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MG592441.1__AUR84851.1__NVP1063O_184__00184

Bact-Vir

MG592441.1__AUR84851.1__NVP1063O_184__00184

Identity

Accession:
MG592441 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.063.O._10N.261.45.C7

TaxID: 1881308

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-53
PDB
Domain cluster: representative
CATH (79)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 67.0 5.76e-01 88.1% 90.5%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.82 70.0 6.77e-01 92.9% 91.3%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 73.0 6.60e-01 100.0% 82.1%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 70.0 5.89e-01 100.0% 82.4%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.81 72.0 6.72e-01 100.0% 86.5%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 68.0 6.63e-01 95.2% 100.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 70.0 6.54e-01 100.0% 94.3%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 64.0 5.71e-01 88.1% 94.9%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 68.0 5.54e-01 100.0% 70.4%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 68.0 5.61e-01 100.0% 80.8%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 66.0 5.53e-01 97.6% 74.7%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.78 68.0 6.21e-01 100.0% 77.2%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 68.0 6.63e-01 100.0% 91.5%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 67.0 5.97e-01 97.6% 93.3%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 65.0 5.57e-01 97.6% 78.6%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 66.0 5.93e-01 97.6% 93.2%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.77 66.0 5.53e-01 100.0% 70.7%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 66.0 5.56e-01 100.0% 64.4%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 66.0 5.94e-01 97.6% 91.5%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 5.97e-01 100.0% 80.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 68.0 5.64e-01 100.0% 60.3%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 66.0 5.43e-01 100.0% 69.6%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 65.0 6.15e-01 100.0% 86.5%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 61.0 5.28e-01 88.1% 92.3%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 66.0 5.04e-01 100.0% 47.0%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.76 66.0 6.07e-01 97.6% 83.3%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 66.0 5.08e-01 100.0% 84.4%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 63.0 5.64e-01 97.6% 88.7%
2yrvA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 64.0 4.77e-01 100.0% 48.7%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 61.0 5.65e-01 97.6% 94.8%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 64.0 4.98e-01 100.0% 54.2%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 65.0 5.79e-01 100.0% 91.8%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 66.0 5.32e-01 100.0% 56.2%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 61.0 5.62e-01 97.6% 96.6%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 62.0 5.52e-01 97.6% 87.3%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 60.0 5.55e-01 95.2% 98.2%
4pmwA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 59.0 4.56e-01 85.7% 100.0%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 60.0 5.23e-01 97.6% 77.9%
1yzyA02 3.40.980.20 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › Four-carbon acid sugar kinase, nucleotide binding domain 0.72 51.0 3.37e-01 73.8% 19.1%
2pm9A02 2.20.25.400 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.72 47.0 5.12e-01 88.1% 93.3%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 57.0 5.34e-01 97.6% 96.5%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 60.0 5.41e-01 100.0% 93.4%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 55.0 4.85e-01 88.1% 93.8%
1g5hB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.70 62.0 4.58e-01 100.0% 86.0%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 54.0 4.78e-01 88.1% 90.6%
4wh5A00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.69 48.0 3.23e-01 85.7% 19.6%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 59.0 3.38e-01 97.6% 33.3%
6nhiA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.67 56.0 4.50e-01 95.2% 100.0%
4wi1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.67 57.0 4.14e-01 100.0% 75.6%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.67 57.0 4.35e-01 100.0% 88.5%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 5.48e-01 100.0% 89.6%
2i4lB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.67 55.0 4.26e-01 97.6% 87.1%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 52.0 3.14e-01 92.9% 25.6%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.67 54.0 5.20e-01 97.6% 94.1%
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 53.0 3.15e-01 95.2% 21.5%
3netB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.66 57.0 4.37e-01 100.0% 87.8%
1adjB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.66 56.0 4.38e-01 100.0% 91.5%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 52.0 4.52e-01 100.0% 71.1%
3f8dA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 53.0 3.91e-01 97.6% 95.1%
3iwaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 54.0 3.73e-01 97.6% 42.0%
1httA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.64 55.0 4.25e-01 100.0% 89.8%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.64 52.0 3.14e-01 92.9% 22.4%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 52.0 3.59e-01 97.6% 46.4%
3lzwA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 52.0 3.88e-01 97.6% 96.6%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 50.0 3.86e-01 100.0% 49.6%
3tc9A02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 48.0 2.99e-01 95.2% 24.1%
2j3lA01 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.63 52.0 3.92e-01 100.0% 77.9%
4xcmA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.61 50.0 3.72e-01 100.0% 35.0%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.60 47.0 3.22e-01 100.0% 29.3%
7qzqA01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.60 52.0 3.08e-01 100.0% 25.8%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 44.0 4.10e-01 95.2% 83.6%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.57 40.0 3.81e-01 100.0% 59.6%
