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 50.0 | 4.69e-01 | 95.5% | 65.0% |
| 4024282 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.65 | 46.0 | 4.04e-01 | 86.4% | 47.1% |
| 3362122 | 2004.1.1.44 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PRK | 0.64 | 55.0 | 3.55e-01 | 100.0% | 84.3% |
| 4988046 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 48.0 | 4.67e-01 | 86.4% | 72.0% |
| 4348496 | 101.21.1.1 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N | 0.64 | 45.0 | 3.88e-01 | 86.4% | 43.8% |
| 5047005 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 48.0 | 4.35e-01 | 88.6% | 58.5% |
| 4941755 | 101.18.1.0 ↗ | alpha arrays › HTH › DNA-binding domain of TraM protein › DNA-binding domain of TraM protein | 0.63 | 53.0 | 4.30e-01 | 95.5% | 80.0% |
| 4344886 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.63 | 47.0 | 2.69e-01 | 88.6% | 7.7% |
| 4940432 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 48.0 | 3.97e-01 | 97.7% | 45.6% |
| 185363 | 3297.1.1.1 ↗ | extended segments › Helical hairpin in Ndc80 › Helical hairpin in Ndc80 › Helical hairpin in Ndc80 › DUF5595 | 0.60 | 50.0 | 4.62e-01 | 95.5% | 77.6% |
| 3223068 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.59 | 46.0 | 4.35e-01 | 95.5% | 75.0% |
| 3723084 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.59 | 51.0 | 4.40e-01 | 97.7% | 74.3% |
| 3985755 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.56 | 44.0 | 3.99e-01 | 86.4% | 91.7% |
| 4943264 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.50 | 37.0 | 3.42e-01 | 95.5% | 72.0% |