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MG592447.1__AUR85228.1__NVP1070O_64__00064
Bact-VirMG592447.1__AUR85228.1__NVP1070O_64__00064
Identity
- Accession:
- MG592447 ↗
- Kingdom:
- phage
Quality
65.0
mean pLDDT
Taxonomy
TaxID: 2070719
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-61
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dk6A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.66 | 47.0 | 4.08e-01 | 83.6% | 48.9% |
| 1ujrA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.66 | 48.0 | 4.38e-01 | 78.7% | 59.0% |
| 3dgpA00 | 3.30.70.2610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 33.0 | 3.36e-01 | 95.1% | 46.8% |
| 2ctdA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.64 | 41.0 | 3.63e-01 | 82.0% | 42.7% |
| 4iduB01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.63 | 53.0 | 4.28e-01 | 98.4% | 56.7% |
| 1x4rA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.63 | 47.0 | 4.38e-01 | 82.0% | 67.1% |
| 4bgpA01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.62 | 52.0 | 4.21e-01 | 98.4% | 56.7% |
| 3v97A03 | 3.30.750.80 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like | 0.62 | 50.0 | 4.55e-01 | 91.8% | 72.9% |
| 3zlaD01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.60 | 50.0 | 4.07e-01 | 98.4% | 57.1% |
| 7q5yB01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.57 | 42.0 | 3.46e-01 | 80.3% | 69.2% |
| 1zuoB00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.56 | 46.0 | 3.66e-01 | 96.7% | 55.7% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 39.0 | 3.95e-01 | 98.4% | 78.0% |
| 6mptA01 | 3.30.420.590 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.55 | 45.0 | 3.31e-01 | 91.8% | 43.2% |
| 4uhiA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.55 | 45.0 | 2.80e-01 | 98.4% | 69.4% |
| 2jhjA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.55 | 38.0 | 3.15e-01 | 73.8% | 41.7% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 38.0 | 2.59e-01 | 77.0% | 33.2% |
| 1xjhA00 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.55 | 41.0 | 4.10e-01 | 85.2% | 83.9% |
| 2z99A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 39.0 | 3.51e-01 | 83.6% | 54.0% |
| 3nuhB02 | 3.30.300.370 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.54 | 46.0 | 3.78e-01 | 100.0% | 82.6% |
| 1u6gC00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 43.0 | 2.37e-01 | 91.8% | 7.8% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.53 | 40.0 | 3.46e-01 | 86.9% | 51.0% |
| 4l80D00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.52 | 40.0 | 2.53e-01 | 85.2% | 27.6% |
| 1go4A00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.52 | 41.0 | 3.00e-01 | 93.4% | 93.4% |
| 5wzoA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.52 | 41.0 | 3.35e-01 | 90.2% | 73.2% |
| 1t6sA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 3.21e-01 | 72.1% | 51.2% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.51 | 40.0 | 3.47e-01 | 91.8% | 70.5% |
| 2i0zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 2.86e-01 | 98.4% | 96.5% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 39.0 | 3.42e-01 | 90.2% | 83.5% |
| 2pg4A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 35.0 | 3.18e-01 | 75.4% | 72.5% |
| 2gzaA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 39.0 | 3.29e-01 | 86.9% | 92.6% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5022626 | 4203.1.1.0 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like | 0.69 | 46.0 | 4.65e-01 | 73.8% | 70.0% |
| 3648830 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 45.0 | 4.13e-01 | 78.7% | 100.0% |
| 4931058 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 52.0 | 3.90e-01 | 100.0% | 57.6% |
| 224425 | 3644.1.1.2 ↗ | alpha complex topology › Leanyer virus nucleoprotein-related › Leanyer virus nucleoprotein-related › Leanyer virus nucleoprotein-related › Bunya_nucleocap | 0.62 | 51.0 | 3.53e-01 | 98.4% | 30.8% |
| 4967607 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 51.0 | 3.96e-01 | 100.0% | 58.1% |
| 3236407 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.61 | 49.0 | 4.26e-01 | 88.5% | 57.9% |
| 5031247 | 3755.3.1.127 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › NFACT_N | 0.61 | 51.0 | 3.86e-01 | 100.0% | 58.2% |