2wfbA00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.54 41.0 3.15e-01 92.9% 52.5%
2fbeA00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.54 43.0 2.96e-01 100.0% 54.8%
1twfI01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.53 40.0 3.97e-01 90.5% 91.3%
7qryB01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.53 43.0 3.07e-01 100.0% 65.4%
7qs0A01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.52 41.0 2.89e-01 100.0% 59.5%
5ff5A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 39.0 2.49e-01 88.1% 35.7%
2vszB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 2.90e-01 88.1% 73.5%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3256498 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 80.0 7.24e-01 100.0% 83.6%
3902975 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.88 77.0 6.84e-01 100.0% 93.3%
3501699 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 77.0 6.15e-01 97.6% 57.5%
3849311 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.87 76.0 6.72e-01 97.6% 91.7%
3393360 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.86 77.0 5.49e-01 100.0% 39.1%
3581143 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.86 77.0 6.59e-01 100.0% 70.8%
3921563 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.85 74.0 5.96e-01 97.6% 68.8%
3475965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 74.0 7.24e-01 97.6% 97.8%
3508441 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.84 75.0 5.70e-01 100.0% 50.5%
3241067 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 75.0 5.44e-01 100.0% 46.4%
3231263 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.84 75.0 7.11e-01 100.0% 92.0%
3928262 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 73.0 6.47e-01 97.6% 91.7%
3211839 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 72.0 6.10e-01 97.6% 78.6%
3935130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 73.0 6.67e-01 97.6% 83.6%
3877938 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.84 74.0 5.74e-01 100.0% 52.2%
153172 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.83 74.0 5.72e-01 100.0% 52.2%
3671396 4.1.1.316 ↗ beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.83 73.0 6.05e-01 100.0% 69.9%
3768095 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.83 74.0 5.60e-01 100.0% 49.5%
3547102 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.83 74.0 5.83e-01 100.0% 55.3%
3315100 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 73.0 6.32e-01 100.0% 69.2%
3663761 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 73.0 5.40e-01 100.0% 42.9%
3883165 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 73.0 5.47e-01 100.0% 47.0%
3931993 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 73.0 6.45e-01 100.0% 76.7%
3744277 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 71.0 6.76e-01 100.0% 92.0%
4269256 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.82 72.0 6.34e-01 100.0% 68.3%
3669492 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.82 72.0 4.95e-01 100.0% 32.1%
3547093 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 72.0 5.62e-01 100.0% 52.2%
3635329 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.82 69.0 4.38e-01 95.2% 50.5%
3188732 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 70.0 5.82e-01 97.6% 73.3%
4949773 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.82 71.0 4.88e-01 100.0% 34.5%
4966534 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 67.0 6.41e-01 100.0% 78.0%
3359784 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.82 71.0 6.19e-01 100.0% 69.2%
3835464 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 71.0 6.01e-01 100.0% 64.3%
3395948 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.81 72.0 6.63e-01 100.0% 85.5%
3313119 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.81 71.0 5.74e-01 100.0% 56.2%
3480351 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 69.0 5.72e-01 97.6% 76.0%
3429682 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 70.0 5.82e-01 100.0% 60.0%
3274551 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 72.0 5.90e-01 100.0% 62.7%
3340900 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 70.0 6.10e-01 100.0% 69.2%
3815479 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 70.0 5.78e-01 100.0% 60.0%
3612184 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 68.0 6.12e-01 97.6% 73.3%
3535424 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.80 67.0 5.76e-01 97.6% 78.6%
4957484 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.80 64.0 4.82e-01 88.1% 56.0%
3537417 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 67.0 6.62e-01 97.6% 91.1%
3503771 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 70.0 6.09e-01 100.0% 86.2%
3313139 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.80 69.0 4.54e-01 100.0% 25.7%
3465976 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 70.0 6.05e-01 100.0% 69.2%
4003171 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 68.0 5.54e-01 97.6% 68.8%
3494671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 61.0 6.06e-01 88.1% 80.0%
3707347 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 69.0 6.34e-01 100.0% 81.8%
4082863 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 66.0 5.68e-01 97.6% 78.6%
3373298 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.79 68.0 4.24e-01 100.0% 57.9%
3233511 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 66.0 6.12e-01 97.6% 100.0%
3638396 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.78 70.0 6.18e-01 100.0% 88.3%
3633434 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 66.0 5.65e-01 97.6% 78.6%
3910607 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.78 66.0 5.86e-01 100.0% 87.5%
4168836 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.78 63.0 5.28e-01 88.1% 87.1%
3407827 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 69.0 5.44e-01 100.0% 52.9%
3222195 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.78 65.0 5.74e-01 97.6% 84.6%
4171510 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 66.0 5.40e-01 97.6% 68.8%
4483173 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.78 61.0 5.24e-01 85.7% 90.8%
3828348 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 67.0 5.87e-01 100.0% 69.2%
