←Back to structures
MG592444.1__AUR85048.1__NVP1067O_36__00036
Bact-VirMG592444.1__AUR85048.1__NVP1067O_36__00036
Identity
- Accession:
- MG592444 ↗
- Kingdom:
- phage
Quality
52.5
mean pLDDT
Taxonomy
TaxID: 1881310
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-110
Domain cluster:
rep: ON968454.1__UXO93936.1__Pan3_14__00015__D3-92
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09008.16 best | Head_binding | 29.9 | 8.10e-07 | 91.8% | 65.5% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lktA00 | 2.170.14.10 | Mainly Beta › Beta Complex › Tailspike Protein; Chain › Phage P22 tailspike-like, N-terminal domain | 0.90 | 79.0 | 7.74e-01 | 100.0% | 85.6% |
| 6ixyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 52.0 | 4.65e-01 | 100.0% | 60.3% |
| 2w1nA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 41.0 | 4.37e-01 | 100.0% | 78.0% |
| 3vgfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 41.0 | 4.36e-01 | 100.0% | 82.4% |
| 3vvvA00 | 2.60.40.2840 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 42.0 | 4.09e-01 | 100.0% | 69.4% |
| 5c86A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 42.0 | 4.16e-01 | 100.0% | 74.3% |
| 1bpvA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 4.09e-01 | 100.0% | 72.1% |
| 5umsA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 30.0 | 2.99e-01 | 100.0% | 48.0% |
| 7clyA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.56 | 50.0 | 4.13e-01 | 100.0% | 59.7% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 4.56e-01 | 99.0% | 89.1% |
| 2zkmX04 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 42.0 | 3.87e-01 | 100.0% | 60.8% |
| 4k4kA01 | 2.60.40.2620 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like | 0.54 | 49.0 | 4.49e-01 | 100.0% | 79.5% |
| 3h41A03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.54 | 36.0 | 3.37e-01 | 89.7% | 53.2% |
| 4qt6A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.53 | 43.0 | 3.74e-01 | 90.7% | 81.8% |
| 3b2dC00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 43.0 | 3.82e-01 | 100.0% | 63.3% |
| 4jcwA02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.51 | 39.0 | 4.09e-01 | 94.8% | 88.9% |
| 1dfxA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.51 | 40.0 | 3.70e-01 | 100.0% | 65.6% |
| 1mzpA01 | 3.30.190.20 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribosomal protein L1/L10, rRNA-binding domain | 0.51 | 45.0 | 4.19e-01 | 100.0% | 93.7% |
| 6i6rB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 4.16e-01 | 100.0% | 88.9% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 38.0 | 3.41e-01 | 97.9% | 57.8% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3000872 | 3857.1.1.1 ↗ | beta sandwiches › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head_binding | 0.90 | 79.0 | 7.22e-01 | 100.0% | 73.6% |
| 3075186 | 3857.1.1.1 ↗ | beta sandwiches › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head_binding | 0.89 | 78.0 | 7.41e-01 | 100.0% | 80.2% |
| 4089566 | 3857.1.1.1 ↗ | beta sandwiches › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head-binding domain of phage P22 tailspike protein › Head_binding | 0.78 | 66.0 | 6.72e-01 | 91.8% | 91.6% |
| 4959054 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 42.0 | 4.49e-01 | 100.0% | 72.9% |
| 2163571 | 11.1.4.36 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA | 0.66 | 51.0 | 4.51e-01 | 100.0% | 56.6% |
| 4295923 | 11.1.4.25 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C | 0.65 | 41.0 | 4.41e-01 | 100.0% | 72.9% |
| 4958378 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.65 | 42.0 | 4.52e-01 | 100.0% | 75.3% |
| 5062141 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.62 | 40.0 | 4.13e-01 | 100.0% | 70.0% |
| 4972027 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 45.0 | 4.43e-01 | 100.0% | 73.3% |
| 5058228 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 41.0 | 4.10e-01 | 100.0% | 68.9% |
| 3230431 | 11.2.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK-C2 | 0.58 | 53.0 | 4.19e-01 | 100.0% | 52.8% |
| 3609899 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 45.0 | 3.78e-01 | 100.0% | 50.6% |
| 3727030 | 11.1.5.20 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › NDT80_PhoG | 0.57 | 50.0 | 4.00e-01 | 100.0% | 93.5% |
| 3393502 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 38.0 | 3.90e-01 | 100.0% | 71.6% |
| 3778422 | 11.2.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK-C2 | 0.56 | 50.0 | 4.01e-01 | 100.0% | 53.8% |
| 4621143 | 11.1.1.248 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › bMG6 | 0.55 | 46.0 | 4.25e-01 | 100.0% | 70.4% |
| 5022780 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 50.0 | 4.95e-01 | 99.0% | 96.0% |
| 3603390 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 42.0 | 4.53e-01 | 100.0% | 92.9% |
| 3862972 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.55 | 42.0 | 2.73e-01 | 100.0% | 16.9% |
| 3566293 | 3774.1.1.11 ↗ | extended segments › Fibroblast growth factor receptor 3 transmembrane domain › Fibroblast growth factor receptor 3 transmembrane domain › Fibroblast growth factor receptor 3 transmembrane domain › CUB_CDCP1_4th | 0.54 | 35.0 | 3.86e-01 | 79.4% | 84.0% |
| 4129157 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 40.0 | 3.72e-01 | 100.0% | 62.5% |
| 3275146 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.54 | 44.0 | 4.57e-01 | 100.0% | 94.4% |
| 1277063 | 11.1.4.22 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa_like_1 | 0.54 | 49.0 | 4.49e-01 | 100.0% | 79.5% |
| 4466937 | 11.1.1.248 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › bMG6 | 0.54 | 45.0 | 4.08e-01 | 100.0% | 67.7% |
| 3405662 | 11.1.1.822 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 | 0.53 | 43.0 | 4.52e-01 | 99.0% | 94.4% |
| 4467696 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.53 | 43.0 | 3.75e-01 | 100.0% | 58.0% |
| 3511056 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.51 | 41.0 | 3.33e-01 | 88.7% | 86.7% |
| 3973711 | 11.1.1.1036 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30407 | 0.51 | 39.0 | 4.16e-01 | 100.0% | 92.9% |
| 3229955 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.50 | 36.0 | 3.25e-01 | 77.3% | 97.9% |
D2
high
residues 124-238
Domain cluster:
rep: MG592420.1__AUR83526.1__NVP1036O_28__00028__D146-238
D3
medium
residues 253-364
D4
medium
residues 365-532
D5
medium
residues 533-721
D6
medium
residues 722-835_853-893