| 4975931 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.61 | 51.0 | 3.83e-01 | 100.0% | 58.2% |
| 3980132 | 823.1.1.1 ↗ | a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › gpW | 0.60 | 43.0 | 4.45e-01 | 80.3% | 83.6% |
| 4964968 | 192.2.1.88 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › NFACT_N | 0.60 | 49.0 | 3.80e-01 | 100.0% | 60.6% |
| 5071736 | 2004.1.1.277 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › HerA_C | 0.58 | 40.0 | 2.46e-01 | 72.1% | 13.9% |
| 3385422 | 109.4.1.337 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ipi1_N | 0.58 | 46.0 | 2.66e-01 | 86.9% | 14.9% |
| 5041715 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 47.0 | 4.06e-01 | 100.0% | 61.8% |
| 5026112 | 3457.1.1.0 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease | 0.56 | 43.0 | 3.06e-01 | 88.5% | 56.4% |
| 3581477 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 38.0 | 4.14e-01 | 85.2% | 100.0% |
| 5024500 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.55 | 45.0 | 3.94e-01 | 100.0% | 72.4% |
| 4565985 | 5051.1.1.3 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF | 0.55 | 41.0 | 2.50e-01 | 83.6% | 54.2% |
| 4022379 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.55 | 45.0 | 3.54e-01 | 98.4% | 100.0% |
| 3955679 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.55 | 39.0 | 3.49e-01 | 83.6% | 52.2% |
| 4096141 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.54 | 45.0 | 3.98e-01 | 93.4% | 91.1% |
| 3920157 | 109.4.1.2709 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, HEAT_GCN1 | 0.54 | 41.0 | 2.35e-01 | 83.6% | 19.7% |
| 5078617 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 37.0 | 3.22e-01 | 100.0% | 46.3% |
| 3346100 | 109.4.1.1544 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1 | 0.53 | 43.0 | 2.34e-01 | 91.8% | 7.9% |
| 3728013 | 109.4.1.1940 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1, PF28359 | 0.53 | 39.0 | 2.12e-01 | 82.0% | 10.7% |
| 3263125 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 45.0 | 3.26e-01 | 100.0% | 75.6% |
| 3873955 | 7016.1.1.0 ↗ | extended segments › Palmitoyltransferase DHHC C-terminal domain › Palmitoyltransferase DHHC C-terminal domain › Palmitoyltransferase DHHC C-terminal domain | 0.52 | 44.0 | 3.40e-01 | 100.0% | 41.9% |
| 5049696 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 41.0 | 2.92e-01 | 95.1% | 59.1% |
| 3952617 | 101.1.2.508 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25872 | 0.52 | 36.0 | 3.14e-01 | 77.0% | 46.0% |
| 4392601 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.52 | 38.0 | 3.61e-01 | 80.3% | 90.4% |
| 4636695 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.51 | 36.0 | 3.52e-01 | 75.4% | 98.5% |
| 3724558 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.51 | 42.0 | 3.86e-01 | 95.1% | 95.3% |
| 4598960 | 304.36.1.0 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like | 0.51 | 36.0 | 3.50e-01 | 75.4% | 100.0% |
| 5061619 | 1075.1.1.3 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 | 0.51 | 43.0 | 2.88e-01 | 100.0% | 31.1% |
| 3808578 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 44.0 | 4.15e-01 | 98.4% | 98.6% |
| 2705 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.51 | 35.0 | 3.22e-01 | 72.1% | 51.8% |
| 3234976 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 38.0 | 3.25e-01 | 100.0% | 46.4% |
| 3721314 | 219.1.1.93 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 | 0.51 | 40.0 | 3.41e-01 | 91.8% | 97.4% |
| 5054944 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.51 | 40.0 | 2.82e-01 | 93.4% | 35.0% |
| 3227786 | 109.4.1.548 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120 | 0.51 | 45.0 | 2.54e-01 | 100.0% | 43.0% |
| 3749051 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.51 | 43.0 | 2.92e-01 | 100.0% | 25.4% |
| 4026547 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 42.0 | 2.77e-01 | 100.0% | 24.4% |
| 5029669 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.50 | 41.0 | 3.36e-01 | 93.4% | 82.5% |
| 5014663 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.50 | 42.0 | 2.72e-01 | 100.0% | 30.9% |
D2
medium
residues 62-124