3498357 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 67.0 5.68e-01 97.6% 78.6%
4950506 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 62.0 4.59e-01 88.1% 52.4%
4167626 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.77 62.0 5.33e-01 88.1% 89.2%
4003123 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 67.0 5.81e-01 97.6% 84.6%
3815480 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 66.0 5.76e-01 100.0% 69.2%
3920103 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 64.0 5.10e-01 97.6% 61.1%
3625911 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 66.0 5.78e-01 100.0% 86.2%
3383283 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.77 60.0 5.24e-01 88.1% 90.8%
3619598 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 63.0 5.12e-01 97.6% 64.7%
3416133 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 65.0 5.44e-01 97.6% 73.3%
3170397 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 65.0 5.28e-01 97.6% 68.8%
3842441 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 63.0 5.64e-01 95.2% 90.0%
3930461 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 64.0 5.41e-01 100.0% 74.7%
3846212 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.76 62.0 5.14e-01 97.6% 68.8%
3890893 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 62.0 5.73e-01 95.2% 100.0%
147681 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 61.0 5.50e-01 97.6% 87.3%
3275623 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 65.0 5.20e-01 100.0% 65.9%
279006 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 62.0 5.37e-01 97.6% 81.2%
3507664 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 60.0 5.48e-01 97.6% 91.7%
3789233 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 60.0 5.30e-01 97.6% 84.6%
5044374 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 55.0 5.04e-01 83.3% 100.0%
4203984 101.8.1.1 ↗ alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f,Anticodon_2 0.71 60.0 3.40e-01 100.0% 8.8%
5014374 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.71 60.0 3.40e-01 100.0% 8.8%
4963768 375.1.1.354 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF28086 0.65 46.0 4.89e-01 78.6% 100.0%
3392762 377.1.1.83 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 0.65 47.0 4.95e-01 78.6% 100.0%
3926623 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.65 51.0 4.49e-01 100.0% 56.2%
3580045 375.1.1.217 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26040 0.64 45.0 4.75e-01 76.2% 97.1%
None — 0.63 48.0 2.94e-01 85.7% 12.5%
3623599 377.1.1.83 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 0.63 45.0 4.73e-01 78.6% 100.0%
4025894 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 44.0 3.38e-01 81.0% 40.4%
3593635 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 47.0 3.73e-01 100.0% 65.5%
4944932 2484.4.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like 0.59 41.0 3.24e-01 78.6% 55.0%
3247046 377.1.1.83 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 0.58 43.0 4.41e-01 88.1% 97.5%
5024226 375.1.1.83 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB 0.57 42.0 4.22e-01 90.5% 86.7%
4972400 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 39.0 3.92e-01 95.2% 97.8%
3519579 295.1.1.20 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Intu_longin_3 0.52 41.0 3.53e-01 100.0% 56.2%
D2 high residues 87-161
PDB
Domain cluster: rep: NC_047948.1__YP_009799981.1__HOT02_gp141__00140__D1-84
D3 high residues 164-261
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 43.0 2.86e-01 72.4% 75.5%
3spdA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.56 41.0 3.17e-01 74.5% 52.0%
2prxA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 34.0 3.25e-01 94.9% 52.6%
5ymrC00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.54 48.0 2.87e-01 100.0% 58.8%
2y8nA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.53 47.0 2.79e-01 100.0% 59.0%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 37.0 3.09e-01 71.4% 84.5%
2zylA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.53 30.0 2.68e-01 88.8% 38.5%
3nm6B00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.52 37.0 2.88e-01 74.5% 98.7%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.52 38.0 2.83e-01 76.5% 66.0%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 3.42e-01 74.5% 88.5%
3kf6A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.24e-01 72.4% 96.3%
4uoyA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 36.0 2.89e-01 74.5% 42.0%
3uxuA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.51 36.0 3.09e-01 73.5% 81.1%
2qgaB03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.50 32.0 3.77e-01 90.8% 95.5%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5062942 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.74 41.0 5.24e-01 79.6% 96.4%
5038003 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.73 38.0 5.19e-01 81.6% 100.0%
3949336 220.1.1.216 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Helicase_IV_N 0.64 38.0 3.68e-01 73.5% 52.7%
3333293 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 38.0 4.19e-01 82.7% 80.0%
4978704 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 42.0 3.73e-01 76.5% 99.3%
5051941 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 40.0 3.55e-01 71.4% 99.3%
3711833 7015.1.1.0 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.55 43.0 3.58e-01 89.8% 48.5%
3282813 268.1.1.0 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.55 24.0 2.59e-01 89.8% 43.8%
4024043 223.2.1.19 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.55 39.0 3.27e-01 75.5% 93.1%
3303368 109.4.1.37 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BRO1 0.55 49.0 3.30e-01 100.0% 31.1%
4943575 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 37.0 3.27e-01 70.4% 67.1%
5076775 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 37.0 3.39e-01 72.4% 76.2%
3781907 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 37.0 3.30e-01 73.5% 64.1%
5052919 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 38.0 3.29e-01 75.5% 94.0%
4977349 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 38.0 3.31e-01 77.6% 92.3%
4996383 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 35.0 3.18e-01 72.4% 72.6%
3741860 223.2.1.7 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.50 35.0 3.24e-01 72.4% 70.8%