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MG592444.1__AUR85072.1__NVP1067O_60__00060
Bact-VirMG592444.1__AUR85072.1__NVP1067O_60__00060
Identity
- Accession:
- MG592444 ↗
- Kingdom:
- phage
Quality
68.0
mean pLDDT
Taxonomy
TaxID: 1881310
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-106
D2
high
residues 133-201
Domain cluster:
rep: MG592665.1__AUS02216.1__NVP2095B_58__00058__D10-78
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6h9xA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.88 | 65.0 | 5.58e-01 | 81.2% | 52.0% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.86 | 66.0 | 6.40e-01 | 81.2% | 72.7% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.84 | 57.0 | 5.99e-01 | 88.4% | 76.6% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 63.0 | 5.51e-01 | 81.2% | 56.9% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.82 | 61.0 | 5.71e-01 | 79.7% | 85.9% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.81 | 74.0 | 5.41e-01 | 98.6% | 60.1% |
| 1rq0A01 | 6.10.140.160 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 62.0 | 5.82e-01 | 82.6% | 69.9% |
| 3bvoA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.79 | 59.0 | 5.48e-01 | 100.0% | 62.8% |
| 5dn6J00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.78 | 58.0 | 5.73e-01 | 79.7% | 79.7% |
| 1q6aA00 | 1.10.1240.30 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain | 0.77 | 53.0 | 4.51e-01 | 85.5% | 45.8% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.77 | 49.0 | 3.73e-01 | 91.3% | 30.2% |
| 3nyjA00 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.75 | 64.0 | 4.75e-01 | 95.7% | 66.3% |
| 2yw6B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.75 | 55.0 | 4.22e-01 | 76.8% | 36.0% |
| 2o8pA00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.75 | 68.0 | 4.71e-01 | 100.0% | 34.2% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 55.0 | 5.32e-01 | 82.6% | 74.7% |
| 4dvyP03 | 1.20.120.1270 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CagA exotoxin domain III | 0.68 | 60.0 | 4.56e-01 | 98.6% | 70.1% |
| 2fsfB04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.68 | 59.0 | 4.23e-01 | 100.0% | 67.5% |
| 4gf0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.67 | 46.0 | 3.94e-01 | 72.5% | 50.4% |
| 3owaB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.66 | 57.0 | 4.44e-01 | 100.0% | 78.3% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 52.0 | 4.57e-01 | 92.8% | 75.7% |
| 3geeA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.63 | 58.0 | 4.28e-01 | 100.0% | 42.3% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 44.0 | 4.02e-01 | 100.0% | 71.3% |
| 1hr7C02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.50 | 45.0 | 3.14e-01 | 100.0% | 56.4% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3732397 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.87 | 67.0 | 5.46e-01 | 81.2% | 70.0% |
| 3427778 | 604.1.1.144 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF26575 | 0.86 | 67.0 | 6.41e-01 | 100.0% | 72.5% |
| 3737296 | 192.2.1.18 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING | 0.85 | 64.0 | 5.14e-01 | 79.7% | 53.1% |
| 3574069 | 604.12.1.62 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DuoxA | 0.85 | 65.0 | 5.24e-01 | 84.1% | 44.8% |
| 3595968 | 605.2.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 | 0.82 | 64.0 | 6.11e-01 | 94.2% | 71.2% |
| 1954342 | 3826.1.1.1 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal | 0.81 | 66.0 | 6.04e-01 | 88.4% | 76.4% |
| 3877354 | 3291.1.1.14 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › LAP2alpha | 0.80 | 73.0 | 5.16e-01 | 98.6% | 57.4% |
| 3720763 | 5086.1.1.169 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › NCA2 | 0.78 | 60.0 | 4.47e-01 | 82.6% | 67.6% |
| 3177741 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.77 | 56.0 | 4.89e-01 | 81.2% | 52.0% |
| 3241687 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.77 | 70.0 | 5.86e-01 | 100.0% | 60.0% |
| 3908662 | 109.4.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 | 0.75 | 68.0 | 4.56e-01 | 98.6% | 29.6% |
| 5058780 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.74 | 65.0 | 5.70e-01 | 100.0% | 75.2% |
| 5055314 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.73 | 53.0 | 4.88e-01 | 76.8% | 60.0% |
| 3215718 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.72 | 52.0 | 4.98e-01 | 89.9% | 66.3% |
| 3210369 | 603.1.1.108 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27599 | 0.70 | 64.0 | 5.11e-01 | 100.0% | 63.1% |
| 5035050 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.70 | 59.0 | 5.33e-01 | 100.0% | 68.4% |
| 3261693 | 601.37.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Photosystem II lipoprotein Psb27 › Photosystem II lipoprotein Psb27 | 0.67 | 56.0 | 4.78e-01 | 100.0% | 55.0% |
| 3630574 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.66 | 59.0 | 5.30e-01 | 100.0% | 82.1% |
| 3544351 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 53.0 | 3.35e-01 | 100.0% | 16.0% |
| 3495073 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.61 | 52.0 | 4.55e-01 | 100.0% | 64.5% |